Literature DB >> 22352658

Phasor imaging with a widefield photon-counting detector.

Ryan A Colyer1, Oswald H W Siegmund, Anton S Tremsin, John V Vallerga, Shimon Weiss, Xavier Michalet.   

Abstract

Fluorescence lifetime can be used as a contrast mechanism to distinguish fluorophores for localization or tracking, for studying molecular interactions, binding, assembly, and aggregation, or for observing conformational changes via Förster resonance energy transfer (FRET) between donor and acceptor molecules. Fluorescence lifetime imaging microscopy (FLIM) is thus a powerful technique but its widespread use has been hampered by demanding hardware and software requirements. FLIM data is often analyzed in terms of multicomponent fluorescence lifetime decays, which requires large signals for a good signal-to-noise ratio. This confines the approach to very low frame rates and limits the number of frames which can be acquired before bleaching the sample. Recently, a computationally efficient and intuitive graphical representation, the phasor approach, has been proposed as an alternative method for FLIM data analysis at the ensemble and single-molecule level. In this article, we illustrate the advantages of combining phasor analysis with a widefield time-resolved single photon-counting detector (the H33D detector) for FLIM applications. In particular we show that phasor analysis allows real-time subsecond identification of species by their lifetimes and rapid representation of their spatial distribution, thanks to the parallel acquisition of FLIM information over a wide field of view by the H33D detector. We also discuss possible improvements of the H33D detector's performance made possible by the simplicity of phasor analysis and its relaxed timing accuracy requirements compared to standard time-correlated single-photon counting (TCSPC) methods.

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Year:  2012        PMID: 22352658      PMCID: PMC3380817          DOI: 10.1117/1.JBO.17.1.016008

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  44 in total

1.  Fluorescence lifetime imaging by time-correlated single-photon counting.

Authors:  W Becker; A Bergmann; M A Hink; K König; K Benndorf; C Biskup
Journal:  Microsc Res Tech       Date:  2004-01-01       Impact factor: 2.769

2.  The phasor approach to fluorescence lifetime imaging analysis.

Authors:  Michelle A Digman; Valeria R Caiolfa; Moreno Zamai; Enrico Gratton
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

3.  Rapid frequency-domain FLIM spinning disk confocal microscope: lifetime resolution, image improvement and wavelet analysis.

Authors:  Chittanon Buranachai; Daichi Kamiyama; Akira Chiba; Benjamin D Williams; Robert M Clegg
Journal:  J Fluoresc       Date:  2008-03-07       Impact factor: 2.217

4.  A novel fluorescence lifetime imaging system that optimizes photon efficiency.

Authors:  Ryan A Colyer; Claudia Lee; Enrico Gratton
Journal:  Microsc Res Tech       Date:  2008-03       Impact factor: 2.769

5.  mhFLIM: resolution of heterogeneous fluorescence decays in widefield lifetime microscopy.

Authors:  S Schlachter; A D Elder; A Esposito; G S Kaminski; J H Frank; L K van Geest; C F Kaminski
Journal:  Opt Express       Date:  2009-02-02       Impact factor: 3.894

6.  Global analysis of time correlated single photon counting FRET-FLIM data.

Authors:  Hernan E Grecco; Pedro Roda-Navarro; Peter J Verveer
Journal:  Opt Express       Date:  2009-04-13       Impact factor: 3.894

7.  Microchannel Plate Imaging Photon Counters for Ultraviolet through NIR Detection with High Time Resolution.

Authors:  Oswald H W Siegmund; John V Vallerga; Anton S Tremsin; Jason McPhate; X Michalet; R A Colyer; S Weiss
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-05-12

8.  Fast fluorescence lifetime imaging of calcium in living cells.

Authors:  A V Agronskaia; L Tertoolen; H C Gerritsen
Journal:  J Biomed Opt       Date:  2004 Nov-Dec       Impact factor: 3.170

9.  Dynamic partitioning of a glycosyl-phosphatidylinositol-anchored protein in glycosphingolipid-rich microdomains imaged by single-quantum dot tracking.

Authors:  Fabien Pinaud; Xavier Michalet; Gopal Iyer; Emmanuel Margeat; Hsiao-Ping Moore; Shimon Weiss
Journal:  Traffic       Date:  2009-03-27       Impact factor: 6.215

10.  Calcium imaging using fluorescence lifetimes and long-wavelength probes.

Authors:  J R Lakowicz; H Szmacinski; M L Johnson
Journal:  J Fluoresc       Date:  1992-03       Impact factor: 2.217

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  12 in total

Review 1.  Development of new photon-counting detectors for single-molecule fluorescence microscopy.

Authors:  X Michalet; R A Colyer; G Scalia; A Ingargiola; R Lin; J E Millaud; S Weiss; Oswald H W Siegmund; Anton S Tremsin; John V Vallerga; A Cheng; M Levi; D Aharoni; K Arisaka; F Villa; F Guerrieri; F Panzeri; I Rech; A Gulinatti; F Zappa; M Ghioni; S Cova
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-12-24       Impact factor: 6.237

2.  Architecture and applications of a high resolution gated SPAD image sensor.

Authors:  Samuel Burri; Yuki Maruyama; Xavier Michalet; Francesco Regazzoni; Claudio Bruschini; Edoardo Charbon
Journal:  Opt Express       Date:  2014-07-14       Impact factor: 3.894

3.  Parallel excitation-emission multiplexed fluorescence lifetime confocal microscopy for live cell imaging.

Authors:  Ming Zhao; Yu Li; Leilei Peng
Journal:  Opt Express       Date:  2014-05-05       Impact factor: 3.894

4.  In vitro and in vivo phasor analysis of stoichiometry and pharmacokinetics using short-lifetime near-infrared dyes and time-gated imaging.

Authors:  Sez-Jade Chen; Nattawut Sinsuebphon; Alena Rudkouskaya; Margarida Barroso; Xavier Intes; Xavier Michalet
Journal:  J Biophotonics       Date:  2018-12-09       Impact factor: 3.207

5.  AlliGator: A Phasor Computational Platform for Fast in vivo Lifetime Analysis.

Authors:  Sez-Jade Chen; Nattawut Sinsuebphon; Margarida Barroso; Xavier Intes; Xavier Michalet
Journal:  Opt Mol Probes Imaging Drug Deliv       Date:  2017-04

6.  In vitro and in vivo NIR fluorescence lifetime imaging with a time-gated SPAD camera.

Authors:  Jason T Smith; Alena Rudkouskaya; Shan Gao; Juhi M Gupta; Arin Ulku; Claudio Bruschini; Edoardo Charbon; Shimon Weiss; Margarida Barroso; Xavier Intes; Xavier Michalet
Journal:  Optica       Date:  2022-05-09       Impact factor: 10.644

7.  Developing and Testing a Bayesian Analysis of Fluorescence Lifetime Measurements.

Authors:  Bryan Kaye; Peter J Foster; Tae Yeon Yoo; Daniel J Needleman
Journal:  PLoS One       Date:  2017-01-06       Impact factor: 3.240

8.  Design Rules for Membrane-Embedded Voltage-Sensing Nanoparticles.

Authors:  Kyoungwon Park; Shimon Weiss
Journal:  Biophys J       Date:  2017-02-28       Impact factor: 4.033

9.  A method to quantify FRET stoichiometry with phasor plot analysis and acceptor lifetime ingrowth.

Authors:  WeiYue Chen; Edward Avezov; Simon C Schlachter; Fabrice Gielen; Romain F Laine; Heather P Harding; Florian Hollfelder; David Ron; Clemens F Kaminski
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

Review 10.  Application of FRET probes in the analysis of neuronal plasticity.

Authors:  Yoshibumi Ueda; Showming Kwok; Yasunori Hayashi
Journal:  Front Neural Circuits       Date:  2013-10-10       Impact factor: 3.492

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