Literature DB >> 22347139

(E)-2-[4-(Trifluoro-meth-yl)benzyl-idene]-2,3-dihydro-1H-inden-1-one.

Ang Chee Wei, Mohamed Ashraf Ali, Tan Soo Choon, Ibrahim Abdul Razak, Suhana Arshad.   

Abstract

In the title mol-ecule, C(17)H(11)F(3)O, the indan ring system and the trifluoro-methyl-substituted benzene ring are approximately individually planar and form a dihedral angle of 1.81 (5)° with each other. In the crystal, mol-ecules are linked by pairs of weak bifurcated (C-H)(2)⋯O hydrogen bonds to form centrosymmetric dimers, generating R(2) (1)(6) and R(2) (2)(10) ring motifs. These dimers are connected by further weak C-H⋯O hydrogen bonds into one-dimensional chains along the b axis. Weak C-H⋯π inter-actions are also present.

Entities:  

Year:  2012        PMID: 22347139      PMCID: PMC3275283          DOI: 10.1107/S1600536812003157

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of chalcone compounds, see: Gurubasavaraja Swamy & Agasimundin (2008 ▶); Shibata (1994 ▶); Charris et al. (2007 ▶); Sharma et al. (2009 ▶). For related structures, see: Ali et al. (2011a ▶,b ▶,c ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used for data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C17H11F3O M = 288.26 Monoclinic, a = 15.6546 (13) Å b = 6.2050 (6) Å c = 14.6546 (13) Å β = 113.774 (2)° V = 1302.7 (2) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 100 K 0.40 × 0.18 × 0.10 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.954, T max = 0.988 10643 measured reflections 3804 independent reflections 3033 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.129 S = 1.06 3804 reflections 190 parameters H-atom parameters constrained Δρmax = 0.55 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812003157/lh5408sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812003157/lh5408Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812003157/lh5408Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H11F3OF(000) = 592
Mr = 288.26Dx = 1.470 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3626 reflections
a = 15.6546 (13) Åθ = 2.8–30.1°
b = 6.2050 (6) ŵ = 0.12 mm1
c = 14.6546 (13) ÅT = 100 K
β = 113.774 (2)°Plate, colourless
V = 1302.7 (2) Å30.40 × 0.18 × 0.10 mm
Z = 4
Bruker SMART APEXII CCD diffractometer3804 independent reflections
Radiation source: fine-focus sealed tube3033 reflections with I > 2σ(I)
graphiteRint = 0.023
φ and ω scansθmax = 30.1°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −21→22
Tmin = 0.954, Tmax = 0.988k = −8→8
10643 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.129H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0567P)2 + 0.6847P] where P = (Fo2 + 2Fc2)/3
3804 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.55 e Å3
0 restraintsΔρmin = −0.32 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
F1−0.41885 (6)0.88298 (16)0.17877 (8)0.0335 (2)
F2−0.47050 (6)0.62598 (19)0.23994 (8)0.0392 (3)
F3−0.45949 (7)0.5856 (2)0.09945 (8)0.0450 (3)
O10.11757 (7)0.05902 (17)0.48959 (8)0.0225 (2)
C10.07259 (8)0.5913 (2)0.37708 (10)0.0170 (3)
H1A0.04780.61370.30410.020*
H1B0.05440.71490.40810.020*
C20.17752 (8)0.5624 (2)0.42083 (9)0.0158 (2)
C30.24539 (9)0.7074 (2)0.42066 (10)0.0192 (3)
H3A0.22850.84450.38970.023*
C40.33894 (9)0.6456 (3)0.46729 (10)0.0221 (3)
H4A0.38610.74270.46800.026*
C50.36474 (9)0.4440 (3)0.51297 (10)0.0215 (3)
H5A0.42890.40620.54400.026*
C60.29734 (9)0.2987 (2)0.51332 (9)0.0187 (3)
H6A0.31410.16140.54410.022*
C70.20371 (8)0.3623 (2)0.46647 (9)0.0154 (2)
C80.12026 (8)0.2400 (2)0.45815 (9)0.0166 (3)
C90.03802 (8)0.3802 (2)0.40223 (9)0.0163 (2)
C10−0.04785 (8)0.3083 (2)0.38672 (9)0.0167 (2)
H10A−0.04960.16770.41160.020*
C11−0.13924 (8)0.4128 (2)0.33745 (9)0.0164 (2)
C12−0.21766 (8)0.2952 (2)0.33344 (9)0.0159 (2)
H12A−0.20910.15700.36370.019*
C13−0.30716 (8)0.3780 (2)0.28612 (9)0.0173 (3)
H13A−0.35950.29590.28290.021*
C14−0.31963 (8)0.5819 (2)0.24335 (9)0.0166 (3)
C15−0.24327 (9)0.7038 (2)0.24696 (9)0.0175 (3)
H15A−0.25230.84300.21760.021*
C16−0.15373 (9)0.6189 (2)0.29410 (10)0.0182 (3)
H16A−0.10160.70160.29700.022*
C17−0.41652 (9)0.6688 (3)0.19105 (10)0.0219 (3)
U11U22U33U12U13U23
F10.0274 (4)0.0258 (5)0.0519 (6)0.0129 (4)0.0208 (4)0.0134 (5)
F20.0209 (4)0.0532 (7)0.0507 (6)0.0122 (4)0.0218 (4)0.0260 (5)
F30.0284 (5)0.0563 (8)0.0316 (5)0.0171 (5)−0.0074 (4)−0.0106 (5)
O10.0210 (4)0.0179 (5)0.0275 (5)−0.0019 (4)0.0086 (4)0.0045 (4)
C10.0148 (5)0.0169 (6)0.0181 (5)−0.0023 (5)0.0055 (4)0.0026 (5)
C20.0156 (5)0.0179 (6)0.0143 (5)−0.0030 (5)0.0065 (4)−0.0011 (5)
C30.0192 (6)0.0195 (7)0.0196 (6)−0.0044 (5)0.0086 (5)−0.0004 (5)
C40.0177 (6)0.0274 (8)0.0227 (6)−0.0077 (5)0.0097 (5)−0.0034 (6)
C50.0143 (5)0.0296 (8)0.0197 (6)−0.0025 (5)0.0061 (5)−0.0029 (6)
C60.0161 (5)0.0218 (7)0.0175 (5)−0.0004 (5)0.0059 (4)−0.0018 (5)
C70.0140 (5)0.0178 (6)0.0145 (5)−0.0026 (5)0.0059 (4)−0.0015 (5)
C80.0145 (5)0.0179 (6)0.0162 (5)−0.0016 (5)0.0050 (4)−0.0003 (5)
C90.0162 (5)0.0154 (6)0.0165 (5)−0.0003 (5)0.0059 (4)−0.0002 (5)
C100.0159 (5)0.0157 (6)0.0176 (5)0.0001 (5)0.0059 (4)−0.0002 (5)
C110.0141 (5)0.0178 (6)0.0155 (5)−0.0006 (5)0.0042 (4)0.0008 (5)
C120.0146 (5)0.0157 (6)0.0164 (5)−0.0010 (5)0.0053 (4)0.0008 (5)
C130.0141 (5)0.0194 (6)0.0186 (6)−0.0013 (5)0.0069 (4)0.0002 (5)
C140.0149 (5)0.0191 (6)0.0161 (5)0.0032 (5)0.0065 (4)0.0002 (5)
C150.0185 (6)0.0163 (6)0.0176 (5)0.0019 (5)0.0071 (4)0.0021 (5)
C160.0163 (5)0.0180 (6)0.0190 (6)−0.0020 (5)0.0057 (4)0.0023 (5)
C170.0174 (6)0.0252 (7)0.0236 (6)0.0059 (5)0.0088 (5)0.0054 (6)
F1—C171.3395 (18)C6—H6A0.9500
F2—C171.3365 (16)C7—C81.4727 (17)
F3—C171.3391 (18)C8—C91.4951 (18)
O1—C81.2211 (17)C9—C101.3460 (17)
C1—C21.5141 (17)C10—C111.4683 (17)
C1—C91.5180 (19)C10—H10A0.9500
C1—H1A0.9900C11—C161.4049 (19)
C1—H1B0.9900C11—C121.4090 (17)
C2—C71.3912 (19)C12—C131.3871 (17)
C2—C31.3932 (18)C12—H12A0.9500
C3—C41.3971 (19)C13—C141.3907 (19)
C3—H3A0.9500C13—H13A0.9500
C4—C51.399 (2)C14—C151.3974 (18)
C4—H4A0.9500C14—C171.4972 (17)
C5—C61.3895 (19)C15—C161.3926 (18)
C5—H5A0.9500C15—H15A0.9500
C6—C71.4016 (17)C16—H16A0.9500
C2—C1—C9103.13 (11)C8—C9—C1108.82 (10)
C2—C1—H1A111.1C9—C10—C11130.19 (13)
C9—C1—H1A111.1C9—C10—H10A114.9
C2—C1—H1B111.1C11—C10—H10A114.9
C9—C1—H1B111.1C16—C11—C12118.25 (11)
H1A—C1—H1B109.1C16—C11—C10124.90 (11)
C7—C2—C3120.00 (12)C12—C11—C10116.85 (12)
C7—C2—C1111.62 (11)C13—C12—C11121.11 (12)
C3—C2—C1128.37 (12)C13—C12—H12A119.4
C2—C3—C4118.14 (13)C11—C12—H12A119.4
C2—C3—H3A120.9C12—C13—C14119.48 (12)
C4—C3—H3A120.9C12—C13—H13A120.3
C3—C4—C5121.53 (13)C14—C13—H13A120.3
C3—C4—H4A119.2C13—C14—C15120.86 (12)
C5—C4—H4A119.2C13—C14—C17119.19 (12)
C6—C5—C4120.58 (12)C15—C14—C17119.94 (12)
C6—C5—H5A119.7C16—C15—C14119.25 (13)
C4—C5—H5A119.7C16—C15—H15A120.4
C5—C6—C7117.46 (13)C14—C15—H15A120.4
C5—C6—H6A121.3C15—C16—C11121.03 (12)
C7—C6—H6A121.3C15—C16—H16A119.5
C2—C7—C6122.29 (12)C11—C16—H16A119.5
C2—C7—C8109.90 (11)F2—C17—F3106.87 (13)
C6—C7—C8127.81 (13)F2—C17—F1106.30 (12)
O1—C8—C7127.37 (12)F3—C17—F1105.80 (12)
O1—C8—C9126.09 (12)F2—C17—C14112.52 (11)
C7—C8—C9106.53 (11)F3—C17—C14111.72 (12)
C10—C9—C8118.70 (12)F1—C17—C14113.15 (12)
C10—C9—C1132.43 (12)
C9—C1—C2—C7−0.08 (14)C2—C1—C9—C80.30 (13)
C9—C1—C2—C3−179.37 (13)C8—C9—C10—C11178.11 (12)
C7—C2—C3—C4−0.10 (19)C1—C9—C10—C111.1 (2)
C1—C2—C3—C4179.14 (13)C9—C10—C11—C160.8 (2)
C2—C3—C4—C50.2 (2)C9—C10—C11—C12−179.53 (13)
C3—C4—C5—C6−0.1 (2)C16—C11—C12—C131.41 (19)
C4—C5—C6—C70.02 (19)C10—C11—C12—C13−178.26 (12)
C3—C2—C7—C60.01 (19)C11—C12—C13—C14−1.11 (19)
C1—C2—C7—C6−179.36 (12)C12—C13—C14—C150.38 (19)
C3—C2—C7—C8179.18 (11)C12—C13—C14—C17179.09 (12)
C1—C2—C7—C8−0.18 (15)C13—C14—C15—C160.01 (19)
C5—C6—C7—C20.03 (19)C17—C14—C15—C16−178.69 (12)
C5—C6—C7—C8−178.99 (12)C14—C15—C16—C110.3 (2)
C2—C7—C8—O1179.80 (13)C12—C11—C16—C15−1.01 (19)
C6—C7—C8—O1−1.1 (2)C10—C11—C16—C15178.63 (12)
C2—C7—C8—C90.36 (14)C13—C14—C17—F241.38 (18)
C6—C7—C8—C9179.48 (12)C15—C14—C17—F2−139.90 (14)
O1—C8—C9—C102.5 (2)C13—C14—C17—F3−78.84 (16)
C7—C8—C9—C10−178.09 (11)C15—C14—C17—F399.88 (16)
O1—C8—C9—C1−179.86 (13)C13—C14—C17—F1161.88 (12)
C7—C8—C9—C1−0.41 (14)C15—C14—C17—F1−19.40 (18)
C2—C1—C9—C10177.55 (14)
Cg1 and Cg2 are the centroids of the C2–C7 and C11–C16 rings, respectively.
D—H···AD—HH···AD···AD—H···A
C1—H1B···O1i0.992.453.2713 (17)140.
C10—H10A···O1ii0.952.543.3566 (17)144.
C12—H12A···O1ii0.952.453.2765 (17)146.
C15—H15A···Cg1iii0.952.783.5163 (14)135.
C3—H3A···Cg2iii0.952.813.5035 (15)130.
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C2–C7 and C11–C16 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1B⋯O1i0.992.453.2713 (17)140
C10—H10A⋯O1ii0.952.543.3566 (17)144
C12—H12A⋯O1ii0.952.453.2765 (17)146
C15—H15ACg1iii0.952.783.5163 (14)135
C3—H3ACg2iii0.952.813.5035 (15)130

Symmetry codes: (i) ; (ii) ; (iii) .

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