Literature DB >> 22091162

(E)-2-[4-(Trifluoro-meth-oxy)benzyl-idene]indan-1-one.

Mohamed Ashraf Ali, Rusli Ismail, Soo Choon Tan, Mohd Mustaqim Rosli, Hoong-Kun Fun.   

Abstract

In the title compound, C(17)H(11)F(3)O(2), the dihydro-indene ring is approximately planar with a maximum deviation of 0.024 (2) Å and makes a dihedral angle of 3.17 (8) Å with the adjacent benzene ring. In the crystal, mol-ecules are inter-connected by C-H⋯O inter-actions, forming an infinite chain along the c axis.

Entities:  

Year:  2011        PMID: 22091162      PMCID: PMC3213585          DOI: 10.1107/S1600536811028698

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological background to dihydro­indeno and heterocyclic derivatives, see: Dinges et al. (2006 ▶); Garton et al. (2006 ▶); Lin et al. (1997 ▶); Hsieh et al. (1998 ▶); Ko et al. (2003 ▶). For a related structure, see: Ali et al. (2011 ▶). For standard bond lengths, see: Allen et al. (1987 ▶) For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C17H11F3O2 M = 304.26 Monoclinic, a = 15.2216 (4) Å b = 14.6734 (4) Å c = 6.1463 (1) Å β = 95.872 (1)° V = 1365.59 (6) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 100 K 0.38 × 0.20 × 0.18 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.955, T max = 0.978 27814 measured reflections 4043 independent reflections 3389 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.181 S = 1.11 4043 reflections 199 parameters H-atom parameters constrained Δρmax = 0.87 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811028698/sj5181sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811028698/sj5181Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H11F3O2F(000) = 624
Mr = 304.26Dx = 1.480 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9932 reflections
a = 15.2216 (4) Åθ = 2.7–30.0°
b = 14.6734 (4) ŵ = 0.12 mm1
c = 6.1463 (1) ÅT = 100 K
β = 95.872 (1)°Block, light-yellow
V = 1365.59 (6) Å30.38 × 0.20 × 0.18 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer4043 independent reflections
Radiation source: fine-focus sealed tube3389 reflections with I > 2σ(I)
graphiteRint = 0.036
φ and ω scansθmax = 30.2°, θmin = 1.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −21→21
Tmin = 0.955, Tmax = 0.978k = −19→20
27814 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.181H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0634P)2 + 1.8592P] where P = (Fo2 + 2Fc2)/3
4043 reflections(Δ/σ)max < 0.001
199 parametersΔρmax = 0.87 e Å3
0 restraintsΔρmin = −0.28 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.40870 (11)0.43026 (14)0.4881 (3)0.0493 (5)
F20.47465 (10)0.43584 (13)0.1983 (3)0.0481 (4)
F30.51278 (10)0.33503 (13)0.4426 (3)0.0467 (4)
O1−0.10593 (11)0.45341 (11)−0.4450 (2)0.0277 (3)
O20.38837 (11)0.31658 (12)0.2471 (3)0.0315 (4)
C1−0.06329 (13)0.35420 (13)0.0949 (3)0.0211 (4)
H1A−0.04350.29060.12200.025*
H1B−0.04240.39190.22340.025*
C2−0.16251 (14)0.35906 (13)0.0484 (3)0.0205 (4)
C3−0.22701 (14)0.33207 (14)0.1806 (3)0.0245 (4)
H3A−0.21110.30770.32240.029*
C4−0.31497 (15)0.34167 (16)0.1000 (4)0.0294 (5)
H4A−0.35950.32330.18830.035*
C5−0.33995 (15)0.37768 (16)−0.1085 (4)0.0287 (4)
H5A−0.40070.3834−0.15960.034*
C6−0.27604 (14)0.40491 (14)−0.2400 (3)0.0244 (4)
H6A−0.29210.4295−0.38150.029*
C7−0.18764 (13)0.39517 (13)−0.1592 (3)0.0199 (4)
C8−0.10851 (14)0.41903 (13)−0.2650 (3)0.0217 (4)
C9−0.02974 (15)0.39174 (14)−0.1129 (3)0.0236 (4)
C100.05182 (15)0.40510 (14)−0.1712 (3)0.0238 (4)
H10A0.05410.4300−0.31320.029*
C110.13779 (14)0.38722 (14)−0.0497 (3)0.0231 (4)
C120.21341 (14)0.40795 (14)−0.1522 (3)0.0229 (4)
H12A0.20710.4368−0.29130.027*
C130.29726 (14)0.38732 (14)−0.0553 (3)0.0245 (4)
H13A0.34810.3999−0.12800.029*
C140.30495 (14)0.34785 (14)0.1510 (3)0.0231 (4)
C150.23247 (14)0.32961 (14)0.2623 (3)0.0232 (4)
H15A0.23980.30410.40510.028*
C160.14908 (14)0.34919 (14)0.1619 (3)0.0247 (4)
H16A0.09870.33680.23660.030*
C170.44420 (15)0.37880 (19)0.3410 (4)0.0334 (5)
U11U22U33U12U13U23
F10.0378 (9)0.0719 (12)0.0369 (8)0.0042 (8)−0.0022 (6)−0.0208 (8)
F20.0344 (8)0.0604 (11)0.0489 (9)−0.0086 (7)0.0013 (7)0.0168 (8)
F30.0275 (7)0.0728 (12)0.0387 (8)0.0091 (7)−0.0019 (6)0.0124 (8)
O10.0325 (8)0.0316 (8)0.0196 (7)−0.0001 (6)0.0050 (6)0.0053 (6)
O20.0285 (8)0.0346 (9)0.0309 (8)0.0073 (7)0.0000 (6)0.0027 (6)
C10.0264 (10)0.0186 (9)0.0186 (8)−0.0006 (7)0.0030 (7)0.0032 (6)
C20.0271 (10)0.0157 (8)0.0188 (8)0.0003 (7)0.0039 (7)−0.0003 (6)
C30.0305 (11)0.0230 (9)0.0211 (9)0.0009 (8)0.0076 (7)0.0024 (7)
C40.0296 (11)0.0299 (11)0.0302 (11)0.0011 (9)0.0110 (8)0.0025 (8)
C50.0262 (10)0.0294 (11)0.0306 (11)0.0015 (8)0.0035 (8)0.0004 (8)
C60.0276 (10)0.0238 (9)0.0218 (9)0.0018 (8)0.0019 (7)0.0002 (7)
C70.0261 (10)0.0160 (8)0.0178 (8)−0.0006 (7)0.0042 (7)−0.0007 (6)
C80.0271 (10)0.0192 (9)0.0192 (8)0.0002 (7)0.0037 (7)0.0014 (6)
C90.0331 (11)0.0198 (9)0.0183 (8)0.0003 (8)0.0040 (7)0.0004 (7)
C100.0327 (11)0.0208 (9)0.0184 (8)−0.0006 (8)0.0043 (7)−0.0009 (7)
C110.0285 (10)0.0216 (9)0.0194 (9)−0.0007 (8)0.0029 (7)0.0024 (7)
C120.0300 (10)0.0213 (9)0.0173 (8)−0.0030 (8)0.0023 (7)0.0006 (7)
C130.0281 (10)0.0252 (10)0.0208 (9)0.0004 (8)0.0050 (7)−0.0010 (7)
C140.0271 (10)0.0201 (9)0.0214 (9)0.0029 (7)−0.0013 (7)−0.0009 (7)
C150.0310 (10)0.0207 (9)0.0175 (8)0.0004 (8)0.0011 (7)0.0014 (7)
C160.0272 (10)0.0257 (10)0.0214 (9)−0.0010 (8)0.0036 (7)0.0057 (7)
C170.0248 (11)0.0483 (14)0.0268 (10)0.0028 (10)0.0014 (8)0.0033 (9)
F1—C171.334 (3)C6—C71.393 (3)
F2—C171.330 (3)C6—H6A0.9500
F3—C171.326 (3)C7—C81.469 (3)
O1—C81.220 (2)C8—C91.497 (3)
O2—C171.337 (3)C9—C101.341 (3)
O2—C141.421 (2)C10—C111.463 (3)
C1—C21.510 (3)C10—H10A0.9500
C1—C91.526 (3)C11—C121.401 (3)
C1—H1A0.9900C11—C161.409 (3)
C1—H1B0.9900C12—C131.386 (3)
C2—C31.395 (3)C12—H12A0.9500
C2—C71.398 (3)C13—C141.388 (3)
C3—C41.387 (3)C13—H13A0.9500
C3—H3A0.9500C14—C151.382 (3)
C4—C51.402 (3)C15—C161.384 (3)
C4—H4A0.9500C15—H15A0.9500
C5—C61.386 (3)C16—H16A0.9500
C5—H5A0.9500
C17—O2—C14117.40 (18)C10—C9—C1132.40 (19)
C2—C1—C9103.78 (16)C8—C9—C1107.68 (17)
C2—C1—H1A111.0C9—C10—C11129.92 (19)
C9—C1—H1A111.0C9—C10—H10A115.0
C2—C1—H1B111.0C11—C10—H10A115.0
C9—C1—H1B111.0C12—C11—C16118.21 (19)
H1A—C1—H1B109.0C12—C11—C10117.70 (17)
C3—C2—C7119.75 (19)C16—C11—C10124.08 (19)
C3—C2—C1128.79 (18)C13—C12—C11121.48 (18)
C7—C2—C1111.46 (17)C13—C12—H12A119.3
C4—C3—C2118.33 (19)C11—C12—H12A119.3
C4—C3—H3A120.8C12—C13—C14118.15 (19)
C2—C3—H3A120.8C12—C13—H13A120.9
C3—C4—C5121.8 (2)C14—C13—H13A120.9
C3—C4—H4A119.1C15—C14—C13122.39 (19)
C5—C4—H4A119.1C15—C14—O2117.17 (18)
C6—C5—C4120.1 (2)C13—C14—O2120.18 (19)
C6—C5—H5A120.0C14—C15—C16118.77 (18)
C4—C5—H5A120.0C14—C15—H15A120.6
C5—C6—C7118.19 (19)C16—C15—H15A120.6
C5—C6—H6A120.9C15—C16—C11120.89 (19)
C7—C6—H6A120.9C15—C16—H16A119.6
C6—C7—C2121.90 (18)C11—C16—H16A119.6
C6—C7—C8128.58 (18)F3—C17—F2107.74 (19)
C2—C7—C8109.52 (17)F3—C17—F1108.00 (19)
O1—C8—C7127.16 (19)F2—C17—F1106.5 (2)
O1—C8—C9125.34 (19)F3—C17—O2107.9 (2)
C7—C8—C9107.49 (16)F2—C17—O2113.2 (2)
C10—C9—C8119.89 (18)F1—C17—O2113.3 (2)
C9—C1—C2—C3178.8 (2)C2—C1—C9—C10179.7 (2)
C9—C1—C2—C7−0.3 (2)C2—C1—C9—C81.8 (2)
C7—C2—C3—C40.4 (3)C8—C9—C10—C11177.73 (19)
C1—C2—C3—C4−178.7 (2)C1—C9—C10—C110.1 (4)
C2—C3—C4—C5−0.2 (3)C9—C10—C11—C12179.9 (2)
C3—C4—C5—C6−0.1 (4)C9—C10—C11—C161.0 (4)
C4—C5—C6—C70.1 (3)C16—C11—C12—C133.6 (3)
C5—C6—C7—C20.0 (3)C10—C11—C12—C13−175.43 (19)
C5—C6—C7—C8−179.7 (2)C11—C12—C13—C14−2.0 (3)
C3—C2—C7—C6−0.3 (3)C12—C13—C14—C15−0.7 (3)
C1—C2—C7—C6178.95 (18)C12—C13—C14—O2173.25 (18)
C3—C2—C7—C8179.50 (18)C17—O2—C14—C15−105.6 (2)
C1—C2—C7—C8−1.3 (2)C17—O2—C14—C1380.1 (3)
C6—C7—C8—O11.1 (3)C13—C14—C15—C161.8 (3)
C2—C7—C8—O1−178.7 (2)O2—C14—C15—C16−172.35 (18)
C6—C7—C8—C9−177.8 (2)C14—C15—C16—C11−0.2 (3)
C2—C7—C8—C92.4 (2)C12—C11—C16—C15−2.4 (3)
O1—C8—C9—C100.3 (3)C10—C11—C16—C15176.49 (19)
C7—C8—C9—C10179.24 (18)C14—O2—C17—F3172.57 (17)
O1—C8—C9—C1178.51 (19)C14—O2—C17—F2−68.3 (3)
C7—C8—C9—C1−2.6 (2)C14—O2—C17—F153.1 (3)
D—H···AD—HH···AD···AD—H···A
C1—H1B···O1i0.992.513.304 (2)137
C10—H10A···O1ii0.952.453.309 (2)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1B⋯O1i0.992.513.304 (2)137
C10—H10A⋯O1ii0.952.453.309 (2)151

Symmetry codes: (i) ; (ii) .

  8 in total

1.  Structure-activity relationship studies on chalcone derivatives. the potent inhibition of chemical mediators release.

Authors:  Horng-Huey Ko; Lo-Ti Tsao; Kun-Lung Yu; Cheng-Tsung Liu; Jih-Pyang Wang; Chun-Nan Lin
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2.  Hit-to-lead optimization of 1,4-dihydroindeno[1,2-c]pyrazoles as a novel class of KDR kinase inhibitors.

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3.  A short history of SHELX.

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4.  2',5'-Dihydroxychalcone as a potent chemical mediator and cyclooxygenase inhibitor.

Authors:  C N Lin; T H Lee; M F Hsu; J P Wang; F N Ko; C M Teng
Journal:  J Pharm Pharmacol       Date:  1997-05       Impact factor: 3.765

5.  Synthesis and anti-inflammatory effect of chalcones and related compounds.

Authors:  H K Hsieh; T H Lee; J P Wang; J J Wang; C N Lin
Journal:  Pharm Res       Date:  1998-01       Impact factor: 4.200

6.  OSI-930: a novel selective inhibitor of Kit and kinase insert domain receptor tyrosine kinases with antitumor activity in mouse xenograft models.

Authors:  Andrew J Garton; Andrew P A Crew; Maryland Franklin; Andrew R Cooke; Graham M Wynne; Linda Castaldo; Jennifer Kahler; Shannon L Winski; April Franks; Eric N Brown; Mark A Bittner; John F Keily; Paul Briner; Chris Hidden; Mary C Srebernak; Carrie Pirrit; Matthew O'Connor; Anna Chan; Bojana Vulevic; Dwight Henninger; Karen Hart; Regina Sennello; An-Hu Li; Tao Zhang; Frank Richardson; David L Emerson; Arlindo L Castelhano; Lee D Arnold; Neil W Gibson
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7.  (E)-2-(4-Chloro-benzyl-idene)indan-1-one.

Authors:  Mohamed Ashraf Ali; Tan Soo Choon; Lim Yee Lan; Mohd Mustaqim Rosli; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-16

8.  Structure validation in chemical crystallography.

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  8 in total
  1 in total

1.  (E)-2-[4-(Trifluoro-meth-yl)benzyl-idene]-2,3-dihydro-1H-inden-1-one.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-31
  1 in total

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