Literature DB >> 22347138

N-(5-Eth-oxy-1,3,4-thia-diazol-2-yl)benzamide.

Sung Kwon Kang1, Nam Sook Cho, Min Kyeong Jeon.   

Abstract

In the title compound, C(11)H(11)N(3)O(2)S, the dihedral angle between the thia-diazole and phenyl rings is 28.08 (7)°. In the crystal, mol-ecules are linked into an inversion dimer by a pair of inter-molecular N-H⋯N hydrogen bonds with an R(2) (2)(8) graph-set motif.

Entities:  

Year:  2012        PMID: 22347138      PMCID: PMC3275282          DOI: 10.1107/S1600536812002978

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures and reactivity of thia­diazole derivatives, see: Cho et al. (1996 ▶); Parkanyi et al. (1989 ▶).

Experimental

Crystal data

C11H11N3O2S M = 249.29 Monoclinic, a = 3.9797 (5) Å b = 20.138 (3) Å c = 14.4305 (18) Å β = 92.036 (2)° V = 1155.8 (2) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 296 K 0.27 × 0.12 × 0.11 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.956, T max = 0.965 22225 measured reflections 2891 independent reflections 1287 reflections with I > 2σ(I) R int = 0.114

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.081 S = 0.74 2891 reflections 158 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.19 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812002978/is5058sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812002978/is5058Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812002978/is5058Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H11N3O2SF(000) = 520
Mr = 249.29Dx = 1.433 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1448 reflections
a = 3.9797 (5) Åθ = 2.8–18.7°
b = 20.138 (3) ŵ = 0.27 mm1
c = 14.4305 (18) ÅT = 296 K
β = 92.036 (2)°Needle, colourless
V = 1155.8 (2) Å30.27 × 0.12 × 0.11 mm
Z = 4
Bruker SMART CCD area-detector diffractometer1287 reflections with I > 2σ(I)
graphiteRint = 0.114
φ and ω scansθmax = 28.4°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −5→5
Tmin = 0.956, Tmax = 0.965k = −26→26
22225 measured reflectionsl = −19→19
2891 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H atoms treated by a mixture of independent and constrained refinement
S = 0.74w = 1/[σ2(Fo2) + (0.0257P)2] where P = (Fo2 + 2Fc2)/3
2891 reflections(Δ/σ)max < 0.001
158 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.39663 (15)0.34946 (3)0.62317 (4)0.04682 (18)
C20.2359 (5)0.42298 (9)0.57867 (14)0.0375 (5)
N30.2325 (5)0.42812 (8)0.48901 (12)0.0467 (5)
N40.3654 (5)0.37174 (8)0.44715 (11)0.0473 (5)
C50.4558 (5)0.32859 (10)0.50836 (14)0.0411 (5)
N60.1165 (5)0.47337 (9)0.63320 (12)0.0433 (5)
H60.021 (6)0.5057 (12)0.6040 (16)0.082 (9)*
C70.1183 (5)0.46904 (10)0.72786 (14)0.0398 (5)
O80.2192 (4)0.41880 (7)0.76704 (9)0.0545 (4)
C9−0.0024 (5)0.52767 (10)0.77924 (14)0.0399 (5)
C10−0.1415 (6)0.51700 (12)0.86450 (15)0.0549 (7)
H10−0.16290.47390.88680.066*
C11−0.2486 (6)0.56979 (13)0.91657 (16)0.0608 (7)
H11−0.34390.56230.97360.073*
C12−0.2143 (6)0.63343 (13)0.88413 (16)0.0621 (7)
H12−0.2880.66910.9190.075*
C13−0.0712 (6)0.64450 (11)0.80031 (16)0.0606 (7)
H13−0.04440.68770.77910.073*
C140.0330 (6)0.59171 (10)0.74726 (15)0.0491 (6)
H140.12680.59940.69010.059*
O150.5894 (4)0.26919 (7)0.49063 (10)0.0541 (4)
C160.6596 (6)0.25697 (10)0.39481 (14)0.0516 (6)
H16A0.83590.28650.37510.062*
H16B0.45970.26490.35590.062*
C170.7689 (6)0.18619 (11)0.38643 (15)0.0639 (7)
H17A0.81810.17690.32310.096*
H17B0.59220.15740.40570.096*
H17C0.96660.17890.42510.096*
U11U22U33U12U13U23
S10.0621 (4)0.0364 (3)0.0421 (3)0.0089 (3)0.0035 (3)0.0037 (3)
C20.0460 (14)0.0303 (12)0.0362 (12)0.0008 (10)0.0005 (10)−0.0005 (10)
N30.0673 (14)0.0351 (11)0.0377 (11)0.0110 (9)0.0004 (9)−0.0021 (9)
N40.0638 (14)0.0364 (11)0.0417 (11)0.0106 (9)0.0004 (9)−0.0033 (9)
C50.0478 (15)0.0334 (12)0.0420 (13)0.0021 (11)0.0024 (11)−0.0026 (11)
N60.0624 (14)0.0343 (11)0.0330 (11)0.0088 (10)−0.0004 (9)0.0006 (9)
C70.0406 (14)0.0376 (13)0.0411 (13)−0.0021 (10)0.0011 (10)0.0030 (11)
O80.0763 (12)0.0425 (9)0.0445 (9)0.0106 (8)0.0006 (8)0.0078 (7)
C90.0428 (14)0.0421 (13)0.0348 (12)0.0002 (11)−0.0010 (10)−0.0013 (11)
C100.0631 (18)0.0525 (16)0.0492 (15)−0.0006 (13)0.0017 (12)−0.0016 (12)
C110.0647 (18)0.0749 (19)0.0436 (15)−0.0008 (15)0.0128 (12)−0.0064 (14)
C120.0724 (19)0.0667 (19)0.0470 (16)0.0162 (15)−0.0007 (13)−0.0157 (14)
C130.090 (2)0.0438 (15)0.0480 (15)0.0117 (14)−0.0032 (14)−0.0036 (13)
C140.0667 (17)0.0426 (14)0.0381 (13)0.0023 (12)0.0013 (11)−0.0005 (11)
O150.0777 (12)0.0369 (9)0.0483 (10)0.0159 (8)0.0091 (8)−0.0015 (7)
C160.0564 (17)0.0477 (15)0.0510 (15)0.0077 (12)0.0056 (12)−0.0087 (12)
C170.0682 (18)0.0512 (16)0.0720 (18)0.0097 (13)−0.0032 (14)−0.0174 (13)
S1—C21.727 (2)C11—C121.373 (3)
S1—C51.733 (2)C11—H110.93
C2—N31.298 (2)C12—C131.373 (3)
C2—N61.379 (2)C12—H120.93
N3—N41.399 (2)C13—C141.382 (3)
N4—C51.282 (2)C13—H130.93
C5—O151.337 (2)C14—H140.93
N6—C71.368 (2)O15—C161.442 (2)
N6—H60.86 (2)C16—C171.496 (3)
C7—O81.220 (2)C16—H16A0.97
C7—C91.483 (3)C16—H16B0.97
C9—C141.379 (3)C17—H17A0.96
C9—C101.384 (3)C17—H17B0.96
C10—C111.378 (3)C17—H17C0.96
C10—H100.93
C2—S1—C585.05 (10)C10—C11—H11120.1
N3—C2—N6121.25 (18)C11—C12—C13120.1 (2)
N3—C2—S1115.45 (15)C11—C12—H12120
N6—C2—S1123.31 (16)C13—C12—H12120
C2—N3—N4112.03 (16)C12—C13—C14120.3 (2)
C5—N4—N3110.73 (17)C12—C13—H13119.8
N4—C5—O15125.34 (19)C14—C13—H13119.8
N4—C5—S1116.75 (16)C9—C14—C13119.9 (2)
O15—C5—S1117.92 (15)C9—C14—H14120.1
C7—N6—C2122.22 (19)C13—C14—H14120.1
C7—N6—H6121.7 (16)C5—O15—C16115.34 (15)
C2—N6—H6115.7 (16)O15—C16—C17107.87 (17)
O8—C7—N6120.35 (19)O15—C16—H16A110.1
O8—C7—C9122.38 (19)C17—C16—H16A110.1
N6—C7—C9117.26 (19)O15—C16—H16B110.1
C14—C9—C10119.5 (2)C17—C16—H16B110.1
C14—C9—C7122.6 (2)H16A—C16—H16B108.4
C10—C9—C7117.9 (2)C16—C17—H17A109.5
C11—C10—C9120.4 (2)C16—C17—H17B109.5
C11—C10—H10119.8H17A—C17—H17B109.5
C9—C10—H10119.8C16—C17—H17C109.5
C12—C11—C10119.8 (2)H17A—C17—H17C109.5
C12—C11—H11120.1H17B—C17—H17C109.5
D—H···AD—HH···AD···AD—H···A
N6—H6···N3i0.86 (2)2.12 (2)2.967 (3)169 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N6—H6⋯N3i0.86 (2)2.12 (2)2.967 (3)169 (2)

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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1.  5-({3-[(5-Amino-1,3,4-thia-diazol-2-yl)sulfanylmeth-yl]benz-yl}sulfan-yl)-1,3,4-thia-diazol-2-amine.

Authors:  Sung Kwon Kang; Nam Sook Cho; Siyoung Jang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-31
  1 in total

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