Literature DB >> 22347004

4-(3,5-Dioxo-10-oxa-4-aza-tricyclo-[5.2.1.0]decan-4-yl)-10-oxa-4-aza-tricyclo-[5.2.1.0]decane-3,5-dione.

Peng-Peng Wang, Qiu-Yue Lin, Fan Zhang.   

Abstract

In the title compound, C(16)H(16)N(2)O(6), the dihedral angle between the two pyrrolidine rings is 79.38 (14)°.

Entities:  

Year:  2012        PMID: 22347004      PMCID: PMC3275059          DOI: 10.1107/S1600536812000542

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Norcantharidin [systematic name: 7-oxabicyclo­(2.2.1)heptane-2,3-dicarb­oxy­lic anhydride] and its derivatives are of significant inter­est as serine/threonine protein phosphatase 1 and 2A inhibitors, see: Hill et al. (2008 ▶). For related structures, see: Li et al. (2011 ▶); Zhu & Lin (2009 ▶).

Experimental

Crystal data

C16H16N2O6 M = 332.31 Orthorhombic, a = 10.2342 (6) Å b = 10.5673 (6) Å c = 27.3485 (17) Å V = 2957.7 (3) Å3 Z = 8 Mo Kα radiation μ = 0.12 mm−1 T = 296 K 0.14 × 0.09 × 0.08 mm

Data collection

Bruker P4 diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.987, T max = 0.991 43071 measured reflections 3423 independent reflections 1581 reflections with I > 2σ(I) R int = 0.163

Refinement

R[F 2 > 2σ(F 2)] = 0.083 wR(F 2) = 0.224 S = 1.07 3423 reflections 217 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.21 e Å−3 Data collection: SMART (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812000542/ff2050sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812000542/ff2050Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812000542/ff2050Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16N2O6F(000) = 1392
Mr = 332.31Dx = 1.493 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2007 reflections
a = 10.2342 (6) Åθ = 1.5–27.6°
b = 10.5673 (6) ŵ = 0.12 mm1
c = 27.3485 (17) ÅT = 296 K
V = 2957.7 (3) Å3Block, colourless
Z = 80.14 × 0.09 × 0.08 mm
Bruker P4 diffractometer3423 independent reflections
Radiation source: fine-focus sealed tube1581 reflections with I > 2σ(I)
graphiteRint = 0.163
ω scansθmax = 27.6°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.987, Tmax = 0.991k = −13→13
43071 measured reflectionsl = −35→35
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.083Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.224H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0862P)2 + 1.8201P] where P = (Fo2 + 2Fc2)/3
3423 reflections(Δ/σ)max = 0.002
217 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O40.4418 (3)−0.1479 (3)0.03560 (11)0.0595 (8)
O10.5405 (3)0.4020 (3)0.13629 (11)0.0643 (9)
N10.5287 (3)0.0942 (3)0.15182 (13)0.0517 (9)
O20.3401 (3)0.1174 (3)0.10792 (12)0.0658 (9)
O30.7107 (3)0.1261 (3)0.19883 (14)0.0784 (11)
O50.6972 (3)0.0800 (3)0.07064 (12)0.0701 (10)
C160.5130 (4)−0.1318 (4)0.14002 (15)0.0484 (10)
C110.6499 (4)−0.1471 (3)0.06726 (14)0.0486 (10)
H11A0.7384−0.18210.06540.058*
N20.5691 (3)−0.0145 (3)0.12856 (13)0.0496 (9)
C120.5594 (4)−0.2230 (3)0.10115 (14)0.0446 (10)
H12A0.6021−0.29790.11490.054*
O60.4401 (3)−0.1492 (3)0.17385 (11)0.0654 (9)
C70.4108 (4)0.1543 (4)0.13968 (16)0.0498 (10)
C10.5826 (4)0.3963 (4)0.18576 (17)0.0557 (12)
H1A0.67760.40210.18960.067*
C80.6043 (4)0.1584 (4)0.18598 (16)0.0502 (11)
C100.4465 (4)−0.2567 (4)0.06668 (16)0.0542 (11)
H10A0.3640−0.27420.08360.065*
C150.6466 (4)−0.0144 (4)0.08651 (16)0.0510 (11)
C30.5256 (4)0.2710 (4)0.20309 (16)0.0491 (10)
H3A0.51050.26980.23850.059*
C20.4016 (5)0.3919 (4)0.14670 (18)0.0622 (13)
H2A0.34590.39560.11760.075*
C140.4899 (5)−0.3623 (4)0.03254 (17)0.0622 (12)
H14A0.4165−0.39860.01500.075*
H14B0.5357−0.42860.05010.075*
C90.5756 (4)−0.1560 (4)0.01894 (16)0.0545 (11)
H9A0.5995−0.0901−0.00460.065*
C130.5819 (5)−0.2898 (4)−0.00196 (16)0.0623 (13)
H13A0.6700−0.3235−0.00070.075*
H13B0.5507−0.2923−0.03540.075*
C40.3968 (4)0.2652 (4)0.17362 (16)0.0500 (11)
H4A0.31990.25790.19480.060*
C60.3774 (5)0.4990 (4)0.18326 (18)0.0640 (13)
H6A0.30510.47950.20490.077*
H6B0.36020.57850.16670.077*
C50.5080 (5)0.5027 (4)0.21108 (18)0.0626 (13)
H5A0.55170.58350.20710.075*
H5B0.49610.48560.24560.075*
U11U22U33U12U13U23
O40.057 (2)0.0543 (18)0.0669 (19)0.0109 (15)−0.0062 (16)−0.0045 (15)
O10.080 (3)0.0474 (17)0.065 (2)−0.0046 (15)0.0149 (18)0.0010 (15)
N10.056 (2)0.0350 (18)0.064 (2)0.0030 (16)−0.0021 (18)−0.0112 (16)
O20.058 (2)0.0620 (19)0.077 (2)0.0033 (16)−0.0110 (18)−0.0143 (17)
O30.066 (2)0.061 (2)0.108 (3)0.0160 (17)−0.025 (2)−0.0178 (19)
O50.074 (2)0.0484 (17)0.088 (2)−0.0161 (16)0.0124 (18)0.0048 (17)
C160.057 (3)0.041 (2)0.046 (2)0.004 (2)0.002 (2)0.001 (2)
C110.057 (3)0.036 (2)0.053 (2)0.0058 (19)0.004 (2)0.0009 (18)
N20.056 (2)0.0322 (17)0.060 (2)0.0004 (16)0.0071 (19)−0.0058 (16)
C120.050 (3)0.0285 (19)0.055 (2)0.0028 (18)0.000 (2)0.0018 (17)
O60.085 (2)0.0537 (18)0.0576 (18)−0.0048 (17)0.0187 (18)−0.0052 (15)
C70.047 (3)0.042 (2)0.061 (3)−0.003 (2)0.001 (2)0.001 (2)
C10.051 (3)0.039 (2)0.078 (3)−0.0008 (19)−0.002 (2)−0.003 (2)
C80.046 (3)0.039 (2)0.065 (3)0.001 (2)−0.005 (2)0.000 (2)
C100.056 (3)0.045 (2)0.062 (3)−0.005 (2)0.005 (2)−0.003 (2)
C150.047 (3)0.043 (2)0.063 (3)−0.001 (2)−0.002 (2)0.003 (2)
C30.057 (3)0.037 (2)0.054 (2)−0.0003 (19)−0.001 (2)−0.0046 (19)
C20.070 (3)0.046 (2)0.070 (3)0.006 (2)−0.010 (3)0.002 (2)
C140.079 (3)0.042 (2)0.065 (3)0.000 (2)−0.003 (3)−0.012 (2)
C90.062 (3)0.048 (2)0.053 (2)0.007 (2)0.002 (2)0.005 (2)
C130.075 (3)0.060 (3)0.052 (3)0.013 (2)0.000 (2)−0.009 (2)
C40.042 (2)0.043 (2)0.065 (3)0.0022 (19)0.001 (2)−0.002 (2)
C60.064 (3)0.041 (2)0.087 (3)0.010 (2)−0.005 (3)−0.004 (2)
C50.075 (3)0.038 (2)0.075 (3)0.001 (2)0.001 (3)−0.011 (2)
O4—C101.431 (5)C1—H1A0.9800
O4—C91.446 (5)C8—C31.511 (6)
O1—C11.421 (5)C10—C141.520 (6)
O1—C21.454 (6)C10—H10A0.9800
N1—N21.376 (4)C3—C41.547 (6)
N1—C81.390 (5)C3—H3A0.9800
N1—C71.404 (5)C2—C41.529 (6)
O2—C71.196 (5)C2—C61.530 (6)
O3—C81.194 (5)C2—H2A0.9800
O5—C151.205 (5)C14—C131.537 (6)
C16—O61.203 (5)C14—H14A0.9700
C16—N21.402 (5)C14—H14B0.9700
C16—C121.511 (5)C9—C131.526 (6)
C11—C151.498 (6)C9—H9A0.9800
C11—C91.527 (6)C13—H13A0.9700
C11—C121.536 (5)C13—H13B0.9700
C11—H11A0.9800C4—H4A0.9800
N2—C151.397 (5)C6—C51.539 (7)
C12—C101.533 (6)C6—H6A0.9700
C12—H12A0.9800C6—H6B0.9700
C7—C41.502 (6)C5—H5A0.9700
C1—C31.523 (6)C5—H5B0.9700
C1—C51.525 (6)
C10—O4—C996.2 (3)C1—C3—C4101.5 (3)
C1—O1—C296.2 (3)C8—C3—H3A112.3
N2—N1—C8123.4 (3)C1—C3—H3A112.3
N2—N1—C7121.8 (3)C4—C3—H3A112.3
C8—N1—C7114.6 (3)O1—C2—C4101.0 (3)
O6—C16—N2124.1 (4)O1—C2—C6103.4 (4)
O6—C16—C12129.7 (4)C4—C2—C6109.1 (4)
N2—C16—C12106.1 (3)O1—C2—H2A114.0
C15—C11—C9110.5 (3)C4—C2—H2A114.0
C15—C11—C12105.3 (3)C6—C2—H2A114.0
C9—C11—C12101.0 (3)C10—C14—C13101.0 (3)
C15—C11—H11A113.1C10—C14—H14A111.6
C9—C11—H11A113.1C13—C14—H14A111.6
C12—C11—H11A113.1C10—C14—H14B111.6
N1—N2—C15123.4 (3)C13—C14—H14B111.6
N1—N2—C16120.8 (3)H14A—C14—H14B109.4
C15—N2—C16114.6 (3)O4—C9—C13102.3 (3)
C16—C12—C10110.1 (3)O4—C9—C11101.2 (3)
C16—C12—C11106.3 (3)C13—C9—C11111.1 (3)
C10—C12—C11101.8 (3)O4—C9—H9A113.7
C16—C12—H12A112.6C13—C9—H9A113.7
C10—C12—H12A112.6C11—C9—H9A113.7
C11—C12—H12A112.6C9—C13—C14101.9 (3)
O2—C7—N1123.0 (4)C9—C13—H13A111.4
O2—C7—C4130.2 (4)C14—C13—H13A111.4
N1—C7—C4106.8 (4)C9—C13—H13B111.4
O1—C1—C3102.5 (3)C14—C13—H13B111.4
O1—C1—C5104.4 (4)H13A—C13—H13B109.3
C3—C1—C5107.9 (4)C7—C4—C2112.5 (4)
O1—C1—H1A113.7C7—C4—C3105.7 (3)
C3—C1—H1A113.7C2—C4—C3100.9 (3)
C5—C1—H1A113.7C7—C4—H4A112.3
O3—C8—N1124.5 (4)C2—C4—H4A112.3
O3—C8—C3128.3 (4)C3—C4—H4A112.3
N1—C8—C3107.2 (4)C2—C6—C5101.6 (4)
O4—C10—C14103.6 (3)C2—C6—H6A111.4
O4—C10—C12101.7 (3)C5—C6—H6A111.4
C14—C10—C12109.1 (4)C2—C6—H6B111.4
O4—C10—H10A113.8C5—C6—H6B111.4
C14—C10—H10A113.8H6A—C6—H6B109.3
C12—C10—H10A113.8C1—C5—C6101.1 (4)
O5—C15—N2122.7 (4)C1—C5—H5A111.6
O5—C15—C11129.7 (4)C6—C5—H5A111.6
N2—C15—C11107.5 (3)C1—C5—H5B111.6
C8—C3—C1112.6 (4)C6—C5—H5B111.6
C8—C3—C4105.2 (3)H5A—C5—H5B109.4
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