Literature DB >> 21581899

8-Phenyl-10-oxa-8-aza-tricyclo-[4.3.0.1]decane-7,9-dione.

Wen-Zhong Zhu1, Qiu-Yue Lin.   

Abstract

The reaction of aniline with norcantharidin produced the imide title compound, C(14)H(13)NO(3), which shows no significant hydrogen bonds in the crystal structure. The dihedral angle between the phenyl and pyrrolidine rings is 48.48 (6)°.

Entities:  

Year:  2009        PMID: 21581899      PMCID: PMC2968178          DOI: 10.1107/S1600536809000282

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of norcantharidin in synthesis see: Hill et al. (2007 ▶). For background, see: Wang (1989 ▶).

Experimental

Crystal data

C14H13NO3 M = 243.25 Monoclinic, a = 9.5914 (4) Å b = 8.4345 (3) Å c = 14.4101 (6) Å β = 93.468 (3)° V = 1163.62 (8) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 (2) K 0.32 × 0.25 × 0.04 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.971, T max = 0.996 18085 measured reflections 2699 independent reflections 1898 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.177 S = 0.61 2699 reflections 163 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809000282/at2701sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809000282/at2701Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13NO3F(000) = 512
Mr = 243.25Dx = 1.389 Mg m3Dm = 1.389 Mg m3Dm measured by not measured
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3324 reflections
a = 9.5914 (4) Åθ = 2.1–27.7°
b = 8.4345 (3) ŵ = 0.10 mm1
c = 14.4101 (6) ÅT = 296 K
β = 93.468 (3)°Sheet, colourless
V = 1163.62 (8) Å30.32 × 0.25 × 0.04 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2699 independent reflections
Radiation source: fine-focus sealed tube1898 reflections with I > 2σ(I)
graphiteRint = 0.041
φ and ω scansθmax = 27.7°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.971, Tmax = 0.996k = −11→10
18085 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.177H-atom parameters constrained
S = 0.61w = 1/[σ2(Fo2) + (0.1908P)2 + 0.6671P] where P = (Fo2 + 2Fc2)/3
2699 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.10268 (15)0.22038 (16)0.69370 (9)0.0418 (4)
O1−0.04620 (15)0.1156 (2)0.79702 (10)0.0655 (4)
O20.19084 (14)0.33610 (17)0.56481 (9)0.0579 (4)
O3−0.13027 (14)0.06451 (14)0.54810 (10)0.0526 (4)
C10.32246 (19)0.0814 (2)0.68510 (13)0.0513 (4)
H1A0.30260.06650.62170.062*
C20.4439 (2)0.0209 (3)0.72752 (17)0.0620 (5)
H2A0.5055−0.03580.69270.074*
C30.4743 (2)0.0442 (3)0.82150 (17)0.0646 (6)
H3A0.55620.00340.84990.078*
C40.3832 (2)0.1278 (2)0.87295 (15)0.0599 (5)
H4A0.40420.14350.93610.072*
C50.2603 (2)0.1891 (2)0.83178 (13)0.0493 (4)
H5A0.19890.24570.86680.059*
C60.23040 (18)0.16445 (19)0.73715 (12)0.0421 (4)
C70.09220 (19)0.29901 (19)0.60787 (11)0.0432 (4)
C8−0.05956 (18)0.32348 (19)0.57997 (11)0.0432 (4)
H8A−0.08200.43490.56680.052*
C9−0.1114 (2)0.2122 (2)0.50018 (13)0.0502 (4)
H9A−0.04850.20540.44920.060*
C10−0.2605 (2)0.2614 (3)0.46982 (14)0.0592 (5)
H10A−0.29060.21480.41040.071*
H10B−0.26960.37580.46590.071*
C11−0.3429 (2)0.1933 (2)0.54908 (16)0.0585 (5)
H11A−0.39310.27560.58020.070*
H11B−0.40820.11200.52670.070*
C12−0.22552 (19)0.1238 (2)0.61262 (14)0.0488 (4)
H12A−0.25700.04320.65560.059*
C13−0.13944 (18)0.25713 (19)0.66061 (11)0.0430 (4)
H13A−0.19730.33690.68940.052*
C14−0.02839 (18)0.1892 (2)0.72702 (12)0.0449 (4)
U11U22U33U12U13U23
N10.0422 (8)0.0437 (7)0.0400 (7)0.0010 (6)0.0060 (6)0.0082 (6)
O10.0549 (8)0.0882 (11)0.0546 (8)0.0025 (7)0.0131 (6)0.0281 (7)
O20.0542 (8)0.0651 (8)0.0555 (8)−0.0097 (6)0.0127 (6)0.0158 (6)
O30.0538 (7)0.0369 (6)0.0678 (8)0.0025 (5)0.0099 (6)−0.0059 (5)
C10.0465 (10)0.0543 (10)0.0534 (10)−0.0008 (8)0.0072 (8)−0.0011 (8)
C20.0440 (10)0.0628 (12)0.0799 (14)0.0028 (9)0.0097 (9)0.0026 (10)
C30.0417 (10)0.0654 (13)0.0851 (15)−0.0065 (9)−0.0098 (10)0.0115 (11)
C40.0588 (12)0.0611 (12)0.0580 (11)−0.0136 (9)−0.0121 (9)0.0061 (9)
C50.0533 (10)0.0465 (9)0.0481 (9)−0.0053 (8)0.0025 (8)0.0012 (7)
C60.0414 (8)0.0397 (8)0.0456 (9)−0.0038 (6)0.0042 (7)0.0050 (7)
C70.0486 (9)0.0398 (8)0.0415 (8)−0.0053 (7)0.0059 (7)0.0044 (6)
C80.0490 (9)0.0359 (8)0.0444 (9)−0.0014 (7)0.0015 (7)0.0053 (6)
C90.0568 (11)0.0490 (9)0.0450 (9)−0.0032 (8)0.0053 (8)−0.0019 (7)
C100.0640 (13)0.0534 (10)0.0579 (11)−0.0032 (9)−0.0139 (9)−0.0036 (9)
C110.0462 (10)0.0540 (11)0.0741 (13)0.0006 (8)−0.0060 (9)−0.0081 (9)
C120.0434 (9)0.0398 (8)0.0639 (11)−0.0005 (7)0.0090 (8)0.0043 (8)
C130.0441 (9)0.0396 (8)0.0459 (9)0.0050 (7)0.0082 (7)0.0018 (7)
C140.0434 (9)0.0472 (9)0.0450 (9)0.0024 (7)0.0100 (7)0.0044 (7)
N1—C141.398 (2)C5—H5A0.9300
N1—C71.402 (2)C7—C81.501 (2)
N1—C61.422 (2)C8—C131.536 (2)
O1—C141.205 (2)C8—C91.543 (2)
O2—C71.204 (2)C8—H8A0.9800
O3—C121.433 (2)C9—C101.528 (3)
O3—C91.441 (2)C9—H9A0.9800
C1—C21.380 (3)C10—C111.539 (3)
C1—C61.383 (2)C10—H10A0.9700
C1—H1A0.9300C10—H10B0.9700
C2—C31.382 (3)C11—C121.525 (3)
C2—H2A0.9300C11—H11A0.9700
C3—C41.374 (3)C11—H11B0.9700
C3—H3A0.9300C12—C131.535 (2)
C4—C51.387 (3)C12—H12A0.9800
C4—H4A0.9300C13—C141.502 (2)
C5—C61.392 (3)C13—H13A0.9800
C14—N1—C7111.99 (14)O3—C9—C8102.29 (14)
C14—N1—C6123.71 (14)C10—C9—C8107.58 (15)
C7—N1—C6124.01 (14)O3—C9—H9A114.2
C12—O3—C996.47 (12)C10—C9—H9A114.2
C2—C1—C6119.77 (18)C8—C9—H9A114.2
C2—C1—H1A120.1C9—C10—C11101.54 (15)
C6—C1—H1A120.1C9—C10—H10A111.5
C1—C2—C3120.2 (2)C11—C10—H10A111.5
C1—C2—H2A119.9C9—C10—H10B111.5
C3—C2—H2A119.9C11—C10—H10B111.5
C4—C3—C2119.91 (19)H10A—C10—H10B109.3
C4—C3—H3A120.0C12—C11—C10101.26 (16)
C2—C3—H3A120.0C12—C11—H11A111.5
C3—C4—C5120.8 (2)C10—C11—H11A111.5
C3—C4—H4A119.6C12—C11—H11B111.5
C5—C4—H4A119.6C10—C11—H11B111.5
C4—C5—C6118.85 (18)H11A—C11—H11B109.3
C4—C5—H5A120.6O3—C12—C11102.78 (16)
C6—C5—H5A120.6O3—C12—C13101.63 (13)
C1—C6—C5120.45 (17)C11—C12—C13110.30 (14)
C1—C6—N1119.36 (16)O3—C12—H12A113.7
C5—C6—N1120.16 (16)C11—C12—H12A113.7
O2—C7—N1124.14 (17)C13—C12—H12A113.7
O2—C7—C8127.30 (15)C14—C13—C12110.43 (14)
N1—C7—C8108.55 (14)C14—C13—C8104.73 (14)
C7—C8—C13105.51 (13)C12—C13—C8101.86 (13)
C7—C8—C9112.30 (14)C14—C13—H13A113.0
C13—C8—C9100.91 (14)C12—C13—H13A113.0
C7—C8—H8A112.5C8—C13—H13A113.0
C13—C8—H8A112.5O1—C14—N1124.09 (17)
C9—C8—H8A112.5O1—C14—C13126.79 (16)
O3—C9—C10103.26 (15)N1—C14—C13109.10 (14)
C6—C1—C2—C3−0.6 (3)C13—C8—C9—C1074.97 (17)
C1—C2—C3—C40.1 (3)O3—C9—C10—C1131.94 (17)
C2—C3—C4—C50.2 (3)C8—C9—C10—C11−75.77 (17)
C3—C4—C5—C60.0 (3)C9—C10—C11—C122.39 (18)
C2—C1—C6—C50.8 (3)C9—O3—C12—C1156.48 (16)
C2—C1—C6—N1−177.25 (17)C9—O3—C12—C13−57.71 (15)
C4—C5—C6—C1−0.6 (3)C10—C11—C12—O3−36.30 (17)
C4—C5—C6—N1177.52 (16)C10—C11—C12—C1371.41 (18)
C14—N1—C6—C1126.96 (18)O3—C12—C13—C14−74.48 (16)
C7—N1—C6—C1−46.3 (2)C11—C12—C13—C14177.05 (15)
C14—N1—C6—C5−51.1 (2)O3—C12—C13—C836.33 (16)
C7—N1—C6—C5135.62 (17)C11—C12—C13—C8−72.14 (17)
C14—N1—C7—O2−178.77 (17)C7—C8—C13—C14−3.54 (17)
C6—N1—C7—O2−4.8 (3)C9—C8—C13—C14113.50 (15)
C14—N1—C7—C8−0.10 (19)C7—C8—C13—C12−118.62 (14)
C6—N1—C7—C8173.85 (14)C9—C8—C13—C12−1.58 (16)
O2—C7—C8—C13−179.03 (18)C7—N1—C14—O1176.01 (17)
N1—C7—C8—C132.35 (18)C6—N1—C14—O12.0 (3)
O2—C7—C8—C971.9 (2)C7—N1—C14—C13−2.3 (2)
N1—C7—C8—C9−106.67 (16)C6—N1—C14—C13−176.26 (14)
C12—O3—C9—C10−54.79 (16)C12—C13—C14—O1−65.7 (2)
C12—O3—C9—C856.86 (16)C8—C13—C14—O1−174.64 (18)
C7—C8—C9—O378.51 (17)C12—C13—C14—N1112.55 (16)
C13—C8—C9—O3−33.41 (16)C8—C13—C14—N13.61 (18)
C7—C8—C9—C10−173.12 (14)
D—H···AD—HH···AD···AD—H···A
C10—H10B···O2i0.972.593.502 (3)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C10—H10B⋯O2i0.972.593.502 (3)156

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Medical uses of mylabris in ancient China and recent studies.

Authors:  G S Wang
Journal:  J Ethnopharmacol       Date:  1989-09       Impact factor: 4.360

3.  Norcantharimides, synthesis and anticancer activity: Synthesis of new norcantharidin analogues and their anticancer evaluation.

Authors:  Timothy A Hill; Scott G Stewart; Stephen P Ackland; Jayne Gilbert; Benjamin Sauer; Jennette A Sakoff; Adam McCluskey
Journal:  Bioorg Med Chem       Date:  2007-06-20       Impact factor: 3.641

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Authors:  Shi-Kun Li; Fan Zhang; Tian-Xi Lv; Qiu-Yue Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09

3.  4-(3,5-Dioxo-10-oxa-4-aza-tricyclo-[5.2.1.0]decan-4-yl)-10-oxa-4-aza-tricyclo-[5.2.1.0]decane-3,5-dione.

Authors:  Peng-Peng Wang; Qiu-Yue Lin; Fan Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-14
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