Literature DB >> 22346997

3-(3-Chloro-phenyl-sulfin-yl)-2,4,6-trimethyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C(17)H(15)ClO(2)S, the 3-chloro-phenyl ring makes a dihedral angle of 71.46 (4)° with the mean plane of the benzofuran fragment. In the crystal, mol-ecules are linked by weak C-H⋯O hydrogen bonds and a slipped π-π inter-action between the 3-chloro-phenyl rings of adjacent mol-ecules [centroid-centroid distance = 3.630 (2) Å, inter-planar distance = 3.375 (2) Å and slippage = 1.337 (2) Å].

Entities:  

Year:  2012        PMID: 22346997      PMCID: PMC3275052          DOI: 10.1107/S160053681200027X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2009 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For the crystal structures of related compounds, see: Choi et al. (2010 ▶); Seo et al. (2011 ▶).

Experimental

Crystal data

C17H15ClO2S M = 318.80 Triclinic, a = 6.7900 (2) Å b = 8.1288 (3) Å c = 14.6813 (5) Å α = 76.763 (2)° β = 84.145 (2)° γ = 73.241 (2)° V = 754.73 (4) Å3 Z = 2 Mo Kα radiation μ = 0.39 mm−1 T = 173 K 0.28 × 0.25 × 0.21 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.675, T max = 0.746 14017 measured reflections 3704 independent reflections 3182 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.105 S = 1.05 3704 reflections 193 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.42 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681200027X/pv2502sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681200027X/pv2502Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681200027X/pv2502Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15ClO2SZ = 2
Mr = 318.80F(000) = 332
Triclinic, P1Dx = 1.403 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.7900 (2) ÅCell parameters from 6373 reflections
b = 8.1288 (3) Åθ = 2.7–28.1°
c = 14.6813 (5) ŵ = 0.39 mm1
α = 76.763 (2)°T = 173 K
β = 84.145 (2)°Block, colourless
γ = 73.241 (2)°0.28 × 0.25 × 0.21 mm
V = 754.73 (4) Å3
Bruker SMART APEXII CCD diffractometer3704 independent reflections
Radiation source: rotating anode3182 reflections with I > 2σ(I)
graphite multilayerRint = 0.030
Detector resolution: 10.0 pixels mm-1θmax = 28.3°, θmin = 1.4°
φ and ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −10→10
Tmin = 0.675, Tmax = 0.746l = −19→19
14017 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: difference Fourier map
wR(F2) = 0.105H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0546P)2 + 0.219P] where P = (Fo2 + 2Fc2)/3
3704 reflections(Δ/σ)max = 0.001
193 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.98398 (6)0.23182 (6)0.99982 (3)0.04624 (14)
S10.46056 (6)0.83926 (5)0.83535 (3)0.03407 (12)
O10.14598 (16)0.96772 (15)0.61039 (8)0.0363 (3)
O20.65568 (19)0.88857 (16)0.83626 (9)0.0443 (3)
C10.3829 (2)0.8720 (2)0.72075 (11)0.0312 (3)
C20.4775 (2)0.80409 (19)0.63819 (10)0.0300 (3)
C30.6724 (2)0.7063 (2)0.61075 (11)0.0336 (3)
C40.6909 (2)0.6719 (2)0.52105 (12)0.0368 (3)
H40.82080.60540.50090.044*
C50.5309 (3)0.7288 (2)0.45904 (11)0.0367 (3)
C60.3406 (3)0.8309 (2)0.48513 (11)0.0375 (3)
H60.22890.87450.44420.045*
C70.3229 (2)0.8653 (2)0.57378 (11)0.0325 (3)
C80.1876 (2)0.9692 (2)0.69925 (11)0.0336 (3)
C90.8536 (3)0.6437 (3)0.67277 (13)0.0448 (4)
H9A0.85150.53090.71410.067*
H9B0.84620.73030.71060.067*
H9C0.98130.62910.63400.067*
C100.5634 (3)0.6788 (3)0.36442 (12)0.0464 (4)
H10A0.53960.56330.37060.070*
H10B0.70470.67410.34080.070*
H10C0.46670.76650.32050.070*
C110.0176 (3)1.0752 (2)0.75130 (13)0.0432 (4)
H11A0.06671.07880.81110.065*
H11B−0.09721.02170.76300.065*
H11C−0.02881.19500.71410.065*
C120.5290 (2)0.6027 (2)0.86348 (10)0.0302 (3)
C130.7090 (2)0.5182 (2)0.91058 (10)0.0317 (3)
H130.79540.58300.92340.038*
C140.7601 (2)0.3376 (2)0.93850 (11)0.0326 (3)
C150.6376 (2)0.2399 (2)0.92032 (11)0.0339 (3)
H150.67620.11550.93940.041*
C160.4574 (3)0.3280 (2)0.87360 (11)0.0355 (3)
H160.37160.26290.86060.043*
C170.4002 (2)0.5095 (2)0.84550 (11)0.0339 (3)
H170.27530.56900.81450.041*
U11U22U33U12U13U23
Cl10.0373 (2)0.0353 (2)0.0654 (3)−0.00594 (17)−0.00790 (18)−0.01169 (19)
S10.0379 (2)0.0264 (2)0.0417 (2)−0.00941 (16)0.00082 (15)−0.01471 (16)
O10.0268 (5)0.0343 (6)0.0432 (6)−0.0021 (4)0.0024 (4)−0.0087 (5)
O20.0469 (7)0.0333 (6)0.0612 (8)−0.0190 (5)−0.0072 (6)−0.0144 (6)
C10.0296 (7)0.0248 (7)0.0394 (8)−0.0070 (6)0.0034 (6)−0.0094 (6)
C20.0298 (7)0.0223 (7)0.0373 (7)−0.0073 (6)0.0040 (6)−0.0072 (6)
C30.0305 (7)0.0252 (7)0.0434 (8)−0.0060 (6)0.0043 (6)−0.0085 (6)
C40.0348 (8)0.0281 (8)0.0443 (8)−0.0054 (6)0.0103 (6)−0.0105 (6)
C50.0432 (9)0.0302 (8)0.0367 (8)−0.0127 (7)0.0082 (6)−0.0083 (6)
C60.0379 (8)0.0339 (9)0.0378 (8)−0.0083 (7)−0.0003 (6)−0.0043 (6)
C70.0286 (7)0.0254 (7)0.0401 (8)−0.0048 (6)0.0045 (6)−0.0061 (6)
C80.0307 (7)0.0277 (8)0.0417 (8)−0.0075 (6)0.0055 (6)−0.0094 (6)
C90.0308 (8)0.0460 (10)0.0539 (10)0.0006 (7)0.0003 (7)−0.0179 (8)
C100.0565 (11)0.0459 (11)0.0392 (9)−0.0175 (9)0.0098 (8)−0.0144 (8)
C110.0331 (8)0.0382 (9)0.0551 (10)−0.0038 (7)0.0090 (7)−0.0161 (8)
C120.0358 (7)0.0257 (7)0.0325 (7)−0.0109 (6)0.0039 (6)−0.0124 (6)
C130.0338 (7)0.0301 (8)0.0365 (8)−0.0126 (6)0.0022 (6)−0.0139 (6)
C140.0315 (7)0.0315 (8)0.0360 (7)−0.0069 (6)0.0035 (6)−0.0137 (6)
C150.0429 (8)0.0262 (8)0.0358 (7)−0.0111 (6)0.0057 (6)−0.0139 (6)
C160.0432 (8)0.0341 (8)0.0381 (8)−0.0196 (7)0.0034 (6)−0.0161 (6)
C170.0367 (8)0.0353 (8)0.0348 (7)−0.0139 (7)−0.0002 (6)−0.0130 (6)
Cl1—C141.7412 (16)C9—H9A0.9800
S1—O21.4928 (12)C9—H9B0.9800
S1—C11.7534 (16)C9—H9C0.9800
S1—C121.8009 (15)C10—H10A0.9800
O1—C81.3661 (19)C10—H10B0.9800
O1—C71.3863 (18)C10—H10C0.9800
C1—C81.360 (2)C11—H11A0.9800
C1—C21.459 (2)C11—H11B0.9800
C2—C71.389 (2)C11—H11C0.9800
C2—C31.406 (2)C12—C131.384 (2)
C3—C41.394 (2)C12—C171.389 (2)
C3—C91.502 (2)C13—C141.380 (2)
C4—C51.393 (2)C13—H130.9500
C4—H40.9500C14—C151.384 (2)
C5—C61.390 (2)C15—C161.386 (2)
C5—C101.513 (2)C15—H150.9500
C6—C71.379 (2)C16—C171.386 (2)
C6—H60.9500C16—H160.9500
C8—C111.486 (2)C17—H170.9500
O2—S1—C1111.41 (7)H9A—C9—H9C109.5
O2—S1—C12106.01 (7)H9B—C9—H9C109.5
C1—S1—C1298.39 (7)C5—C10—H10A109.5
C8—O1—C7106.59 (12)C5—C10—H10B109.5
C8—C1—C2107.12 (14)H10A—C10—H10B109.5
C8—C1—S1118.56 (12)C5—C10—H10C109.5
C2—C1—S1134.08 (12)H10A—C10—H10C109.5
C7—C2—C3118.49 (14)H10B—C10—H10C109.5
C7—C2—C1104.44 (13)C8—C11—H11A109.5
C3—C2—C1137.02 (14)C8—C11—H11B109.5
C4—C3—C2116.22 (15)H11A—C11—H11B109.5
C4—C3—C9121.02 (14)C8—C11—H11C109.5
C2—C3—C9122.75 (14)H11A—C11—H11C109.5
C5—C4—C3124.16 (15)H11B—C11—H11C109.5
C5—C4—H4117.9C13—C12—C17121.25 (14)
C3—C4—H4117.9C13—C12—S1116.72 (11)
C6—C5—C4119.45 (15)C17—C12—S1121.85 (12)
C6—C5—C10120.21 (16)C14—C13—C12118.42 (13)
C4—C5—C10120.34 (15)C14—C13—H13120.8
C7—C6—C5116.27 (15)C12—C13—H13120.8
C7—C6—H6121.9C13—C14—C15121.98 (15)
C5—C6—H6121.9C13—C14—Cl1118.34 (12)
C6—C7—O1123.93 (14)C15—C14—Cl1119.67 (12)
C6—C7—C2125.32 (14)C14—C15—C16118.42 (14)
O1—C7—C2110.75 (13)C14—C15—H15120.8
C1—C8—O1111.09 (13)C16—C15—H15120.8
C1—C8—C11133.38 (16)C17—C16—C15121.11 (14)
O1—C8—C11115.53 (14)C17—C16—H16119.4
C3—C9—H9A109.5C15—C16—H16119.4
C3—C9—H9B109.5C16—C17—C12118.80 (15)
H9A—C9—H9B109.5C16—C17—H17120.6
C3—C9—H9C109.5C12—C17—H17120.6
O2—S1—C1—C8−127.62 (13)C1—C2—C7—C6−178.73 (15)
C12—S1—C1—C8121.46 (13)C3—C2—C7—O1−176.29 (13)
O2—S1—C1—C258.83 (17)C1—C2—C7—O11.51 (16)
C12—S1—C1—C2−52.10 (16)C2—C1—C8—O11.05 (17)
C8—C1—C2—C7−1.54 (16)S1—C1—C8—O1−174.11 (10)
S1—C1—C2—C7172.54 (13)C2—C1—C8—C11−177.87 (17)
C8—C1—C2—C3175.63 (17)S1—C1—C8—C117.0 (3)
S1—C1—C2—C3−10.3 (3)C7—O1—C8—C1−0.11 (17)
C7—C2—C3—C4−2.9 (2)C7—O1—C8—C11179.01 (13)
C1—C2—C3—C4−179.79 (16)O2—S1—C12—C1322.00 (13)
C7—C2—C3—C9176.05 (15)C1—S1—C12—C13137.22 (12)
C1—C2—C3—C9−0.8 (3)O2—S1—C12—C17−162.87 (12)
C2—C3—C4—C50.4 (2)C1—S1—C12—C17−47.65 (13)
C9—C3—C4—C5−178.61 (16)C17—C12—C13—C140.9 (2)
C3—C4—C5—C61.9 (2)S1—C12—C13—C14176.04 (11)
C3—C4—C5—C10−177.54 (15)C12—C13—C14—C150.3 (2)
C4—C5—C6—C7−1.5 (2)C12—C13—C14—Cl1−178.73 (11)
C10—C5—C6—C7177.93 (14)C13—C14—C15—C16−0.8 (2)
C5—C6—C7—O1178.59 (14)Cl1—C14—C15—C16178.26 (12)
C5—C6—C7—C2−1.1 (2)C14—C15—C16—C170.1 (2)
C8—O1—C7—C6179.30 (15)C15—C16—C17—C121.1 (2)
C8—O1—C7—C2−0.93 (16)C13—C12—C17—C16−1.6 (2)
C3—C2—C7—C63.5 (2)S1—C12—C17—C16−176.51 (12)
D—H···AD—HH···AD···AD—H···A
C11—H11B···O2i0.982.303.249 (2)163.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11B⋯O2i0.982.303.249 (2)163

Symmetry code: (i) .

  8 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

6.  Antibacterial and antifungal activity of cicerfuran and related 2-arylbenzofurans and stilbenes.

Authors:  Shazia N Aslam; Philip C Stevenson; Tetsuo Kokubun; David R Hall
Journal:  Microbiol Res       Date:  2007-04-05       Impact factor: 5.415

7.  3-(4-Chloro-phenyl-sulfin-yl)-2,4,6-trimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-02

8.  3-(3-Fluoro-phenyl-sulfin-yl)-2,4,6-trimethyl-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29
  8 in total

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