Literature DB >> 21588917

3-(4-Chloro-phenyl-sulfin-yl)-2,4,6-trimethyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title mol-ecule, C(17)H(15)ClO(2)S, the 4-chloro-phenyl ring is oriented approximately perpendicular to the mean plane of the benzofuran ring [dihedral angle = 88.98 (4)°]. In the crystal, mol-ecules are linked through weak inter-molecular C-H⋯O and C-H⋯π inter-actions, forming right-hand pseudo-helices along the a axis.

Entities:  

Year:  2010        PMID: 21588917      PMCID: PMC3009119          DOI: 10.1107/S1600536810038419

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of related benzofuran derivatives, see: Choi et al. (2010a ▶,b ▶). For the biological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products containing benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶).

Experimental

Crystal data

C17H15ClO2S M = 318.80 Orthorhombic, a = 12.1259 (10) Å b = 19.3925 (16) Å c = 6.4744 (5) Å V = 1522.5 (2) Å3 Z = 4 Mo Kα radiation μ = 0.39 mm−1 T = 296 K 0.44 × 0.28 × 0.17 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.848, T max = 0.937 14409 measured reflections 3468 independent reflections 3134 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.089 S = 1.03 3468 reflections 194 parameters 1 restraint H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.24 e Å−3 Absolute structure: Flack (1983 ▶), 1561 Friedel pairs Flack parameter: −0.03 (6) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810038419/pv2330sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810038419/pv2330Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15ClO2SF(000) = 664
Mr = 318.80Dx = 1.391 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 5206 reflections
a = 12.1259 (10) Åθ = 2.7–26.9°
b = 19.3925 (16) ŵ = 0.39 mm1
c = 6.4744 (5) ÅT = 296 K
V = 1522.5 (2) Å3Block, colourless
Z = 40.44 × 0.28 × 0.17 mm
Bruker SMART APEXII CCD diffractometer3468 independent reflections
Radiation source: rotating anode3134 reflections with I > 2σ(I)
graphite multilayerRint = 0.028
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 2.0°
φ and ω scansh = −14→15
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −25→25
Tmin = 0.848, Tmax = 0.937l = −8→8
14409 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.089w = 1/[σ2(Fo2) + (0.0507P)2 + 0.1747P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3468 reflectionsΔρmax = 0.16 e Å3
194 parametersΔρmin = −0.24 e Å3
1 restraintAbsolute structure: Flack (1983), 1561 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.03 (6)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.58821 (4)0.24616 (2)0.00652 (10)0.04345 (12)
Cl0.49572 (6)0.44910 (4)0.73907 (14)0.0840 (2)
O10.32383 (10)0.13450 (6)−0.0716 (2)0.0445 (3)
O20.69629 (11)0.21294 (7)0.0504 (3)0.0574 (4)
C10.48058 (14)0.18533 (8)0.0312 (3)0.0377 (4)
C20.45571 (14)0.13178 (8)0.1815 (3)0.0373 (4)
C30.50175 (15)0.10563 (9)0.3645 (3)0.0418 (4)
C40.44487 (17)0.05245 (10)0.4608 (3)0.0483 (5)
H40.47390.03430.58210.058*
C50.34541 (15)0.02446 (10)0.3847 (4)0.0503 (5)
C60.30164 (16)0.04966 (9)0.2031 (4)0.0478 (5)
H60.23690.03190.14730.057*
C70.35838 (16)0.10246 (9)0.1083 (3)0.0400 (4)
C80.40014 (15)0.18465 (9)−0.1136 (3)0.0405 (4)
C90.60623 (18)0.13287 (11)0.4595 (3)0.0535 (5)
H9A0.58970.17280.54160.080*
H9B0.65710.14530.35210.080*
H9C0.63860.09790.54520.080*
C100.2873 (2)−0.03139 (12)0.5061 (6)0.0758 (7)
H10A0.2113−0.03340.46520.114*
H10B0.2919−0.02120.65090.114*
H10C0.3219−0.07500.47920.114*
C110.37730 (19)0.22734 (11)−0.2970 (4)0.0509 (5)
H11A0.31260.2547−0.27290.076*
H11B0.36540.1980−0.41440.076*
H11C0.43900.2571−0.32320.076*
C120.55633 (14)0.30025 (8)0.2240 (3)0.0390 (4)
C130.45411 (16)0.33225 (10)0.2400 (4)0.0485 (5)
H130.39860.32260.14530.058*
C140.43614 (17)0.37853 (10)0.3984 (4)0.0522 (5)
H140.36840.40060.41110.063*
C150.51924 (18)0.39180 (9)0.5371 (4)0.0491 (5)
C160.62023 (17)0.36065 (9)0.5241 (4)0.0497 (4)
H160.67480.36990.62110.060*
C170.63960 (16)0.31487 (10)0.3627 (4)0.0464 (5)
H170.70840.29420.34830.056*
U11U22U33U12U13U23
S0.0401 (2)0.0491 (2)0.0411 (2)−0.00916 (18)0.0045 (2)0.0011 (2)
Cl0.0895 (5)0.0805 (4)0.0819 (5)0.0023 (4)0.0111 (4)−0.0341 (4)
O10.0401 (7)0.0475 (7)0.0461 (8)−0.0058 (5)−0.0063 (6)0.0037 (6)
O20.0389 (7)0.0638 (8)0.0695 (11)−0.0017 (6)0.0088 (7)−0.0075 (8)
C10.0372 (8)0.0412 (8)0.0347 (9)−0.0036 (6)0.0007 (8)−0.0015 (7)
C20.0358 (9)0.0383 (8)0.0377 (9)0.0011 (7)0.0055 (8)−0.0016 (7)
C30.0408 (9)0.0443 (9)0.0403 (10)0.0061 (7)0.0006 (8)−0.0016 (8)
C40.0461 (10)0.0503 (10)0.0485 (12)0.0094 (8)0.0031 (9)0.0120 (8)
C50.0449 (11)0.0427 (9)0.0632 (14)0.0044 (7)0.0116 (10)0.0114 (9)
C60.0366 (9)0.0418 (8)0.0649 (14)−0.0034 (7)0.0024 (9)0.0049 (9)
C70.0381 (9)0.0405 (8)0.0416 (10)0.0022 (7)0.0013 (8)0.0001 (8)
C80.0407 (9)0.0428 (9)0.0380 (10)−0.0026 (7)0.0010 (8)−0.0006 (7)
C90.0506 (12)0.0615 (12)0.0485 (14)0.0018 (9)−0.0076 (10)0.0025 (9)
C100.0633 (14)0.0679 (13)0.096 (2)−0.0044 (11)0.0056 (16)0.0395 (15)
C110.0522 (11)0.0588 (11)0.0416 (11)−0.0017 (10)−0.0031 (9)0.0068 (9)
C120.0379 (9)0.0373 (8)0.0417 (10)−0.0054 (7)−0.0014 (8)0.0037 (8)
C130.0431 (10)0.0481 (10)0.0542 (12)−0.0012 (8)−0.0102 (10)0.0042 (9)
C140.0441 (10)0.0460 (10)0.0666 (14)0.0061 (8)−0.0001 (10)0.0011 (10)
C150.0583 (12)0.0382 (9)0.0508 (12)−0.0032 (8)0.0049 (10)−0.0034 (9)
C160.0481 (10)0.0501 (10)0.0509 (12)−0.0060 (8)−0.0088 (11)−0.0027 (10)
C170.0358 (9)0.0481 (9)0.0553 (13)−0.0030 (8)−0.0046 (9)−0.0018 (9)
S—O21.4878 (15)C9—H9A0.9600
S—C11.7665 (17)C9—H9B0.9600
S—C121.798 (2)C9—H9C0.9600
Cl—C151.740 (2)C10—H10A0.9600
O1—C81.370 (2)C10—H10B0.9600
O1—C71.385 (2)C10—H10C0.9600
C1—C81.353 (3)C11—H11A0.9600
C1—C21.455 (2)C11—H11B0.9600
C2—C71.393 (3)C11—H11C0.9600
C2—C31.405 (3)C12—C171.381 (3)
C3—C41.389 (3)C12—C131.390 (3)
C3—C91.504 (3)C13—C141.380 (3)
C4—C51.411 (3)C13—H130.9300
C4—H40.9300C14—C151.374 (3)
C5—C61.379 (3)C14—H140.9300
C5—C101.512 (3)C15—C161.368 (3)
C6—C71.378 (3)C16—C171.391 (3)
C6—H60.9300C16—H160.9300
C8—C111.474 (3)C17—H170.9300
O2—S—C1110.14 (8)H9A—C9—H9C109.5
O2—S—C12107.01 (9)H9B—C9—H9C109.5
C1—S—C1299.20 (8)C5—C10—H10A109.5
C8—O1—C7106.32 (15)C5—C10—H10B109.5
C8—C1—C2107.89 (15)H10A—C10—H10B109.5
C8—C1—S118.45 (14)C5—C10—H10C109.5
C2—C1—S133.66 (14)H10A—C10—H10C109.5
C7—C2—C3118.46 (16)H10B—C10—H10C109.5
C7—C2—C1103.84 (16)C8—C11—H11A109.5
C3—C2—C1137.70 (17)C8—C11—H11B109.5
C4—C3—C2116.71 (17)H11A—C11—H11B109.5
C4—C3—C9119.73 (19)C8—C11—H11C109.5
C2—C3—C9123.55 (18)H11A—C11—H11C109.5
C3—C4—C5123.59 (19)H11B—C11—H11C109.5
C3—C4—H4118.2C17—C12—C13120.78 (18)
C5—C4—H4118.2C17—C12—S118.16 (14)
C6—C5—C4119.37 (18)C13—C12—S120.72 (15)
C6—C5—C10121.2 (2)C14—C13—C12119.13 (19)
C4—C5—C10119.5 (2)C14—C13—H13120.4
C7—C6—C5116.80 (19)C12—C13—H13120.4
C7—C6—H6121.6C15—C14—C13119.45 (18)
C5—C6—H6121.6C15—C14—H14120.3
C6—C7—O1123.85 (18)C13—C14—H14120.3
C6—C7—C2125.07 (18)C16—C15—C14122.23 (19)
O1—C7—C2111.06 (15)C16—C15—Cl118.38 (18)
C1—C8—O1110.88 (17)C14—C15—Cl119.39 (16)
C1—C8—C11133.50 (17)C15—C16—C17118.6 (2)
O1—C8—C11115.58 (16)C15—C16—H16120.7
C3—C9—H9A109.5C17—C16—H16120.7
C3—C9—H9B109.5C12—C17—C16119.75 (18)
H9A—C9—H9B109.5C12—C17—H17120.1
C3—C9—H9C109.5C16—C17—H17120.1
O2—S—C1—C8−136.54 (15)C1—C2—C7—C6−178.86 (18)
C12—S—C1—C8111.43 (16)C3—C2—C7—O1179.46 (15)
O2—S—C1—C243.6 (2)C1—C2—C7—O1−0.29 (19)
C12—S—C1—C2−68.45 (18)C2—C1—C8—O1−0.3 (2)
C8—C1—C2—C70.3 (2)S—C1—C8—O1179.82 (13)
S—C1—C2—C7−179.78 (15)C2—C1—C8—C11177.3 (2)
C8—C1—C2—C3−179.3 (2)S—C1—C8—C11−2.6 (3)
S—C1—C2—C30.6 (3)C7—O1—C8—C10.1 (2)
C7—C2—C3—C4−0.9 (3)C7—O1—C8—C11−177.95 (16)
C1—C2—C3—C4178.8 (2)O2—S—C12—C1714.13 (17)
C7—C2—C3—C9−179.91 (18)C1—S—C12—C17128.60 (15)
C1—C2—C3—C9−0.3 (3)O2—S—C12—C13−172.53 (15)
C2—C3—C4—C5−0.1 (3)C1—S—C12—C13−58.05 (16)
C9—C3—C4—C5178.97 (19)C17—C12—C13—C14−0.7 (3)
C3—C4—C5—C61.1 (3)S—C12—C13—C14−173.88 (15)
C3—C4—C5—C10−177.4 (2)C12—C13—C14—C15−0.3 (3)
C4—C5—C6—C7−1.1 (3)C13—C14—C15—C160.1 (3)
C10—C5—C6—C7177.4 (2)C13—C14—C15—Cl−178.98 (17)
C5—C6—C7—O1−178.26 (17)C14—C15—C16—C171.0 (3)
C5—C6—C7—C20.1 (3)Cl—C15—C16—C17−179.89 (16)
C8—O1—C7—C6178.73 (19)C13—C12—C17—C161.8 (3)
C8—O1—C7—C20.14 (19)S—C12—C17—C16175.18 (16)
C3—C2—C7—C60.9 (3)C15—C16—C17—C12−2.0 (3)
Cg is the centroid of the C12–C17 4-chlorophenyl ring.
D—H···AD—HH···AD···AD—H···A
C13—H13···O2i0.932.623.471 (2)152
C11—H11C···Cgii0.962.853.667 (2)144
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C12–C17 4-chloro­phenyl ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13⋯O2i0.932.623.471 (2)152
C11—H11CCgii0.962.853.667 (2)144

Symmetry codes: (i) ; (ii) .

  7 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

6.  3-(4-Chloro-phenyl-sulfin-yl)-2,5,7-tri-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-18

7.  3-(4-Chloro-phenyl-sulfin-yl)-2,5-dimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-11
  7 in total
  4 in total

1.  3-[(4-Chloro-phen-yl)sulfin-yl]-2,4,6,7-tetra-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-06

2.  3-(3-Chloro-phenyl-sulfin-yl)-2,4,6-trimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-14

3.  3-(3-Fluoro-phenyl-sulfin-yl)-2,4,6-trimethyl-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29

4.  3-(4-Bromo-phenyl-sulfin-yl)-2,4,6-trimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-18
  4 in total

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