| Literature DB >> 22346995 |
Lyall R Hanton1, Stephen C Moratti, Zheng Shi, Jim Simpson.
Abstract
The title compound, C(7)H(6)OS, crystallizes with two similar mol-ecules, 1 and 2, in the asymmetric unit. Both mol-ecules are essentially planar with r.m.s. deviations of 0.0193 and 0.0107 Å for the planes through the nine non-H atoms of mol-ecules 1 and 2, respectively. The thio-phene and 4,5-dihydro-cyclo-penta-dienone rings are inclined at 2.40 (13)° in 1 and 0.64 (13)° in 2. In the crystal structure π-π [3.6542 (17) Å] and C-H⋯π contacts stack the mol-ecules into columns in an inverse fashion along the b axis. An extensive series of C-H⋯O hydrogen bonds links the columns, generating an extended network structure.Entities:
Year: 2012 PMID: 22346995 PMCID: PMC3275050 DOI: 10.1107/S1600536811056042
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H6OS | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1413 reflections | |
| θ = 3.1–22.0° | |
| µ = 0.42 mm−1 | |
| α = 83.247 (8)° | |
| β = 86.097 (7)° | Rectangular plate, yellow |
| γ = 71.363 (8)° | 0.55 × 0.28 × 0.02 mm |
| Bruker APEXII CCD area-detector diffractometer | 1522 independent reflections |
| Radiation source: fine-focus sealed tube | 1264 reflections with |
| graphite | |
| ω scans | θmax = 22.1°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 5251 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1522 reflections | (Δ/σ)max < 0.001 |
| 163 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.46716 (12) | 0.59750 (11) | 0.65016 (6) | 0.0210 (3) | |
| C12 | 0.6994 (5) | 0.5881 (4) | 0.5819 (2) | 0.0205 (8) | |
| H12 | 0.7031 | 0.6465 | 0.5148 | 0.025* | |
| C13 | 0.8795 (5) | 0.4873 (4) | 0.6343 (2) | 0.0196 (8) | |
| H13 | 1.0213 | 0.4668 | 0.6078 | 0.024* | |
| C14 | 0.9491 (5) | 0.3065 (4) | 0.8221 (2) | 0.0193 (8) | |
| H14A | 1.0453 | 0.3705 | 0.8447 | 0.023* | |
| H14B | 1.0345 | 0.1774 | 0.8064 | 0.023* | |
| C15 | 0.7725 (5) | 0.2999 (4) | 0.9031 (2) | 0.0196 (8) | |
| H15A | 0.7831 | 0.1670 | 0.9267 | 0.023* | |
| H15B | 0.7872 | 0.3637 | 0.9619 | 0.023* | |
| C16 | 0.5581 (5) | 0.4015 (4) | 0.8544 (2) | 0.0195 (8) | |
| O1 | 0.3814 (3) | 0.4238 (3) | 0.89458 (15) | 0.0248 (6) | |
| C17 | 0.6113 (5) | 0.4662 (4) | 0.7517 (2) | 0.0176 (8) | |
| C18 | 0.8269 (5) | 0.4181 (4) | 0.7325 (2) | 0.0165 (7) | |
| S2 | 0.47328 (13) | 0.09696 (11) | 0.12918 (6) | 0.0222 (3) | |
| C22 | 0.2153 (5) | 0.2131 (4) | 0.0920 (2) | 0.0228 (8) | |
| H22 | 0.1814 | 0.2782 | 0.0266 | 0.027* | |
| C23 | 0.0655 (5) | 0.2020 (4) | 0.1654 (2) | 0.0223 (8) | |
| H23 | −0.0840 | 0.2574 | 0.1574 | 0.027* | |
| C24 | 0.0802 (5) | 0.0432 (4) | 0.3591 (2) | 0.0198 (8) | |
| H24A | −0.0149 | −0.0345 | 0.3558 | 0.024* | |
| H24B | 0.0024 | 0.1568 | 0.3937 | 0.024* | |
| C25 | 0.2881 (5) | −0.0727 (4) | 0.4135 (2) | 0.0185 (8) | |
| H25A | 0.3004 | −0.0146 | 0.4749 | 0.022* | |
| H25B | 0.2877 | −0.2040 | 0.4339 | 0.022* | |
| C26 | 0.4739 (5) | −0.0725 (4) | 0.3396 (2) | 0.0170 (8) | |
| O2 | 0.6635 (3) | −0.1458 (3) | 0.35756 (15) | 0.0232 (6) | |
| C27 | 0.3776 (5) | 0.0332 (4) | 0.2462 (2) | 0.0181 (8) | |
| C28 | 0.1598 (5) | 0.0976 (4) | 0.2551 (2) | 0.0181 (8) |
| S1 | 0.0114 (5) | 0.0241 (6) | 0.0242 (5) | −0.0009 (4) | −0.0045 (4) | −0.0007 (4) |
| C12 | 0.0189 (19) | 0.0248 (19) | 0.0193 (17) | −0.0099 (15) | −0.0005 (14) | 0.0000 (14) |
| C13 | 0.0099 (18) | 0.0216 (18) | 0.0250 (19) | −0.0011 (14) | 0.0014 (14) | −0.0048 (14) |
| C14 | 0.0125 (18) | 0.0215 (19) | 0.0229 (18) | −0.0037 (14) | −0.0018 (14) | −0.0020 (14) |
| C15 | 0.0166 (19) | 0.0200 (18) | 0.0207 (17) | −0.0040 (14) | −0.0017 (14) | −0.0011 (14) |
| C16 | 0.016 (2) | 0.0171 (19) | 0.0265 (18) | −0.0050 (15) | −0.0030 (16) | −0.0075 (14) |
| O1 | 0.0106 (14) | 0.0311 (14) | 0.0318 (13) | −0.0052 (10) | 0.0044 (11) | −0.0061 (10) |
| C17 | 0.0100 (18) | 0.0170 (18) | 0.0236 (17) | −0.0007 (14) | −0.0049 (13) | −0.0014 (14) |
| C18 | 0.0117 (18) | 0.0167 (17) | 0.0217 (18) | −0.0041 (13) | 0.0000 (13) | −0.0049 (14) |
| S2 | 0.0177 (6) | 0.0271 (6) | 0.0217 (5) | −0.0079 (4) | 0.0016 (4) | −0.0014 (4) |
| C22 | 0.023 (2) | 0.0224 (19) | 0.0212 (18) | −0.0055 (15) | −0.0037 (15) | 0.0044 (14) |
| C23 | 0.0154 (19) | 0.0226 (19) | 0.0283 (19) | −0.0038 (15) | −0.0057 (16) | −0.0032 (15) |
| C24 | 0.0124 (18) | 0.0219 (18) | 0.0239 (18) | −0.0038 (14) | −0.0001 (14) | −0.0025 (14) |
| C25 | 0.0167 (19) | 0.0197 (18) | 0.0176 (17) | −0.0037 (14) | −0.0044 (14) | 0.0013 (14) |
| C26 | 0.015 (2) | 0.0152 (17) | 0.0217 (18) | −0.0043 (14) | −0.0002 (14) | −0.0057 (13) |
| O2 | 0.0094 (14) | 0.0281 (14) | 0.0284 (13) | −0.0010 (10) | −0.0032 (10) | −0.0003 (10) |
| C27 | 0.0125 (19) | 0.0203 (19) | 0.0222 (17) | −0.0049 (14) | 0.0008 (14) | −0.0064 (14) |
| C28 | 0.0138 (18) | 0.0189 (18) | 0.0221 (18) | −0.0047 (14) | −0.0013 (14) | −0.0052 (14) |
| S1—C12 | 1.716 (3) | S2—C27 | 1.716 (3) |
| S1—C17 | 1.723 (3) | S2—C22 | 1.726 (3) |
| C12—C13 | 1.375 (4) | C22—C23 | 1.359 (4) |
| C12—H12 | 0.9500 | C22—H22 | 0.9500 |
| C13—C18 | 1.412 (4) | C23—C28 | 1.413 (4) |
| C13—H13 | 0.9500 | C23—H23 | 0.9500 |
| C14—C18 | 1.497 (4) | C24—C28 | 1.506 (4) |
| C14—C15 | 1.543 (4) | C24—C25 | 1.547 (4) |
| C14—H14A | 0.9900 | C24—H24A | 0.9900 |
| C14—H14B | 0.9900 | C24—H24B | 0.9900 |
| C15—C16 | 1.526 (4) | C25—C26 | 1.522 (4) |
| C15—H15A | 0.9900 | C25—H25A | 0.9900 |
| C15—H15B | 0.9900 | C25—H25B | 0.9900 |
| C16—O1 | 1.221 (4) | C26—O2 | 1.225 (4) |
| C16—C17 | 1.456 (4) | C26—C27 | 1.461 (4) |
| C17—C18 | 1.368 (4) | C27—C28 | 1.366 (4) |
| C12—S1—C17 | 90.47 (15) | C27—S2—C22 | 89.93 (15) |
| C13—C12—S1 | 113.1 (2) | C23—C22—S2 | 113.3 (2) |
| C13—C12—H12 | 123.5 | C23—C22—H22 | 123.3 |
| S1—C12—H12 | 123.5 | S2—C22—H22 | 123.3 |
| C12—C13—C18 | 111.3 (3) | C22—C23—C28 | 111.6 (3) |
| C12—C13—H13 | 124.3 | C22—C23—H23 | 124.2 |
| C18—C13—H13 | 124.3 | C28—C23—H23 | 124.2 |
| C18—C14—C15 | 103.4 (2) | C28—C24—C25 | 103.1 (2) |
| C18—C14—H14A | 111.1 | C28—C24—H24A | 111.1 |
| C15—C14—H14A | 111.1 | C25—C24—H24A | 111.1 |
| C18—C14—H14B | 111.1 | C28—C24—H24B | 111.1 |
| C15—C14—H14B | 111.1 | C25—C24—H24B | 111.1 |
| H14A—C14—H14B | 109.0 | H24A—C24—H24B | 109.1 |
| C16—C15—C14 | 107.4 (2) | C26—C25—C24 | 107.4 (2) |
| C16—C15—H15A | 110.2 | C26—C25—H25A | 110.2 |
| C14—C15—H15A | 110.2 | C24—C25—H25A | 110.2 |
| C16—C15—H15B | 110.2 | C26—C25—H25B | 110.2 |
| C14—C15—H15B | 110.2 | C24—C25—H25B | 110.2 |
| H15A—C15—H15B | 108.5 | H25A—C25—H25B | 108.5 |
| O1—C16—C17 | 128.2 (3) | O2—C26—C27 | 128.6 (3) |
| O1—C16—C15 | 126.6 (3) | O2—C26—C25 | 125.8 (3) |
| C17—C16—C15 | 105.1 (3) | C27—C26—C25 | 105.6 (3) |
| C18—C17—C16 | 112.5 (3) | C28—C27—C26 | 112.0 (3) |
| C18—C17—S1 | 112.4 (2) | C28—C27—S2 | 112.9 (2) |
| C16—C17—S1 | 135.1 (2) | C26—C27—S2 | 135.1 (2) |
| C17—C18—C13 | 112.7 (3) | C27—C28—C23 | 112.3 (3) |
| C17—C18—C14 | 111.5 (3) | C27—C28—C24 | 111.8 (3) |
| C13—C18—C14 | 135.8 (3) | C23—C28—C24 | 135.8 (3) |
| Cg1 and Cg4 are the centroids of the S1,C12,C13,C17,C18 and S2,C22,C23,C27,C28 thiophene rings, respectively. |
| H··· | ||||
| C14—H14A···O1i | 0.99 | 2.52 | 3.473 (4) | 160. |
| C15—H15B···O1ii | 0.99 | 2.59 | 3.489 (3) | 151. |
| C12—H12···O2iii | 0.95 | 2.43 | 3.370 (4) | 168. |
| C13—H13···O2iv | 0.95 | 2.65 | 3.275 (4) | 124. |
| C23—H23···O1v | 0.95 | 2.62 | 3.425 (4) | 143. |
| C24—H24A···O2vi | 0.99 | 2.52 | 3.480 (4) | 164. |
| C25—H25A···O2vii | 0.99 | 2.71 | 3.704 (3) | 180. |
| C25—H25B···Cg1viii | 0.99 | 2.79 | 3.561 (3) | 135 |
| C15—H15A···Cg4iii | 0.99 | 2.84 | 3.571 (3) | 131 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg4 are the centroids of the S1,C12,C13,C17,C18 and S2,C22,C23,C27,C28 thiophene rings, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| C14—H14 | 0.99 | 2.52 | 3.473 (4) | 160 |
| C15—H15 | 0.99 | 2.59 | 3.489 (3) | 151 |
| C12—H12⋯O2iii | 0.95 | 2.43 | 3.370 (4) | 168 |
| C13—H13⋯O2iv | 0.95 | 2.65 | 3.275 (4) | 124 |
| C23—H23⋯O1v | 0.95 | 2.62 | 3.425 (4) | 143 |
| C24—H24 | 0.99 | 2.52 | 3.480 (4) | 164 |
| C25—H25 | 0.99 | 2.71 | 3.704 (3) | 180 |
| C25—H25 | 0.99 | 2.79 | 3.561 (3) | 135 |
| C15—H15 | 0.99 | 2.84 | 3.571 (3) | 131 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .