| Literature DB >> 22346850 |
Marwa Adib, Meher El Glaoui, Pedro Sidonio Pereira da Silva, Manuela Ramos Silva, Cherif Ben Nasr.
Abstract
In the title compound, {(C(5)H(14)N(2))[Cd(2)Cl(6)]·H(2)O}(n), the asymmetric unit contains one piperazinediium cation, one [Cd(2)Cl(6)](2-) anion and a water mol-ecule. The coordination geometries of the two Cd(2+) cations are distorted octa-hedral. Adjacent Cd(II) atoms are inter-connected alternately by paired chloride bridges, generating polymeric chains parallel to [010]. Neighbouring chains are connected by O-H⋯Cl hydrogen bonds involving the water mol-ecules, forming layers at z = n/2. The crystal packing is further stabilized by inter-molecular N-H⋯Cl and N-H⋯O hydrogen bonds, one of which is bifurcated.Entities:
Year: 2012 PMID: 22346850 PMCID: PMC3274903 DOI: 10.1107/S1600536812001626
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C5H14N2)[Cd2Cl6]·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 8164 reflections |
| θ = 2.7–28.0° | |
| µ = 3.80 mm−1 | |
| β = 120.521 (1)° | Block, colourless |
| 0.40 × 0.27 × 0.16 mm | |
| Bruker APEXII CCD area-detector diffractometer | 3688 independent reflections |
| Radiation source: fine-focus sealed tube | 3449 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.0°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 22206 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3688 reflections | (Δ/σ)max = 0.001 |
| 154 parameters | Δρmax = 0.48 e Å−3 |
| 0 restraints | Δρmin = −0.73 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cd1 | 0.676903 (13) | 0.40204 (2) | 0.082720 (7) | 0.02594 (5) | |
| Cd2 | 0.646100 (13) | 0.89968 (2) | −0.019721 (7) | 0.02546 (5) | |
| Cl1 | 0.80264 (5) | 0.07606 (7) | 0.09737 (2) | 0.02919 (10) | |
| Cl2 | 0.54286 (4) | 0.25219 (7) | 0.13506 (2) | 0.02547 (9) | |
| Cl3 | 0.82700 (4) | 0.53623 (8) | 0.20479 (3) | 0.03199 (10) | |
| Cl4 | 0.77287 (5) | 0.57158 (7) | 0.01573 (3) | 0.02863 (10) | |
| Cl5 | 0.48547 (4) | 0.24642 (7) | −0.04173 (2) | 0.02682 (10) | |
| Cl6 | 0.74505 (5) | 1.02346 (7) | −0.09068 (3) | 0.03096 (10) | |
| N1 | 0.76370 (15) | −0.0550 (2) | 0.23986 (8) | 0.0255 (3) | |
| H1A | 0.7654 | −0.1453 | 0.2097 | 0.031* | |
| H1B | 0.7095 | 0.0407 | 0.2127 | 0.031* | |
| N4 | 0.85051 (16) | 0.0786 (2) | 0.38410 (8) | 0.0302 (4) | |
| H4A | 0.8507 | 0.1670 | 0.4153 | 0.036* | |
| H4B | 0.9034 | −0.0199 | 0.4100 | 0.036* | |
| C2 | 0.71565 (17) | −0.1493 (3) | 0.28474 (9) | 0.0236 (4) | |
| H2 | 0.7724 | −0.2584 | 0.3119 | 0.028* | |
| C3 | 0.71971 (18) | 0.0001 (3) | 0.33791 (10) | 0.0282 (4) | |
| H3A | 0.6620 | 0.1072 | 0.3117 | 0.034* | |
| H3B | 0.6914 | −0.0607 | 0.3682 | 0.034* | |
| C5 | 0.8968 (2) | 0.1733 (3) | 0.33924 (11) | 0.0343 (4) | |
| H5A | 0.9834 | 0.2194 | 0.3702 | 0.041* | |
| H5B | 0.8438 | 0.2859 | 0.3143 | 0.041* | |
| C6 | 0.89316 (18) | 0.0298 (3) | 0.28479 (11) | 0.0320 (4) | |
| H6A | 0.9178 | 0.0961 | 0.2538 | 0.038* | |
| H6B | 0.9537 | −0.0750 | 0.3099 | 0.038* | |
| C7 | 0.58312 (19) | −0.2299 (3) | 0.23657 (11) | 0.0341 (4) | |
| H7A | 0.5273 | −0.1255 | 0.2079 | 0.051* | |
| H7B | 0.5525 | −0.2864 | 0.2659 | 0.051* | |
| H7C | 0.5853 | −0.3288 | 0.2053 | 0.051* | |
| O1W | 0.00855 (17) | 0.2486 (3) | 0.04060 (10) | 0.0431 (4) | |
| H1W | 0.063 (4) | 0.162 (6) | 0.0509 (19) | 0.090 (13)* | |
| H2W | −0.046 (3) | 0.197 (5) | 0.0481 (18) | 0.080 (11)* |
| Cd1 | 0.02794 (8) | 0.02668 (8) | 0.02527 (8) | −0.00503 (5) | 0.01503 (6) | −0.00082 (5) |
| Cd2 | 0.02605 (8) | 0.02669 (8) | 0.02454 (8) | −0.00547 (5) | 0.01350 (6) | −0.00232 (5) |
| Cl1 | 0.0319 (2) | 0.0269 (2) | 0.0251 (2) | 0.00093 (18) | 0.01181 (19) | −0.00354 (17) |
| Cl2 | 0.0243 (2) | 0.0304 (2) | 0.02289 (19) | −0.00335 (17) | 0.01289 (17) | 0.00013 (17) |
| Cl3 | 0.0277 (2) | 0.0360 (3) | 0.0297 (2) | 0.00006 (19) | 0.01262 (19) | −0.0073 (2) |
| Cl4 | 0.0334 (2) | 0.0273 (2) | 0.0313 (2) | 0.00249 (18) | 0.0209 (2) | 0.00483 (18) |
| Cl5 | 0.0293 (2) | 0.0287 (2) | 0.0237 (2) | −0.00274 (18) | 0.01440 (18) | −0.00028 (17) |
| Cl6 | 0.0367 (2) | 0.0281 (2) | 0.0349 (2) | −0.00504 (19) | 0.0231 (2) | 0.00181 (19) |
| N1 | 0.0279 (8) | 0.0309 (8) | 0.0210 (7) | 0.0022 (6) | 0.0148 (6) | 0.0015 (6) |
| N4 | 0.0374 (9) | 0.0261 (9) | 0.0221 (7) | 0.0039 (7) | 0.0115 (7) | −0.0021 (6) |
| C2 | 0.0262 (9) | 0.0252 (9) | 0.0212 (8) | 0.0008 (7) | 0.0135 (7) | 0.0034 (7) |
| C3 | 0.0312 (10) | 0.0327 (11) | 0.0248 (9) | 0.0028 (8) | 0.0172 (8) | −0.0002 (8) |
| C5 | 0.0325 (10) | 0.0302 (11) | 0.0348 (10) | −0.0052 (9) | 0.0131 (9) | 0.0006 (9) |
| C6 | 0.0248 (9) | 0.0397 (12) | 0.0337 (10) | −0.0003 (8) | 0.0164 (8) | 0.0035 (9) |
| C7 | 0.0307 (10) | 0.0410 (12) | 0.0302 (10) | −0.0071 (9) | 0.0151 (8) | −0.0030 (9) |
| O1W | 0.0328 (9) | 0.0374 (10) | 0.0524 (10) | −0.0048 (7) | 0.0167 (8) | −0.0072 (8) |
| Cd1—Cl3 | 2.4852 (5) | N1—H1B | 0.9000 |
| Cd1—Cl4 | 2.5449 (5) | N4—C5 | 1.488 (3) |
| Cd1—Cl2 | 2.6147 (4) | N4—C3 | 1.485 (2) |
| Cd1—Cl1 | 2.6239 (5) | N4—H4A | 0.9000 |
| Cd1—Cl5 | 2.7148 (4) | N4—H4B | 0.9000 |
| Cd1—Cl5i | 2.9415 (5) | C2—C7 | 1.511 (3) |
| Cd2—Cl6 | 2.5198 (5) | C2—C3 | 1.510 (3) |
| Cd2—Cl1ii | 2.5548 (5) | C2—H2 | 0.9800 |
| Cd2—Cl2i | 2.5905 (4) | C3—H3A | 0.9700 |
| Cd2—Cl4 | 2.6007 (5) | C3—H3B | 0.9700 |
| Cd2—Cl5i | 2.7293 (4) | C5—C6 | 1.506 (3) |
| Cd2—Cl5ii | 2.9483 (5) | C5—H5A | 0.9700 |
| Cl1—Cd2iii | 2.5549 (5) | C5—H5B | 0.9700 |
| Cl2—Cd2i | 2.5904 (4) | C6—H6A | 0.9700 |
| Cl5—Cd2i | 2.7293 (4) | C6—H6B | 0.9700 |
| Cl5—Cd1i | 2.9415 (5) | C7—H7A | 0.9600 |
| Cl5—Cd2iii | 2.9482 (5) | C7—H7B | 0.9600 |
| N1—C6 | 1.486 (2) | C7—H7C | 0.9600 |
| N1—C2 | 1.502 (2) | O1W—H1W | 0.83 (4) |
| N1—H1A | 0.9000 | O1W—H2W | 0.84 (4) |
| Cl3—Cd1—Cl4 | 97.183 (17) | C2—N1—H1A | 109.1 |
| Cl3—Cd1—Cl2 | 88.677 (16) | C6—N1—H1B | 109.1 |
| Cl4—Cd1—Cl2 | 170.588 (16) | C2—N1—H1B | 109.1 |
| Cl3—Cd1—Cl1 | 96.435 (16) | H1A—N1—H1B | 107.8 |
| Cl4—Cd1—Cl1 | 92.478 (16) | C5—N4—C3 | 110.85 (14) |
| Cl2—Cd1—Cl1 | 94.181 (16) | C5—N4—H4A | 109.5 |
| Cl3—Cd1—Cl5 | 170.147 (15) | C3—N4—H4A | 109.5 |
| Cl4—Cd1—Cl5 | 91.920 (15) | C5—N4—H4B | 109.5 |
| Cl2—Cd1—Cl5 | 81.819 (14) | C3—N4—H4B | 109.5 |
| Cl1—Cd1—Cl5 | 86.892 (14) | H4A—N4—H4B | 108.1 |
| Cl3—Cd1—Cl5i | 92.263 (15) | N1—C2—C7 | 110.25 (14) |
| Cl4—Cd1—Cl5i | 83.946 (14) | N1—C2—C3 | 108.81 (15) |
| Cl2—Cd1—Cl5i | 88.486 (14) | C7—C2—C3 | 112.00 (16) |
| Cl1—Cd1—Cl5i | 170.954 (14) | N1—C2—H2 | 108.6 |
| Cl5—Cd1—Cl5i | 84.932 (14) | C7—C2—H2 | 108.6 |
| Cl6—Cd2—Cl1ii | 95.130 (16) | C3—C2—H2 | 108.6 |
| Cl6—Cd2—Cl2i | 91.288 (15) | N4—C3—C2 | 111.02 (15) |
| Cl1ii—Cd2—Cl2i | 170.043 (16) | N4—C3—H3A | 109.4 |
| Cl6—Cd2—Cl4 | 93.917 (16) | C2—C3—H3A | 109.4 |
| Cl1ii—Cd2—Cl4 | 94.589 (16) | N4—C3—H3B | 109.4 |
| Cl2i—Cd2—Cl4 | 92.555 (16) | C2—C3—H3B | 109.4 |
| Cl6—Cd2—Cl5i | 173.207 (15) | H3A—C3—H3B | 108.0 |
| Cl1ii—Cd2—Cl5i | 91.424 (15) | N4—C5—C6 | 110.43 (17) |
| Cl2i—Cd2—Cl5i | 81.980 (14) | N4—C5—H5A | 109.6 |
| Cl4—Cd2—Cl5i | 87.324 (14) | C6—C5—H5A | 109.6 |
| Cl6—Cd2—Cl5ii | 96.792 (15) | N4—C5—H5B | 109.6 |
| Cl1ii—Cd2—Cl5ii | 83.379 (14) | C6—C5—H5B | 109.6 |
| Cl2i—Cd2—Cl5ii | 88.316 (14) | H5A—C5—H5B | 108.1 |
| Cl4—Cd2—Cl5ii | 169.235 (14) | N1—C6—C5 | 111.02 (16) |
| Cl5i—Cd2—Cl5ii | 82.170 (14) | N1—C6—H6A | 109.4 |
| Cd2iii—Cl1—Cd1 | 100.407 (17) | C5—C6—H6A | 109.4 |
| Cd2i—Cl2—Cd1 | 101.062 (15) | N1—C6—H6B | 109.4 |
| Cd1—Cl4—Cd2 | 100.341 (16) | C5—C6—H6B | 109.4 |
| Cd1—Cl5—Cd2i | 95.136 (14) | H6A—C6—H6B | 108.0 |
| Cd1—Cl5—Cd1i | 95.067 (14) | C2—C7—H7A | 109.5 |
| Cd2i—Cl5—Cd1i | 88.267 (13) | C2—C7—H7B | 109.5 |
| Cd1—Cl5—Cd2iii | 89.184 (13) | H7A—C7—H7B | 109.5 |
| Cd2i—Cl5—Cd2iii | 97.829 (14) | C2—C7—H7C | 109.5 |
| Cd1i—Cl5—Cd2iii | 172.243 (17) | H7A—C7—H7C | 109.5 |
| C6—N1—C2 | 112.43 (14) | H7B—C7—H7C | 109.5 |
| C6—N1—H1A | 109.1 | H1W—O1W—H2W | 105 (3) |
| Cl3—Cd1—Cl1—Cd2iii | 173.772 (17) | Cl1—Cd1—Cl5—Cd2i | 95.163 (16) |
| Cl4—Cd1—Cl1—Cd2iii | −88.710 (18) | Cl5i—Cd1—Cl5—Cd2i | −88.711 (14) |
| Cl2—Cd1—Cl1—Cd2iii | 84.634 (17) | Cl4—Cd1—Cl5—Cd1i | −83.748 (15) |
| Cl5—Cd1—Cl1—Cd2iii | 3.079 (16) | Cl2—Cd1—Cl5—Cd1i | 89.194 (14) |
| Cl3—Cd1—Cl2—Cd2i | 176.878 (18) | Cl1—Cd1—Cl5—Cd1i | −176.127 (16) |
| Cl1—Cd1—Cl2—Cd2i | −86.765 (17) | Cl5i—Cd1—Cl5—Cd1i | 0.0 |
| Cl5—Cd1—Cl2—Cd2i | −0.517 (14) | Cl4—Cd1—Cl5—Cd2iii | 89.754 (14) |
| Cl5i—Cd1—Cl2—Cd2i | 84.579 (16) | Cl2—Cd1—Cl5—Cd2iii | −97.304 (14) |
| Cl3—Cd1—Cl4—Cd2 | −88.832 (18) | Cl1—Cd1—Cl5—Cd2iii | −2.625 (14) |
| Cl1—Cd1—Cl4—Cd2 | 174.361 (16) | Cl5i—Cd1—Cl5—Cd2iii | 173.501 (18) |
| Cl5—Cd1—Cl4—Cd2 | 87.391 (17) | C6—N1—C2—C7 | 179.04 (17) |
| Cl5i—Cd1—Cl4—Cd2 | 2.695 (15) | C6—N1—C2—C3 | 55.8 (2) |
| Cl6—Cd2—Cl4—Cd1 | −176.201 (16) | C5—N4—C3—C2 | 59.2 (2) |
| Cl1ii—Cd2—Cl4—Cd1 | 88.323 (18) | N1—C2—C3—N4 | −57.26 (19) |
| Cl2i—Cd2—Cl4—Cd1 | −84.734 (17) | C7—C2—C3—N4 | −179.41 (16) |
| Cl5i—Cd2—Cl4—Cd1 | −2.891 (16) | C3—N4—C5—C6 | −57.2 (2) |
| Cl5ii—Cd2—Cl4—Cd1 | 9.69 (9) | C2—N1—C6—C5 | −55.5 (2) |
| Cl4—Cd1—Cl5—Cd2i | −172.459 (15) | N4—C5—C6—N1 | 55.1 (2) |
| Cl2—Cd1—Cl5—Cd2i | 0.484 (13) |
| H··· | ||||
| N1—H1A···Cl3iii | 0.90 | 2.32 | 3.0819 (17) | 143 |
| N1—H1B···Cl2 | 0.90 | 2.35 | 3.2451 (16) | 171 |
| N4—H4A···Cl6iv | 0.90 | 2.44 | 3.1614 (17) | 138 |
| N4—H4A···O1Wv | 0.90 | 2.45 | 3.131 (2) | 133 |
| N4—H4B···O1Wvi | 0.90 | 1.90 | 2.791 (2) | 171 |
| O1W—H1W···Cl6i | 0.83 (4) | 2.40 (4) | 3.2140 (19) | 166 (3) |
| O1W—H2W···Cl1vii | 0.84 (4) | 2.68 (4) | 3.503 (2) | 168 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.90 | 2.32 | 3.0819 (17) | 143 |
| N1—H1 | 0.90 | 2.35 | 3.2451 (16) | 171 |
| N4—H4 | 0.90 | 2.44 | 3.1614 (17) | 138 |
| N4—H4 | 0.90 | 2.45 | 3.131 (2) | 133 |
| N4—H4 | 0.90 | 1.90 | 2.791 (2) | 171 |
| O1 | 0.83 (4) | 2.40 (4) | 3.2140 (19) | 166 (3) |
| O1 | 0.84 (4) | 2.68 (4) | 3.503 (2) | 168 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .