Literature DB >> 22328898

Eyes wide open: the personal genome project, citizen science and veracity in informed consent.

Misha Angrist1.   

Abstract

I am a close observer of the Personal Genome Project (PGP) and one of the original ten participants. The PGP was originally conceived as a way to test novel DNA sequencing technologies on human samples and to begin to build a database of human genomes and traits. However, its founder, Harvard geneticist George Church, was concerned about the fact that DNA is the ultimate digital identifier - individuals and many of their traits can be identified. Therefore, he believed that promising participants privacy and confidentiality would be impractical and disingenuous. Moreover, deidentification of samples would impoverish both genotypic and phenotypic data. As a result, the PGP has arguably become best known for its unprecedented approach to informed consent. All participants must pass an exam testing their knowledge of genomic science and privacy issues and agree to forgo the privacy and confidentiality of their genomic data and personal health records. Church aims to scale up to 100,000 participants. This special report discusses the impetus for the project, its early history and its potential to have a lasting impact on the treatment of human subjects in biomedical research.

Entities:  

Year:  2009        PMID: 22328898      PMCID: PMC3275804          DOI: 10.2217/pme.09.48

Source DB:  PubMed          Journal:  Per Med        ISSN: 1741-0541            Impact factor:   2.512


  29 in total

1.  How (not) to protect genomic data privacy in a distributed network: using trail re-identification to evaluate and design anonymity protection systems.

Authors:  Bradley Malin; Latanya Sweeney
Journal:  J Biomed Inform       Date:  2004-06       Impact factor: 6.317

Review 2.  Community-based participatory research: assessing the evidence.

Authors:  M Viswanathan; A Ammerman; E Eng; G Garlehner; K N Lohr; D Griffith; S Rhodes; C Samuel-Hodge; S Maty; L Lux; L Webb; S F Sutton; T Swinson; A Jackman; L Whitener
Journal:  Evid Rep Technol Assess (Summ)       Date:  2004-08

3.  Beyond informed consent: the therapeutic misconception and trust.

Authors:  I de Melo-Martín; A Ho
Journal:  J Med Ethics       Date:  2008-03       Impact factor: 2.903

4.  Power of deep, all-exon resequencing for discovery of human trait genes.

Authors:  Gregory V Kryukov; Alexander Shpunt; John A Stamatoyannopoulos; Shamil R Sunyaev
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-06       Impact factor: 11.205

5.  On Jim Watson's APOE status: genetic information is hard to hide.

Authors:  Dale R Nyholt; Chang-En Yu; Peter M Visscher
Journal:  Eur J Hum Genet       Date:  2008-10-22       Impact factor: 4.246

Review 6.  From genetic privacy to open consent.

Authors:  Jeantine E Lunshof; Ruth Chadwick; Daniel B Vorhaus; George M Church
Journal:  Nat Rev Genet       Date:  2008-05       Impact factor: 53.242

Review 7.  Integrating research and action: a systematic review of community-based participatory research to address health disparities in environmental and occupational health in the USA.

Authors:  W K Cook
Journal:  J Epidemiol Community Health       Date:  2008-08       Impact factor: 3.710

8.  Correcting "winner's curse" in odds ratios from genomewide association findings for major complex human diseases.

Authors:  Hua Zhong; Ross L Prentice
Journal:  Genet Epidemiol       Date:  2010-01       Impact factor: 2.135

9.  Identifiability of DNA data: the need for consistent federal policy.

Authors:  Amy L McGuire
Journal:  Am J Bioeth       Date:  2008-10       Impact factor: 11.229

10.  Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.

Authors:  Nils Homer; Szabolcs Szelinger; Margot Redman; David Duggan; Waibhav Tembe; Jill Muehling; John V Pearson; Dietrich A Stephan; Stanley F Nelson; David W Craig
Journal:  PLoS Genet       Date:  2008-08-29       Impact factor: 5.917

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  21 in total

1.  Personal genomics and individual identities: motivations and moral imperatives of early users.

Authors:  Michelle L McGowan; Jennifer R Fishman; Marcie A Lambrix
Journal:  New Genet Soc       Date:  2010-09-01

Review 2.  The Ethics of Big Data: Current and Foreseeable Issues in Biomedical Contexts.

Authors:  Brent Daniel Mittelstadt; Luciano Floridi
Journal:  Sci Eng Ethics       Date:  2015-05-23       Impact factor: 3.525

3.  Personal genomes, participatory genomics and the anonymity-privacy conundrum.

Authors:  Vinod Scaria
Journal:  J Genet       Date:  2014-12       Impact factor: 1.166

4.  Only connect: personal genomics and the future of American medicine.

Authors:  Misha Angrist
Journal:  Mol Diagn Ther       Date:  2010-04-01       Impact factor: 4.074

5.  A guide to the current Web-based resources in pharmacogenomics.

Authors:  Dylan M Glubb; Steven W Paugh; Ron H N van Schaik; Federico Innocenti
Journal:  Methods Mol Biol       Date:  2013

Review 6.  Sharing Data to Build a Medical Information Commons: From Bermuda to the Global Alliance.

Authors:  Robert Cook-Deegan; Rachel A Ankeny; Kathryn Maxson Jones
Journal:  Annu Rev Genomics Hum Genet       Date:  2017-04-17       Impact factor: 8.929

7.  Trust and Expectations of Researchers and Public Health Departments for the Use of HIV Molecular Epidemiology.

Authors:  Cynthia E Schairer; Sanjay R Mehta; Staal A Vinterbo; Martin Hoenigl; Michael Kalichman; Susan J Little
Journal:  AJOB Empir Bioeth       Date:  2019-05-03

Review 8.  Evolving approaches to the ethical management of genomic data.

Authors:  Jean E McEwen; Joy T Boyer; Kathie Y Sun
Journal:  Trends Genet       Date:  2013-02-28       Impact factor: 11.639

9.  Personal genomes in progress: from the human genome project to the personal genome project.

Authors:  Jeantine E Lunshof; Jason Bobe; John Aach; Misha Angrist; Joseph V Thakuria; Daniel B Vorhaus; Margret R Hoehe; George M Church
Journal:  Dialogues Clin Neurosci       Date:  2010       Impact factor: 5.986

10.  Revisiting respect for persons in genomic research.

Authors:  Debra J H Mathews; Leila Jamal
Journal:  Genes (Basel)       Date:  2014-01-22       Impact factor: 4.096

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