Literature DB >> 22305988

Circular representation of human cortical networks for subject and population-level connectomic visualization.

Andrei Irimia1, Micah C Chambers, Carinna M Torgerson, John D Van Horn.   

Abstract

Cortical network architecture has predominantly been investigated visually using graph theory representations. In the context of human connectomics, such representations are not however always satisfactory because canonical methods for vertex-edge relationship representation do not always offer optimal insight regarding functional and structural neural connectivity. This article introduces an innovative framework for the depiction of human connectomics by employing a circular visualization method which is highly suitable to the exploration of central nervous system architecture. This type of representation, which we name a 'connectogram', has the capability of classifying neuroconnectivity relationships intuitively and elegantly. A multimodal protocol for MRI/DTI neuroimaging data acquisition is here combined with automatic image segmentation to (1) extract cortical and non-cortical anatomical structures, (2) calculate associated volumetrics and morphometrics, and (3) determine patient-specific connectivity profiles to generate subject-level and population-level connectograms. The scalability of our approach is demonstrated for a population of 50 adults. Two essential advantages of the connectogram are (1) the enormous potential for mapping and analyzing the human connectome, and (2) the unconstrained ability to expand and extend this analysis framework to the investigation of clinical populations and animal models. Published by Elsevier Inc.

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Year:  2012        PMID: 22305988      PMCID: PMC3594415          DOI: 10.1016/j.neuroimage.2012.01.107

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  38 in total

1.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Neuron       Date:  2002-01-31       Impact factor: 17.173

Review 2.  Exploring the brain network: a review on resting-state fMRI functional connectivity.

Authors:  Martijn P van den Heuvel; Hilleke E Hulshoff Pol
Journal:  Eur Neuropsychopharmacol       Date:  2010-05-14       Impact factor: 4.600

3.  Network architecture of the long-distance pathways in the macaque brain.

Authors:  Dharmendra S Modha; Raghavendra Singh
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-13       Impact factor: 11.205

4.  Statistical parametric network analysis of functional connectivity dynamics during a working memory task.

Authors:  Cedric E Ginestet; Andrew Simmons
Journal:  Neuroimage       Date:  2010-11-21       Impact factor: 6.556

5.  Mixture models and exploratory analysis in networks.

Authors:  M E J Newman; E A Leicht
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-24       Impact factor: 11.205

6.  Circos: an information aesthetic for comparative genomics.

Authors:  Martin Krzywinski; Jacqueline Schein; Inanç Birol; Joseph Connors; Randy Gascoyne; Doug Horsman; Steven J Jones; Marco A Marra
Journal:  Genome Res       Date:  2009-06-18       Impact factor: 9.043

7.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

8.  Graphical summary of patient status.

Authors:  S M Powsner; E R Tufte
Journal:  Lancet       Date:  1994-08-06       Impact factor: 79.321

9.  Alteration of cortical functional connectivity as a result of traumatic brain injury revealed by graph theory, ICA, and sLORETA analyses of EEG signals.

Authors:  C Cao; S Slobounov
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2009-07-17       Impact factor: 3.802

10.  Neuroimaging study designs, computational analyses and data provenance using the LONI pipeline.

Authors:  Ivo Dinov; Kamen Lozev; Petros Petrosyan; Zhizhong Liu; Paul Eggert; Jonathan Pierce; Alen Zamanyan; Shruthi Chakrapani; John Van Horn; D Stott Parker; Rico Magsipoc; Kelvin Leung; Boris Gutman; Roger Woods; Arthur Toga
Journal:  PLoS One       Date:  2010-09-28       Impact factor: 3.240

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  67 in total

Review 1.  Evolution of the Human Nervous System Function, Structure, and Development.

Authors:  André M M Sousa; Kyle A Meyer; Gabriel Santpere; Forrest O Gulden; Nenad Sestan
Journal:  Cell       Date:  2017-07-13       Impact factor: 41.582

2.  The DTI connectivity of the human claustrum.

Authors:  Carinna M Torgerson; Andrei Irimia; S Y Matthew Goh; John Darrell Van Horn
Journal:  Hum Brain Mapp       Date:  2014-10-23       Impact factor: 5.038

3.  An Uncertainty Visual Analytics Framework for fMRI Functional Connectivity.

Authors:  Michael de Ridder; Karsten Klein; Jean Yang; Pengyi Yang; Jim Lagopoulos; Ian Hickie; Max Bennett; Jinman Kim
Journal:  Neuroinformatics       Date:  2019-04

4.  BRANT: A Versatile and Extendable Resting-State fMRI Toolkit.

Authors:  Kaibin Xu; Yong Liu; Yafeng Zhan; Jiaji Ren; Tianzi Jiang
Journal:  Front Neuroinform       Date:  2018-09-03       Impact factor: 4.081

5.  Disconnection of the ascending arousal system in traumatic coma.

Authors:  Brian L Edlow; Robin L Haynes; Emi Takahashi; Joshua P Klein; Peter Cummings; Thomas Benner; David M Greer; Steven M Greenberg; Ona Wu; Hannah C Kinney; Rebecca D Folkerth
Journal:  J Neuropathol Exp Neurol       Date:  2013-06       Impact factor: 3.685

6.  Brain Structure and Response to Emotional Stimuli as Related to Gut Microbial Profiles in Healthy Women.

Authors:  Kirsten Tillisch; Emeran A Mayer; Arpana Gupta; Zafar Gill; Rémi Brazeilles; Boris Le Nevé; Johan E T van Hylckama Vlieg; Denis Guyonnet; Muriel Derrien; Jennifer S Labus
Journal:  Psychosom Med       Date:  2017-10       Impact factor: 4.312

Review 7.  Structural and connectomic neuroimaging for the personalized study of longitudinal alterations in cortical shape, thickness and connectivity after traumatic brain injury.

Authors:  A Irimia; S Y Goh; C M Torgerson; P Vespa; J D Van Horn
Journal:  J Neurosurg Sci       Date:  2014-05-20       Impact factor: 2.279

8.  Cognitive phenotypes in parkinson's disease differ in terms of brain-network organization and connectivity.

Authors:  Renaud Lopes; Christine Delmaire; Luc Defebvre; Anja J Moonen; Annelien A Duits; Paul Hofman; Albert F G Leentjens; Kathy Dujardin
Journal:  Hum Brain Mapp       Date:  2016-11-17       Impact factor: 5.038

9.  Sigmund Freud-early network theories of the brain.

Authors:  Werner Surbeck; Tim Killeen; Johannes Vetter; Gerhard Hildebrandt
Journal:  Acta Neurochir (Wien)       Date:  2018-03-27       Impact factor: 2.216

10.  A Distinct Brain-Gut-Microbiome Profile Exists for Females with Obesity and Food Addiction.

Authors:  Tien S Dong; Emeran A Mayer; Vadim Osadchiy; Candace Chang; William Katzka; Venu Lagishetty; Kimberly Gonzalez; Amir Kalani; Jean Stains; Jonathan P Jacobs; Valter D Longo; Arpana Gupta
Journal:  Obesity (Silver Spring)       Date:  2020-08       Impact factor: 5.002

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