Literature DB >> 22305165

Transcriptional switches direct plant organ formation and patterning.

Miguel A Moreno-Risueno1, Jaimie M Van Norman, Philip N Benfey.   

Abstract

Development of multicellular organisms requires specification of diverse cell types. In plants, development is continuous and because plant cells are surrounded by rigid cell walls, cell division and specification of daughter cell fate must be carefully orchestrated. During embryonic and postembryonic plant development, the specification of cell types is determined both by positional cues and cell lineage. The establishment of distinct transcriptional domains is a fundamental mechanism for determining different cell fates. In this review, we focus on four examples from recent literature of switches operating in cell fate decisions that are regulated by transcriptional mechanisms. First, we highlight a transcriptional mechanism involving a mobile transcription factor in formation of the two ground tissue cell types in roots. Specification of vascular cell types is then discussed, including new details about xylem cell-type specification via a mobile microRNA. Next, transcriptional regulation of two key embryonic developmental events is considered: establishment of apical-basal polarity in the single-celled zygote and specification of distinct root and shoot stem cell populations in the plant embryo. Finally, a dynamic transcriptional mechanism for lateral organ positioning that integrates spatial and temporal information into a repeating pattern is summarized.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22305165      PMCID: PMC3870140          DOI: 10.1016/B978-0-12-386499-4.00009-4

Source DB:  PubMed          Journal:  Curr Top Dev Biol        ISSN: 0070-2153            Impact factor:   4.897


  69 in total

1.  Fertilization in Arabidopsis thaliana wild type: developmental stages and time course.

Authors:  Jean-Emmanuel Faure; Nicolas Rotman; Philippe Fortuné; Christian Dumas
Journal:  Plant J       Date:  2002-05       Impact factor: 6.417

2.  A MAPKK kinase gene regulates extra-embryonic cell fate in Arabidopsis.

Authors:  Wolfgang Lukowitz; Adrienne Roeder; Dana Parmenter; Chris Somerville
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

Review 3.  Promoter bashing, microRNAs, and Knox genes. New insights, regulators, and targets-of-regulation in the establishment of lateral organ polarity in Arabidopsis.

Authors:  Eric M Engstrom; Anat Izhaki; John L Bowman
Journal:  Plant Physiol       Date:  2004-06       Impact factor: 8.340

Review 4.  Establishment and maintenance of vascular cell communities through local signaling.

Authors:  Yuki Hirakawa; Yuki Kondo; Hiroo Fukuda
Journal:  Curr Opin Plant Biol       Date:  2010-10-08       Impact factor: 7.834

Review 5.  Transcriptional regulation of vascular cell fates.

Authors:  Kyoko Ohashi-Ito; Hiroo Fukuda
Journal:  Curr Opin Plant Biol       Date:  2010-09-23       Impact factor: 7.834

Review 6.  Dynamic integration of auxin transport and signalling.

Authors:  Ottoline Leyser
Journal:  Curr Biol       Date:  2006-06-06       Impact factor: 10.834

7.  Developmental patterning by mechanical signals in Arabidopsis.

Authors:  Olivier Hamant; Marcus G Heisler; Henrik Jönsson; Pawel Krupinski; Magalie Uyttewaal; Plamen Bokov; Francis Corson; Patrik Sahlin; Arezki Boudaoud; Elliot M Meyerowitz; Yves Couder; Jan Traas
Journal:  Science       Date:  2008-12-12       Impact factor: 47.728

8.  Non-cell-autonomous microRNA165 acts in a dose-dependent manner to regulate multiple differentiation status in the Arabidopsis root.

Authors:  Shunsuke Miyashima; Satoshi Koi; Takashi Hashimoto; Keiji Nakajima
Journal:  Development       Date:  2011-06       Impact factor: 6.868

9.  The GRAS gene family in Arabidopsis: sequence characterization and basic expression analysis of the SCARECROW-LIKE genes.

Authors:  L D Pysh; J W Wysocka-Diller; C Camilleri; D Bouchez; P N Benfey
Journal:  Plant J       Date:  1999-04       Impact factor: 6.417

10.  Sharp developmental thresholds defined through bistability by antagonistic gradients of retinoic acid and FGF signaling.

Authors:  Albert Goldbeter; Didier Gonze; Olivier Pourquié
Journal:  Dev Dyn       Date:  2007-06       Impact factor: 3.780

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  10 in total

1.  Reconstruction of protein networks from an atlas of maize seed proteotypes.

Authors:  Justin W Walley; Zhouxin Shen; Ryan Sartor; Kevin J Wu; Joshua Osborn; Laurie G Smith; Steven P Briggs
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

2.  Morphogenic Regulators and Their Application in Improving Plant Transformation.

Authors:  Samson Nalapalli; Meral Tunc-Ozdemir; Yuejin Sun; Sivamani Elumalai; Qiudeng Que
Journal:  Methods Mol Biol       Date:  2021

3.  Nuclear trapping controls the position-dependent localization of CAPRICE in the root epidermis of Arabidopsis.

Authors:  Yeon Hee Kang; Sang-Kee Song; John Schiefelbein; Myeong Min Lee
Journal:  Plant Physiol       Date:  2013-07-05       Impact factor: 8.340

Review 4.  Emerging tools, concepts and ideas to track the modulator genes underlying plant drought adaptive traits: An overview.

Authors:  Parvathi Ms; Karaba N Nataraja
Journal:  Plant Signal Behav       Date:  2016

Review 5.  microRNA biogenesis, degradation and activity in plants.

Authors:  Meng Xie; Shuxin Zhang; Bin Yu
Journal:  Cell Mol Life Sci       Date:  2014-09-11       Impact factor: 9.261

Review 6.  Post-embryonic organogenesis and plant regeneration from tissues: two sides of the same coin?

Authors:  Juan Perianez-Rodriguez; Concepcion Manzano; Miguel A Moreno-Risueno
Journal:  Front Plant Sci       Date:  2014-05-26       Impact factor: 5.753

7.  The DOF Transcription Factor SlDOF10 Regulates Vascular Tissue Formation During Ovary Development in Tomato.

Authors:  Pilar Rojas-Gracia; Edelín Roque; Mónica Medina; María Jesús López-Martín; Luis A Cañas; José Pío Beltrán; Concepción Gómez-Mena
Journal:  Front Plant Sci       Date:  2019-02-26       Impact factor: 5.753

8.  Differential Expression of MicroRNAs During Root Formation in Taxus Chinensis Var. mairei Cultivars.

Authors:  Yongjun Fei; Caroline Luo; Wei Tang
Journal:  Open Life Sci       Date:  2019-04-06       Impact factor: 0.938

9.  TreeTFDB: an integrative database of the transcription factors from six economically important tree crops for functional predictions and comparative and functional genomics.

Authors:  Keiichi Mochida; Takuhiro Yoshida; Tetsuya Sakurai; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki; Lam-Son Phan Tran
Journal:  DNA Res       Date:  2013-01-02       Impact factor: 4.458

10.  Root apex transition zone as oscillatory zone.

Authors:  František Baluška; Stefano Mancuso
Journal:  Front Plant Sci       Date:  2013-10-02       Impact factor: 5.753

  10 in total

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