Literature DB >> 22302573

Gencrypt: one-way cryptographic hashes to detect overlapping individuals across samples.

Michael C Turchin1, Joel N Hirschhorn.   

Abstract

Meta-analysis across genome-wide association studies is a common approach for discovering genetic associations. However, in some meta-analysis efforts, individual-level data cannot be broadly shared by study investigators due to privacy and Institutional Review Board concerns. In such cases, researchers cannot confirm that each study represents a unique group of people, leading to potentially inflated test statistics and false positives. To resolve this problem, we created a software tool, Gencrypt, which utilizes a security protocol known as one-way cryptographic hashes to allow overlapping participants to be identified without sharing individual-level data.

Entities:  

Mesh:

Year:  2012        PMID: 22302573      PMCID: PMC3307118          DOI: 10.1093/bioinformatics/bts045

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  6 in total

1.  The importance of genealogy in determining genetic associations with complex traits.

Authors:  D L Newman; M Abney; M S McPeek; C Ober; N J Cox
Journal:  Am J Hum Genet       Date:  2001-11       Impact factor: 11.025

2.  Genome-wide association of anthropometric traits in African- and African-derived populations.

Authors:  Sun J Kang; Charleston W K Chiang; Cameron D Palmer; Bamidele O Tayo; Guillaume Lettre; Johannah L Butler; Rachel Hackett; Adebowale A Adeyemo; Candace Guiducci; Ilze Berzins; Thutrang T Nguyen; Tao Feng; Amy Luke; Daniel Shriner; Kristin Ardlie; Charles Rotimi; Rainford Wilks; Terrence Forrester; Colin A McKenzie; Helen N Lyon; Richard S Cooper; Xiaofeng Zhu; Joel N Hirschhorn
Journal:  Hum Mol Genet       Date:  2010-04-16       Impact factor: 6.150

3.  PLINK: a tool set for whole-genome association and population-based linkage analyses.

Authors:  Shaun Purcell; Benjamin Neale; Kathe Todd-Brown; Lori Thomas; Manuel A R Ferreira; David Bender; Julian Maller; Pamela Sklar; Paul I W de Bakker; Mark J Daly; Pak C Sham
Journal:  Am J Hum Genet       Date:  2007-07-25       Impact factor: 11.025

4.  Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.

Authors:  Lucia A Hindorff; Praveen Sethupathy; Heather A Junkins; Erin M Ramos; Jayashri P Mehta; Francis S Collins; Teri A Manolio
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-27       Impact factor: 11.205

5.  Meta-analysis of genome-wide association studies with overlapping subjects.

Authors:  Dan-Yu Lin; Patrick F Sullivan
Journal:  Am J Hum Genet       Date:  2009-12       Impact factor: 11.025

6.  Genetics of Kidneys in Diabetes (GoKinD) study: a genetics collection available for identifying genetic susceptibility factors for diabetic nephropathy in type 1 diabetes.

Authors:  Patricia W Mueller; John J Rogus; Patricia A Cleary; Yuan Zhao; Adam M Smiles; Michael W Steffes; Jean Bucksa; Therese B Gibson; Suzanne K Cordovado; Andrzej S Krolewski; Concepcion R Nierras; James H Warram
Journal:  J Am Soc Nephrol       Date:  2006-06-14       Impact factor: 10.121

  6 in total
  3 in total

1.  A correlated meta-analysis strategy for data mining "OMIC" scans.

Authors:  Michael A Province; Ingrid B Borecki
Journal:  Pac Symp Biocomput       Date:  2013

2.  Privacy in the Genomic Era.

Authors:  Muhammad Naveed; Erman Ayday; Ellen W Clayton; Jacques Fellay; Carl A Gunter; Jean-Pierre Hubaux; Bradley A Malin; Xiaofeng Wang
Journal:  ACM Comput Surv       Date:  2015-09       Impact factor: 10.282

3.  Across-cohort QC analyses of GWAS summary statistics from complex traits.

Authors:  Guo-Bo Chen; Sang Hong Lee; Matthew R Robinson; Maciej Trzaskowski; Zhi-Xiang Zhu; Thomas W Winkler; Felix R Day; Damien C Croteau-Chonka; Andrew R Wood; Adam E Locke; Zoltán Kutalik; Ruth J F Loos; Timothy M Frayling; Joel N Hirschhorn; Jian Yang; Naomi R Wray; Peter M Visscher
Journal:  Eur J Hum Genet       Date:  2016-08-24       Impact factor: 4.246

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.