Literature DB >> 22301156

Overreliance on the hexon gene, leading to misclassification of human adenoviruses.

Gurdeep Singh1, Christopher M Robinson, Shoaleh Dehghan, Timothy Schmidt, Donald Seto, Morris S Jones, David W Dyer, James Chodosh.   

Abstract

The genome of human adenovirus (HAdV) D30 was sequenced in depth. Sequence assembly and analysis revealed two distinct viral sequences with identical hexon genes, which were the same as the one previously reported for HAdV-D30. However, one of the two viruses was found to be a recombinant of HAdV-D29. Exclusive reliance on serum neutralization can lead to mischaracterization of adenoviruses and miss coinfections. Whole-genome sequencing remains the gold standard for proper classification of HAdVs.

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Year:  2012        PMID： 22301156      PMCID： PMC3318657          DOI： 10.1128/JVI.06969-11

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  30 in total

1.  Adenovirus serotype 30 fiber does not mediate transduction via the coxsackie-adenovirus receptor.

Authors:  Lane K Law; Beverly L Davidson
Journal:  J Virol       Date:  2002-01       Impact factor: 5.103

2.  Phylogenetic analysis of the main neutralization and hemagglutination determinants of all human adenovirus prototypes as a basis for molecular classification and taxonomy.

Authors:  Ijad Madisch; Gabi Harste; Heidi Pommer; Albert Heim
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

3.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Authors:  Koichiro Tamura; Joel Dudley; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

4.  Evidence of frequent recombination among human adenoviruses.

Authors:  Alexander N Lukashev; Olga E Ivanova; Tatiana P Eremeeva; Richard D Iggo
Journal:  J Gen Virol       Date:  2008-02       Impact factor: 3.891

Review 5.  The evolution of the adenoviral genome.

Authors:  J Sambrook; M Sleigh; J A Engler; T R Broker
Journal:  Ann N Y Acad Sci       Date:  1980       Impact factor: 5.691

6.  An epidemic of keratoconjunctivitis due to adenovirus type 37.

Authors:  S P Harding; K J Mutton; H van der Avoort; A G Wermenbol
Journal:  Eye (Lond)       Date:  1988       Impact factor: 3.775

7.  Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination.

Authors:  K S Lole; R C Bollinger; R S Paranjape; D Gadkari; S S Kulkarni; N G Novak; R Ingersoll; H W Sheppard; S C Ray
Journal:  J Virol       Date:  1999-01       Impact factor: 5.103

8.  Analysis of 15 adenovirus hexon proteins reveals the location and structure of seven hypervariable regions containing serotype-specific residues.

Authors:  L Crawford-Miksza; D P Schnurr
Journal:  J Virol       Date:  1996-03       Impact factor: 5.103

9.  Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome.

Authors:  Vasily Tcherepanov; Angelika Ehlers; Chris Upton
Journal:  BMC Genomics       Date:  2006-06-13       Impact factor: 3.969

10.  Genomic and bioinformatics analysis of human adenovirus type 37: new insights into corneal tropism.

Authors:  Christopher M Robinson; Fatemeh Shariati; Allison F Gillaspy; David W Dyer; James Chodosh
Journal:  BMC Genomics       Date:  2008-05-09       Impact factor: 3.969
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  28 in total

Review 1.  Genomic foundations of evolution and ocular pathogenesis in human adenovirus species D.

Authors:  Ashrafali Mohamed Ismail; Xiaohong Zhou; David W Dyer; Donald Seto; Jaya Rajaiya; James Chodosh
Journal:  FEBS Lett       Date:  2019-12-11       Impact factor: 4.124

2.  Genomic stability of adipogenic human adenovirus 36.

Authors:  J-H Nam; H-N Na; R L Atkinson; N V Dhurandhar
Journal:  Int J Obes (Lond)       Date:  2013-05-06       Impact factor: 5.095

3.  Homologous recombination in E3 genes of human adenovirus species D.

Authors:  Gurdeep Singh; Christopher M Robinson; Shoaleh Dehghan; Morris S Jones; David W Dyer; Donald Seto; James Chodosh
Journal:  J Virol       Date:  2013-09-11       Impact factor: 5.103

4.  Simian adenovirus type 35 has a recombinant genome comprising human and simian adenovirus sequences, which predicts its potential emergence as a human respiratory pathogen.

Authors:  Shoaleh Dehghan; Jason Seto; Morris S Jones; David W Dyer; James Chodosh; Donald Seto
Journal:  Virology       Date:  2013-10-08       Impact factor: 3.616

5.  Genome sequence of the first human adenovirus type 14 isolated in China.

Authors:  Qiwei Zhang; Donald Seto; Suhui Zhao; Li Zhu; Wei Zhao; Chengsong Wan
Journal:  J Virol       Date:  2012-06       Impact factor: 5.103

6.  Analysis of human adenovirus type 19 associated with epidemic keratoconjunctivitis and its reclassification as adenovirus type 64.

Authors:  Xiaohong Zhou; Christopher M Robinson; Jaya Rajaiya; Shoaleh Dehghan; Donald Seto; Morris S Jones; David W Dyer; James Chodosh
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-05-14       Impact factor: 4.799

7.  Genomics-based re-examination of the taxonomy and phylogeny of human and simian Mastadenoviruses: an evolving whole genomes approach, revealing putative zoonosis, anthroponosis, and amphizoonosis.

Authors:  June Kang; Ashrafali Mohamed Ismail; Shoaleh Dehghan; Jaya Rajaiya; Marc W Allard; Haw Chuan Lim; David W Dyer; James Chodosh; Donald Seto
Journal:  Cladistics       Date:  2020-07-14       Impact factor: 5.254

8.  Recombination of the epsilon determinant and corneal tropism: Human adenovirus species D types 15, 29, 56, and 69.

Authors:  Gurdeep Singh; Xiaohong Zhou; Jeong Yoon Lee; Mohammad A Yousuf; Mirja Ramke; Ashrafali M Ismail; Ji Sun Lee; Christopher M Robinson; Donald Seto; David W Dyer; Morris S Jones; Jaya Rajaiya; James Chodosh
Journal:  Virology       Date:  2015-09-07       Impact factor: 3.616

9.  Genome sequence of human adenovirus type 55, a re-emergent acute respiratory disease pathogen in China.

Authors:  Qiwei Zhang; Donald Seto; Bin Cao; Suhui Zhao; Chengsong Wan
Journal:  J Virol       Date:  2012-11       Impact factor: 5.103

10.  Selection Pressure in the Human Adenovirus Fiber Knob Drives Cell Specificity in Epidemic Keratoconjunctivitis.

Authors:  Ashrafali M Ismail; Ji Sun Lee; David W Dyer; Donald Seto; Jaya Rajaiya; James Chodosh
Journal:  J Virol       Date:  2016-10-14       Impact factor: 5.103
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