Literature DB >> 22300851

Extremely long-lived nuclear pore proteins in the rat brain.

Jeffrey N Savas1, Brandon H Toyama, Tao Xu, John R Yates, Martin W Hetzer.   

Abstract

To combat the functional decline of the proteome, cells use the process of protein turnover to replace potentially impaired polypeptides with new functional copies. We found that extremely long-lived proteins (ELLPs) did not turn over in postmitotic cells of the rat central nervous system. These ELLPs were associated with chromatin and the nuclear pore complex, the central transport channels that mediate all molecular trafficking in and out of the nucleus. The longevity of these proteins would be expected to expose them to potentially harmful metabolites, putting them at risk of accumulating damage over extended periods of time. Thus, it is possible that failure to maintain proper levels and functional integrity of ELLPs in nonproliferative cells might contribute to age-related deterioration in cell and tissue function.

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Year:  2012        PMID: 22300851      PMCID: PMC3296478          DOI: 10.1126/science.1217421

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  19 in total

1.  Measurement of the isotope enrichment of stable isotope-labeled proteins using high-resolution mass spectra of peptides.

Authors:  Michael J MacCoss; Christine C Wu; Dwight E Matthews; John R Yates
Journal:  Anal Chem       Date:  2005-12-01       Impact factor: 6.986

2.  Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome.

Authors:  Junmin Peng; Joshua E Elias; Carson C Thoreen; Larry J Licklider; Steven P Gygi
Journal:  J Proteome Res       Date:  2003 Jan-Feb       Impact factor: 4.466

3.  Retrospective birth dating of cells in humans.

Authors:  Kirsty L Spalding; Ratan D Bhardwaj; Bruce A Buchholz; Henrik Druid; Jonas Frisén
Journal:  Cell       Date:  2005-07-15       Impact factor: 41.582

4.  Systems-wide proteomic analysis in mammalian cells reveals conserved, functional protein turnover.

Authors:  Sidney B Cambridge; Florian Gnad; Chuong Nguyen; Justo Lorenzo Bermejo; Marcus Krüger; Matthias Mann
Journal:  J Proteome Res       Date:  2011-11-03       Impact factor: 4.466

5.  Histone turnover within nonproliferating cells.

Authors:  S L Commerford; A L Carsten; E P Cronkite
Journal:  Proc Natl Acad Sci U S A       Date:  1982-02       Impact factor: 11.205

6.  Nuclei from rat liver: isolation method that combines purity with high yield.

Authors:  G Blobel; V R Potter
Journal:  Science       Date:  1966-12-30       Impact factor: 47.728

7.  Direct analysis of protein complexes using mass spectrometry.

Authors:  A J Link; J Eng; D M Schieltz; E Carmack; G J Mize; D R Morris; B M Garvik; J R Yates
Journal:  Nat Biotechnol       Date:  1999-07       Impact factor: 54.908

Review 8.  Nuclear pore complexes: guardians of the nuclear genome.

Authors:  M Capelson; C Doucet; M W Hetzer
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2011-04-18

9.  Turnover of myelin proteins of rat brain, determined in fractions separated by sedimentation in a continuous sucrose gradient.

Authors:  R Shapira; M R Wilhelmi; R F Kibler
Journal:  J Neurochem       Date:  1981-04       Impact factor: 5.372

10.  Age-dependent deterioration of nuclear pore complexes causes a loss of nuclear integrity in postmitotic cells.

Authors:  Maximiliano A D'Angelo; Marcela Raices; Siler H Panowski; Martin W Hetzer
Journal:  Cell       Date:  2009-01-23       Impact factor: 41.582

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  145 in total

1.  Gating neural development and aging via nuclear pores.

Authors:  Guang-Hui Liu; Mo Li; Jing Qu; Juan Carlos Izpisua Belmonte
Journal:  Cell Res       Date:  2012-03-13       Impact factor: 25.617

2.  Identification of long-lived proteins reveals exceptional stability of essential cellular structures.

Authors:  Brandon H Toyama; Jeffrey N Savas; Sung Kyu Park; Michael S Harris; Nicholas T Ingolia; John R Yates; Martin W Hetzer
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

3.  Very long-term memories may be stored in the pattern of holes in the perineuronal net.

Authors:  Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-05       Impact factor: 11.205

Review 4.  Functional insights from studies on the structure of the nuclear pore and coat protein complexes.

Authors:  Thomas Schwartz
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-07-01       Impact factor: 10.005

5.  Tracking brain palmitoylation change: predominance of glial change in a mouse model of Huntington's disease.

Authors:  Junmei Wan; Jeffrey N Savas; Amy F Roth; Shaun S Sanders; Roshni R Singaraja; Michael R Hayden; John R Yates; Nicholas G Davis
Journal:  Chem Biol       Date:  2013-11-07

Review 6.  Protein homeostasis: live long, won't prosper.

Authors:  Brandon H Toyama; Martin W Hetzer
Journal:  Nat Rev Mol Cell Biol       Date:  2013-01       Impact factor: 94.444

7.  Structural and functional studies of the 252 kDa nucleoporin ELYS reveal distinct roles for its three tethered domains.

Authors:  Silvija Bilokapic; Thomas U Schwartz
Journal:  Structure       Date:  2013-03-14       Impact factor: 5.006

Review 8.  Uncovering nuclear pore complexity with innovation.

Authors:  Rebecca L Adams; Susan R Wente
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

9.  Remodeling of the H3 nucleosomal landscape during mouse aging.

Authors:  Yilin Chen; Juan I Bravo; Jyung Mean Son; Changhan Lee; Bérénice A Benayoun
Journal:  Transl Med Aging       Date:  2020-01-03

10.  The role of Nup98 in transcription regulation in healthy and diseased cells.

Authors:  Tobias M Franks; Martin W Hetzer
Journal:  Trends Cell Biol       Date:  2012-12-13       Impact factor: 20.808

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