Literature DB >> 22300815

Non-coding RNAs: key regulators of mammalian transcription.

Jennifer F Kugel1, James A Goodrich.   

Abstract

Non-coding RNAs (ncRNAs) are now recognized as active participants in controlling many biological processes. Indeed, these products of transcription can even control the process of transcription itself. In the past several years, ncRNAs have been found to regulate transcription of single genes, as well as entire transcriptional programs, affecting the expression of hundreds to thousands of genes in response to developmental or environmental signals. Compared to more classical protein regulators, the list of ncRNAs that regulate mRNA transcription in mammalian cells is still small; however, the rate at which new ncRNA transcriptional regulators are being discovered is rapid, suggesting that models for how gene expression is controlled will continue to be redefined as this field develops.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22300815      PMCID: PMC3323709          DOI: 10.1016/j.tibs.2011.12.003

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  65 in total

1.  The protein CTCF is required for the enhancer blocking activity of vertebrate insulators.

Authors:  A C Bell; A G West; G Felsenfeld
Journal:  Cell       Date:  1999-08-06       Impact factor: 41.582

2.  The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock.

Authors:  Tiffany A Allen; Sandra Von Kaenel; James A Goodrich; Jennifer F Kugel
Journal:  Nat Struct Mol Biol       Date:  2004-08-08       Impact factor: 15.369

Review 3.  Short retroposons in eukaryotic genomes.

Authors:  Dimitri A Kramerov; Nikita S Vassetzky
Journal:  Int Rev Cytol       Date:  2005

Review 4.  The silence of the ribosomal RNA genes.

Authors:  R Santoro
Journal:  Cell Mol Life Sci       Date:  2005-09       Impact factor: 9.261

Review 5.  Regulation of X-chromosome inactivation by the X-inactivation centre.

Authors:  Sandrine Augui; Elphège P Nora; Edith Heard
Journal:  Nat Rev Genet       Date:  2011-06       Impact factor: 53.242

6.  Genes specifically expressed at growth arrest of mammalian cells.

Authors:  C Schneider; R M King; L Philipson
Journal:  Cell       Date:  1988-09-09       Impact factor: 41.582

7.  A steroid receptor coactivator, SRA, functions as an RNA and is present in an SRC-1 complex.

Authors:  R B Lanz; N J McKenna; S A Onate; U Albrecht; J Wong; S Y Tsai; M J Tsai; B W O'Malley
Journal:  Cell       Date:  1999-04-02       Impact factor: 41.582

8.  Regulation of nuclear receptor activity by a pseudouridine synthase through posttranscriptional modification of steroid receptor RNA activator.

Authors:  Xiansi Zhao; Jeffrey R Patton; Shannon L Davis; Brian Florence; Sarah J Ames; Remco A Spanjaard
Journal:  Mol Cell       Date:  2004-08-27       Impact factor: 17.970

9.  Cell stress and translational inhibitors transiently increase the abundance of mammalian SINE transcripts.

Authors:  W M Liu; W M Chu; P V Choudary; C W Schmid
Journal:  Nucleic Acids Res       Date:  1995-05-25       Impact factor: 16.971

10.  B2 RNA binds directly to RNA polymerase II to repress transcript synthesis.

Authors:  Celso A Espinoza; Tiffany A Allen; Aaron R Hieb; Jennifer F Kugel; James A Goodrich
Journal:  Nat Struct Mol Biol       Date:  2004-08-08       Impact factor: 15.369

View more
  57 in total

Review 1.  Regulatory non-coding RNAs: revolutionizing the RNA world.

Authors:  Biao Huang; Rongxin Zhang
Journal:  Mol Biol Rep       Date:  2014-02-19       Impact factor: 2.316

2.  LncRNA NORAD is repressed by the YAP pathway and suppresses lung and breast cancer metastasis by sequestering S100P.

Authors:  Boon-Shing Tan; Min-Chi Yang; Shaifali Singh; Yu-Chi Chou; Hsin-Yi Chen; Ming-Yang Wang; Yi-Ching Wang; Ruey-Hwa Chen
Journal:  Oncogene       Date:  2019-04-09       Impact factor: 9.867

Review 3.  An evolving understanding of nuclear receptor coregulator proteins.

Authors:  Christopher J Millard; Peter J Watson; Louise Fairall; John W R Schwabe
Journal:  J Mol Endocrinol       Date:  2013-11-07       Impact factor: 5.098

4.  Truncated SRA RNA derivatives inhibit estrogen receptor-α-mediated transcription.

Authors:  Euihan Jung; Seonghui Jang; Jungmin Lee; Youngmi Kim; Heegwon Shin; Hee-Sung Park; Younghoon Lee
Journal:  Mol Biol Rep       Date:  2016-07-12       Impact factor: 2.316

5.  Long non-coding RNA CARLo-5 is a negative prognostic factor and exhibits tumor pro-oncogenic activity in non-small cell lung cancer.

Authors:  Jie Luo; Liang Tang; Jie Zhang; Jian Ni; Hai-ping Zhang; Ling Zhang; Jian-fang Xu; Di Zheng
Journal:  Tumour Biol       Date:  2014-08-17

Review 6.  Functions of long noncoding RNAs in the nucleus.

Authors:  Bin Yu; Ge Shan
Journal:  Nucleus       Date:  2016-04-25       Impact factor: 4.197

Review 7.  A Structural Perspective on Readout of Epigenetic Histone and DNA Methylation Marks.

Authors:  Dinshaw J Patel
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-03-01       Impact factor: 10.005

8.  The function of homeobox genes and lncRNAs in cancer.

Authors:  Yingchao Wang; Yuan Dang; Jingfeng Liu; Xiaojuan Ouyang
Journal:  Oncol Lett       Date:  2016-07-21       Impact factor: 2.967

9.  Quantitative Proteomics Analysis Reveals Novel Insights into Mechanisms of Action of Long Noncoding RNA Hox Transcript Antisense Intergenic RNA (HOTAIR) in HeLa Cells.

Authors:  Peng Zheng; Qian Xiong; Ying Wu; Ying Chen; Zhuo Chen; Joy Fleming; Ding Gao; Lijun Bi; Feng Ge
Journal:  Mol Cell Proteomics       Date:  2015-03-11       Impact factor: 5.911

10.  Up-regulation of long non-coding HOTTIP functions as an oncogene by regulating HOXA13 in non-small cell lung cancer.

Authors:  Yulan Sang; Fucheng Zhou; Dongjie Wang; Xin Bi; Xuanxi Liu; Zhen Hao; Qingsong Li; Wei Zhang
Journal:  Am J Transl Res       Date:  2016-05-15       Impact factor: 4.060

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.