Literature DB >> 22297696

Alkalilactibacillus ikkensis, gen. nov., sp. nov., a novel enzyme-producing bacterium from a cold and alkaline environment in Greenland.

Mariane Schmidt1, Anders Priemé, Anders Johansen, Peter Stougaard.   

Abstract

Three novel Gram-positive, endospore-forming bacteria were isolated from a cold and alkaline environment. Phylogenetic analysis showed that the strains were almost identical, and that they were related to Natronobacillus azotifigens 24KS-1(T) (95.8% identity), Paraliobacillus quinghaiensis YIM-C158(T) (95.1%), Paraliobacillus ryukyuensis O15-7(T) (94.5%), and Halolactibacillus miurensis M23-1(T) (93.9%). The isolates produced amylase, α-galactosidase, β-galactosidase, and β-glucuronidase, and showed optimal growth at pH 10, at 20°C, and at 2-8% (w/v) NaCl. Major fatty acids were C(14:0) (10.6-11.6%), anteiso-C(15:0) (25.7-32.7%), C(16:1) ω11c (12.2-16.0%), and C(16:0) (14.0-20.4%). The major polar lipids were diphosphatidylglycerol and phosphatidylglycerol, and meso-diaminopimelic acid was found in the cell-wall peptidoglycan. The G+C content was 38.4%. DNA-DNA hybridization between strain GCM68(T) and H. miurensis M23-1(T) was 32.4%, while hybridization to N. azotifigens 24KS-1(T), Amphibacillus tropicus Z-7792(T), and Paraliobacillus ryukyuensis O15-7(T) was below 30%. The phylogenetic analysis and G+C content place strain GCM68(T) in relation to species belonging to Bacillus rRNA group 1, but phylogenetic and physiologic data combined with chemotaxonomic analyses support our proposal for a new genus, Alkalilactibacillus, gen. nov., with the novel species Alkalilactibacillus ikkensis, sp. nov. (type strain is GCM68(T) = DSM 19937 = LMG 24405).

Entities:  

Year:  2012        PMID: 22297696     DOI: 10.1007/s00792-012-0430-7

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  20 in total

1.  Validation of publication of new names and new combinations previously effectively published outside the IJSEM. International Journal of Systematic and Evolutionary Microbiology.

Authors: 
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

2.  Using phospholipid fatty acid technique to study short-term effects of the biological control agent Pseudomonas fluorescens DR54 on the microbial microbiota in barley rhizosphere.

Authors:  A Johansen; S Olsson
Journal:  Microb Ecol       Date:  2005-06-17       Impact factor: 4.552

3.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

4.  Natronobacillus azotifigens gen. nov., sp. nov., an anaerobic diazotrophic haloalkaliphile from soda-rich habitats.

Authors:  I D Sorokin; E V Zadorina; I K Kravchenko; E S Boulygina; T P Tourova; D Y Sorokin
Journal:  Extremophiles       Date:  2008-09-04       Impact factor: 2.395

5.  A rapid method for the base ratio determination of bacterial DNA.

Authors:  P Cashion; M A Holder-Franklin; J McCully; M Franklin
Journal:  Anal Biochem       Date:  1977-08       Impact factor: 3.365

6.  Studies on the spectrophotometric determination of DNA hybridization from renaturation rates.

Authors:  V A Huss; H Festl; K H Schleifer
Journal:  Syst Appl Microbiol       Date:  1983       Impact factor: 4.022

7.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

8.  Identification, cloning and expression of a cold-active beta-galactosidase from a novel Arctic bacterium, Alkalilactibacillus ikkense.

Authors:  Mariane Schmidt; Peter Stougaard
Journal:  Environ Technol       Date:  2010-09       Impact factor: 3.247

9.  Influence of salt concentration on the cellular fatty acid composition of the moderately halophilic bacterium Halomonas salina.

Authors:  M J Valderrama; M Monteoliva-Sanchez; E Quesada; A Ramos-Cormenzana
Journal:  Res Microbiol       Date:  1998-10       Impact factor: 3.992

10.  Gracilibacillus orientalis sp. nov., a novel moderately halophilic bacterium isolated from a salt lake in Inner Mongolia, China.

Authors:  I J Carrasco; M C Márquez; X Yanfen; Y Ma; D A Cowan; B E Jones; W D Grant; A Ventosa
Journal:  Int J Syst Evol Microbiol       Date:  2006-03       Impact factor: 2.747

View more
  1 in total

1.  Discovery of novel enzymes with industrial potential from a cold and alkaline environment by a combination of functional metagenomics and culturing.

Authors:  Jan Kjølhede Vester; Mikkel Andreas Glaring; Peter Stougaard
Journal:  Microb Cell Fact       Date:  2014-05-20       Impact factor: 5.328

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.