Literature DB >> 22297531

Genome gating in tailed bacteriophage capsids.

Paulo Tavares1, Sophie Zinn-Justin, Elena V Orlova.   

Abstract

Tailed bacteriophages use a portal system for genome entry and exit from viral capsids. Here, we review the mechanisms how these movements are controlled by the genome gatekeeper that assembles at the portal structure. Phage DNA is packaged at high pressure inside the viral capsid by a powerful motor. The viral genome is translocated through the central channel of the portal protein found at a single vertex of the capsid. Packaging is normally terminated by endonucleolytic cleavage of the substrate DNA followed by disassembly of the packaging motor and closure of the portal system, preventing leakage of the viral genome. This can be achieved either by conformational changes in the portal protein or by sequential addition of proteins that extend the portal channel (adaptors) and physically close it preventing DNA exit (stoppers). The resulting connector structure provides the interface for assembly of short tails (podoviruses) or for attachment of preformed long tails (siphoviruses and myoviruses). The connector maintains the viral DNA correctly positioned for ejection that is triggered by interaction of the phage particle with bacterial receptors. Recent exciting advances are providing new molecular insights on the mechanisms that ensure precise coordination of these critical steps required both for stable viral genome packaging and for its efficient release to initiate infection.

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Year:  2012        PMID: 22297531     DOI: 10.1007/978-1-4614-0980-9_25

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  15 in total

1.  Structure-function analysis of the DNA translocating portal of the bacteriophage T4 packaging machine.

Authors:  Victor Padilla-Sanchez; Song Gao; Hyung Rae Kim; Daisuke Kihara; Lei Sun; Michael G Rossmann; Venigalla B Rao
Journal:  J Mol Biol       Date:  2013-10-11       Impact factor: 5.469

Review 2.  Molecular architecture of tailed double-stranded DNA phages.

Authors:  Andrei Fokine; Michael G Rossmann
Journal:  Bacteriophage       Date:  2014-02-21

3.  Structural characterization of the bacteriophage T7 tail machinery.

Authors:  Ana Cuervo; Mar Pulido-Cid; Mónica Chagoyen; Rocío Arranz; Verónica A González-García; Carmela Garcia-Doval; José R Castón; José M Valpuesta; Mark J van Raaij; Jaime Martín-Benito; José L Carrascosa
Journal:  J Biol Chem       Date:  2013-07-24       Impact factor: 5.157

Review 4.  Slow and steady wins the race: physical limits on the rate of viral DNA packaging.

Authors:  Paul J Jardine
Journal:  Curr Opin Virol       Date:  2019-04-17       Impact factor: 7.090

5.  Complete genome analysis of bacteriophage EFC1 infecting Enterococcus faecalis from chicken.

Authors:  Qi Wang; Na Liu
Journal:  Arch Microbiol       Date:  2022-06-22       Impact factor: 2.552

6.  Characterization of the Bacteriophage BUCT603 and Therapeutic Potential Evaluation Against Drug-Resistant Stenotrophomonas maltophilia in a Mouse Model.

Authors:  Pengjun Han; Wenjing Zhang; Mingfang Pu; Yahao Li; Lihua Song; Xiaoping An; Mengzhe Li; Fei Li; Shuyan Zhang; Huahao Fan; Yigang Tong
Journal:  Front Microbiol       Date:  2022-07-05       Impact factor: 6.064

7.  Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components.

Authors:  Yvan Zivanovic; Fabrice Confalonieri; Luc Ponchon; Rudi Lurz; Mohamed Chami; Ali Flayhan; Madalena Renouard; Alexis Huet; Paulette Decottignies; Alan R Davidson; Cécile Breyton; Pascale Boulanger
Journal:  J Virol       Date:  2013-11-06       Impact factor: 5.103

8.  Structural rearrangements in the phage head-to-tail interface during assembly and infection.

Authors:  Yuriy Chaban; Rudi Lurz; Sandrine Brasilès; Charlène Cornilleau; Matthia Karreman; Sophie Zinn-Justin; Paulo Tavares; Elena V Orlova
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-19       Impact factor: 11.205

9.  Automated classification of tailed bacteriophages according to their neck organization.

Authors:  Anne Lopes; Paulo Tavares; Marie-Agnès Petit; Raphaël Guérois; Sophie Zinn-Justin
Journal:  BMC Genomics       Date:  2014-11-27       Impact factor: 3.969

10.  The nuclease domain of the SPP1 packaging motor coordinates DNA cleavage and encapsidation.

Authors:  Charlène Cornilleau; Noureddine Atmane; Eric Jacquet; Callum Smits; Juan C Alonso; Paulo Tavares; Leonor Oliveira
Journal:  Nucleic Acids Res       Date:  2012-10-30       Impact factor: 16.971

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