Literature DB >> 22293829

RNA driving the epigenetic bus.

John S Mattick1.   

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Year:  2012        PMID： 22293829      PMCID： PMC3273387          DOI： 10.1038/emboj.2011.479

Source DB:  PubMed          Journal:  EMBO J        ISSN： 0261-4189            Impact factor:   11.598


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  10 in total

1.  Specific expression of long noncoding RNAs in the mouse brain.

Authors:  Tim R Mercer; Marcel E Dinger; Susan M Sunkin; Mark F Mehler; John S Mattick
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-09       Impact factor: 11.205

2.  Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation.

Authors:  Marcel E Dinger; Paulo P Amaral; Tim R Mercer; Ken C Pang; Stephen J Bruce; Brooke B Gardiner; Marjan E Askarian-Amiri; Kelin Ru; Giulia Soldà; Cas Simons; Susan M Sunkin; Mark L Crowe; Sean M Grimmond; Andrew C Perkins; John S Mattick
Journal:  Genome Res       Date:  2008-06-18       Impact factor: 9.043

Review 3.  RNA traffic control of chromatin complexes.

Authors:  Magdalena J Koziol; John L Rinn
Journal:  Curr Opin Genet Dev       Date:  2010-03-31       Impact factor: 5.578

4.  Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors.

Authors:  Shi-Yan Ng; Rory Johnson; Lawrence W Stanton
Journal:  EMBO J       Date:  2011-12-23       Impact factor: 11.598

5.  Targeted RNA sequencing reveals the deep complexity of the human transcriptome.

Authors:  Tim R Mercer; Daniel J Gerhardt; Marcel E Dinger; Joanna Crawford; Cole Trapnell; Jeffrey A Jeddeloh; John S Mattick; John L Rinn
Journal:  Nat Biotechnol       Date:  2011-11-13       Impact factor: 54.908

Review 6.  Epigenetics in alternative pre-mRNA splicing.

Authors:  Reini F Luco; Mariano Allo; Ignacio E Schor; Alberto R Kornblihtt; Tom Misteli
Journal:  Cell       Date:  2011-01-07       Impact factor: 41.582

7.  Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation.

Authors:  Tim R Mercer; Irfan A Qureshi; Solen Gokhan; Marcel E Dinger; Guangyu Li; John S Mattick; Mark F Mehler
Journal:  BMC Neurosci       Date:  2010-02-05       Impact factor: 3.288

8.  Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression.

Authors:  Ahmad M Khalil; Mitchell Guttman; Maite Huarte; Manuel Garber; Arjun Raj; Dianali Rivea Morales; Kelly Thomas; Aviva Presser; Bradley E Bernstein; Alexander van Oudenaarden; Aviv Regev; Eric S Lander; John L Rinn
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-01       Impact factor: 11.205

9.  Nucleosomes are preferentially positioned at exons in somatic and sperm cells.

Authors:  Satu Nahkuri; Ryan J Taft; John S Mattick
Journal:  Cell Cycle       Date:  2009-10-25       Impact factor: 4.534

10.  lincRNAs act in the circuitry controlling pluripotency and differentiation.

Authors:  Mitchell Guttman; Julie Donaghey; Bryce W Carey; Manuel Garber; Jennifer K Grenier; Glen Munson; Geneva Young; Anne Bergstrom Lucas; Robert Ach; Laurakay Bruhn; Xiaoping Yang; Ido Amit; Alexander Meissner; Aviv Regev; John L Rinn; David E Root; Eric S Lander
Journal:  Nature       Date:  2011-08-28       Impact factor: 49.962
  10 in total
  5 in total

Review 1.  Why detailed model gene studies in higher eukaryotes are still necessary.

Authors:  Constanze Bonifer
Journal:  Immunology       Date:  2013-06       Impact factor: 7.397

2.  Long interspersed nuclear elements (LINEs) show tissue-specific, mosaic genome and methylation-unrestricted, widespread expression of noncoding RNAs in somatic tissues of the rat.

Authors:  Deepak K Singh; Pramod C Rath
Journal:  RNA Biol       Date:  2012-10-12       Impact factor: 4.652

Review 3.  Epigenetic regulation of macrophage polarization and function.

Authors:  Lionel B Ivashkiv
Journal:  Trends Immunol       Date:  2012-12-04       Impact factor: 16.687

4.  The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation.

Authors:  Felipe C Beckedorff; Ana C Ayupe; Renan Crocci-Souza; Murilo S Amaral; Helder I Nakaya; Daniela T Soltys; Carlos F M Menck; Eduardo M Reis; Sergio Verjovski-Almeida
Journal:  PLoS Genet       Date:  2013-08-22       Impact factor: 5.917

5.  The non-obese diabetic mouse sequence, annotation and variation resource: an aid for investigating type 1 diabetes.

Authors:  Charles A Steward; Jose M Gonzalez; Steve Trevanion; Dan Sheppard; Giselle Kerry; James G R Gilbert; Linda S Wicker; Jane Rogers; Jennifer L Harrow
Journal:  Database (Oxford)       Date:  2013-05-31       Impact factor: 3.451
  5 in total

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