Literature DB >> 22290493

CryB from Rhodobacter sphaeroides: a unique class of cryptochromes with new cofactors.

Yann Geisselbrecht1, Sebastian Frühwirth, Claudia Schroeder, Antonio J Pierik, Gabriele Klug, Lars-Oliver Essen.   

Abstract

Cryptochromes and photolyases are structurally related but have different biological functions in signalling and DNA repair. Proteobacteria and cyanobacteria harbour a new class of cryptochromes, called CryPro. We have solved the 2.7 Å structure of one of its members, cryptochrome B from Rhodobacter sphaeroides, which is a regulator of photosynthesis gene expression. The structure reveals that, in addition to the photolyase-like fold, CryB contains two cofactors only conserved in the CryPro subfamily: 6,7-dimethyl-8-ribityl-lumazine in the antenna-binding domain and a [4Fe-4S] cluster within the catalytic domain. The latter closely resembles the iron-sulphur cluster harbouring the large primase subunit PriL, indicating that PriL is evolutionarily related to the CryPro class of cryptochromes.

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Year:  2012        PMID： 22290493      PMCID： PMC3323124          DOI： 10.1038/embor.2012.2

Source DB:  PubMed          Journal:  EMBO Rep        ISSN： 1469-221X            Impact factor:   8.807


  32 in total

1.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

2.  Crystal structure and mechanism of a DNA (6-4) photolyase.

Authors:  Melanie J Maul; Thomas R M Barends; Andreas F Glas; Max J Cryle; Tatiana Domratcheva; Sabine Schneider; Ilme Schlichting; Thomas Carell
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

3.  Crystal structure of the C-terminal domain of human DNA primase large subunit: implications for the mechanism of the primase-polymerase α switch.

Authors:  Vinod B Agarkar; Nigar D Babayeva; Youri I Pavlov; Tahir H Tahirov
Journal:  Cell Cycle       Date:  2011-03-15       Impact factor: 4.534

4.  Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules: implication of a novel light-harvesting cofactor.

Authors:  Masahiro Fujihashi; Nobutaka Numoto; Yukiko Kobayashi; Akira Mizushima; Masanari Tsujimura; Akira Nakamura; Yutaka Kawarabayasi; Kunio Miki
Journal:  J Mol Biol       Date:  2006-10-07       Impact factor: 5.469

5.  Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.

Authors:  Alexandra Mees; Tobias Klar; Petra Gnau; Ulrich Hennecke; Andre P M Eker; Thomas Carell; Lars-Oliver Essen
Journal:  Science       Date:  2004-12-03       Impact factor: 47.728

6.  Shared active site architecture between the large subunit of eukaryotic primase and DNA photolyase.

Authors:  Ludovic Sauguet; Sebastian Klinge; Rajika L Perera; Joseph D Maman; Luca Pellegrini
Journal:  PLoS One       Date:  2010-04-09       Impact factor: 3.240

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  More than a repair enzyme: Aspergillus nidulans photolyase-like CryA is a regulator of sexual development.

Authors:  Ozgür Bayram; Christoph Biesemann; Sven Krappmann; Paul Galland; Gerhard H Braus
Journal:  Mol Biol Cell       Date:  2008-05-21       Impact factor: 4.138

9.  RpoH(II) activates oxidative-stress defense systems and is controlled by RpoE in the singlet oxygen-dependent response in Rhodobacter sphaeroides.

Authors:  Aaron M Nuss; Jens Glaeser; Gabriele Klug
Journal:  J Bacteriol       Date:  2008-10-31       Impact factor: 3.490

10.  A photolyase-like protein from Agrobacterium tumefaciens with an iron-sulfur cluster.

Authors:  Inga Oberpichler; Antonio J Pierik; Janine Wesslowski; Richard Pokorny; Ran Rosen; Michal Vugman; Fan Zhang; Olivia Neubauer; Eliora Z Ron; Alfred Batschauer; Tilman Lamparter
Journal:  PLoS One       Date:  2011-10-31       Impact factor: 3.240
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  30 in total

1.  A flavin binding cryptochrome photoreceptor responds to both blue and red light in Chlamydomonas reinhardtii.

Authors:  Benedikt Beel; Katja Prager; Meike Spexard; Severin Sasso; Daniel Weiss; Nico Müller; Mark Heinnickel; David Dewez; Danielle Ikoma; Arthur R Grossman; Tilman Kottke; Maria Mittag
Journal:  Plant Cell       Date:  2012-07-06       Impact factor: 11.277

Review 2.  Algal photoreceptors: in vivo functions and potential applications.

Authors:  Arash Kianianmomeni; Armin Hallmann
Journal:  Planta       Date:  2013-10-01       Impact factor: 4.116

3.  Ultrafast photoreduction dynamics of a new class of CPD photolyases.

Authors:  Fabien Lacombat; Agathe Espagne; Nadia Dozova; Pascal Plaza; Pavel Müller; Hans-Joachim Emmerich; Martin Saft; Lars-Oliver Essen
Journal:  Photochem Photobiol Sci       Date:  2021-05-11       Impact factor: 3.982

4.  Light Modulates the Physiology of Nonphototrophic Actinobacteria.

Authors:  Julia A Maresca; Jessica L Keffer; Priscilla P Hempel; Shawn W Polson; Olga Shevchenko; Jaysheel Bhavsar; Deborah Powell; Kelsey J Miller; Archana Singh; Martin W Hahn
Journal:  J Bacteriol       Date:  2019-04-24       Impact factor: 3.490

5.  Structural and evolutionary aspects of antenna chromophore usage by class II photolyases.

Authors:  Stephan Kiontke; Petra Gnau; Reinhard Haselsberger; Alfred Batschauer; Lars-Oliver Essen
Journal:  J Biol Chem       Date:  2014-05-21       Impact factor: 5.157

Review 6.  Magnetic field effects in flavoproteins and related systems.

Authors:  Emrys W Evans; Charlotte A Dodson; Kiminori Maeda; Till Biskup; C J Wedge; Christiane R Timmel
Journal:  Interface Focus       Date:  2013-10-06       Impact factor: 3.906

7.  The class III cyclobutane pyrimidine dimer photolyase structure reveals a new antenna chromophore binding site and alternative photoreduction pathways.

Authors:  Patrick Scheerer; Fan Zhang; Jacqueline Kalms; David von Stetten; Norbert Krauß; Inga Oberpichler; Tilman Lamparter
Journal:  J Biol Chem       Date:  2015-03-17       Impact factor: 5.157

8.  Crystal structure of a prokaryotic (6-4) photolyase with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore.

Authors:  Fan Zhang; Patrick Scheerer; Inga Oberpichler; Tilman Lamparter; Norbert Krauß
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-15       Impact factor: 11.205

9.  Fungal cryptochrome with DNA repair activity reveals an early stage in cryptochrome evolution.

Authors:  Victor G Tagua; Marcell Pausch; Maike Eckel; Gabriel Gutiérrez; Alejandro Miralles-Durán; Catalina Sanz; Arturo P Eslava; Richard Pokorny; Luis M Corrochano; Alfred Batschauer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-17       Impact factor: 11.205

10.  Extended Electron-Transfer in Animal Cryptochromes Mediated by a Tetrad of Aromatic Amino Acids.

Authors:  Daniel Nohr; Sophie Franz; Ryan Rodriguez; Bernd Paulus; Lars-Oliver Essen; Stefan Weber; Erik Schleicher
Journal:  Biophys J       Date:  2016-07-26       Impact factor: 4.033
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