Literature DB >> 15576622

Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.

Alexandra Mees1, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen.   

Abstract

DNA photolyases use light energy to repair DNA that comprises ultraviolet-induced lesions such as the cis-syn cyclobutane pyrimidine dimers (CPDs). Here we report the crystal structure of a DNA photolyase bound to duplex DNA that is bent by 50 degrees and comprises a synthetic CPD lesion. This CPD lesion is flipped into the active site and split there into two thymines by synchrotron radiation at 100 K. Although photolyases catalyze blue light-driven CPD cleavage only above 200 K, this structure apparently mimics a structural substate during light-driven DNA repair in which back-flipping of the thymines into duplex DNA has not yet taken place.

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Year:  2004        PMID: 15576622     DOI: 10.1126/science.1101598

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  113 in total

1.  A gain-of-function mutation of Arabidopsis cryptochrome1 promotes flowering.

Authors:  Vivien Exner; Cristina Alexandre; Gesa Rosenfeldt; Pietro Alfarano; Mena Nater; Amedeo Caflisch; Wilhelm Gruissem; Alfred Batschauer; Lars Hennig
Journal:  Plant Physiol       Date:  2010-10-06       Impact factor: 8.340

2.  Light-induced conformational change and product release in DNA repair by (6-4) photolyase.

Authors:  Masato Kondoh; Kenichi Hitomi; Junpei Yamamoto; Takeshi Todo; Shigenori Iwai; Elizabeth D Getzoff; Masahide Terazima
Journal:  J Am Chem Soc       Date:  2011-01-27       Impact factor: 15.419

3.  Watching DNA repair in real time.

Authors:  Alexei Stuchebrukhov
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-21       Impact factor: 11.205

4.  CryB from Rhodobacter sphaeroides: a unique class of cryptochromes with new cofactors.

Authors:  Yann Geisselbrecht; Sebastian Frühwirth; Claudia Schroeder; Antonio J Pierik; Gabriele Klug; Lars-Oliver Essen
Journal:  EMBO Rep       Date:  2012-03-01       Impact factor: 8.807

5.  Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM.

Authors:  Rou-Jia Sung; Michael Zhang; Yan Qi; Gregory L Verdine
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

Review 6.  Dynamics and mechanisms of DNA repair by photolyase.

Authors:  Zheyun Liu; Lijuan Wang; Dongping Zhong
Journal:  Phys Chem Chem Phys       Date:  2015-05-14       Impact factor: 3.676

7.  Characterization of a cold-adapted DNA photolyase from C. psychrerythraea 34H.

Authors:  Sudipto Munshi; Ananthi Rajamoorthi; Robert J Stanley
Journal:  Extremophiles       Date:  2017-07-19       Impact factor: 2.395

8.  Base pair opening in a deoxynucleotide duplex containing a cis-syn thymine cyclobutane dimer lesion.

Authors:  Belinda B Wenke; Leah N Huiting; Elisa B Frankel; Benjamin F Lane; Megan E Núñez
Journal:  Biochemistry       Date:  2013-12-11       Impact factor: 3.162

9.  Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.

Authors:  Richard Pokorny; Tobias Klar; Ulrich Hennecke; Thomas Carell; Alfred Batschauer; Lars-Oliver Essen
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-12       Impact factor: 11.205

10.  Crystal structure of a prokaryotic (6-4) photolyase with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore.

Authors:  Fan Zhang; Patrick Scheerer; Inga Oberpichler; Tilman Lamparter; Norbert Krauß
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-15       Impact factor: 11.205

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