Literature DB >> 22286238

Self-made phage libraries with heterologous inserts in the Mtd of Bordetella bronchiseptica.

Cathie M Overstreet1, Tom Z Yuan, Aron M Levin, Calvin Kong, John G Coroneus, Gregory A Weiss.   

Abstract

Phage display libraries are widely used as tools for identifying, dissecting and optimizing ligands. Development of a simple method to access greater library diversities could expedite and expand the technique. This paper reports progress toward harnessing the naturally occurring diversity generating retroelement used by Bordetella bronchiseptica bacteriophage to alter its tail-fiber protein. Mutagenesis and testing identified four sites amenable to the insertion of <19-residue heterologous peptides within the variable region. Such sites allow auto-generation of peptide libraries surrounded by a scaffold with additional variations. The resultant self-made phage libraries were used successfully for selections targeting anti-FLAG antibody, immobilized metal affinity chromatography microtiter plates and HIV-1 gp41. The reported experiments demonstrate the utility of the major tropism determinant protein of B.bronchiseptica as a natural scaffold for diverse, phage-constructed libraries with heterologous self-made phage libraries.

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Year:  2012        PMID: 22286238      PMCID: PMC3302436          DOI: 10.1093/protein/gzr068

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  30 in total

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Authors:  T L Gururaja; S Narasimhamurthy; D G Payan; D C Anderson
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5.  Highly sensitive in vitro selections for DNA-linked synthetic small molecules with protein binding affinity and specificity.

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Journal:  J Am Chem Soc       Date:  2003-10-15       Impact factor: 15.419

6.  In vivo targeting of organic calcium sensors via genetically selected peptides.

Authors:  Kevin M Marks; Michael Rosinov; Garry P Nolan
Journal:  Chem Biol       Date:  2004-03

7.  Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage.

Authors:  Minghsun Liu; Rajendar Deora; Sergei R Doulatov; Mari Gingery; Frederick A Eiserling; Andrew Preston; Duncan J Maskell; Robert W Simons; Peggy A Cotter; Julian Parkhill; Jeff F Miller
Journal:  Science       Date:  2002-03-15       Impact factor: 47.728

8.  Three-dimensional structure of tropism-switching Bordetella bacteriophage.

Authors:  Wei Dai; Asher Hodes; Wong H Hui; Mari Gingery; Jeff F Miller; Z Hong Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-16       Impact factor: 11.205

9.  Genomic and genetic analysis of Bordetella bacteriophages encoding reverse transcriptase-mediated tropism-switching cassettes.

Authors:  Minghsun Liu; Mari Gingery; Sergei R Doulatov; Yichin Liu; Asher Hodes; Stephen Baker; Paul Davis; Mark Simmonds; Carol Churcher; Karen Mungall; Michael A Quail; Andrew Preston; Eric T Harvill; Duncan J Maskell; Frederick A Eiserling; Julian Parkhill; Jeff F Miller
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

Review 10.  Exploring biochemistry and cellular biology with protein libraries.

Authors:  Juan E Diaz; Brett E Howard; Marc S Neubauer; Allison Olszewski; Gregory A Weiss
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  3 in total

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Authors:  Fatemeh Sharifi; Yuzhen Ye
Journal:  Nucleic Acids Res       Date:  2019-07-02       Impact factor: 16.971

2.  Analysis of a comprehensive dataset of diversity generating retroelements generated by the program DiGReF.

Authors:  Thomas Schillinger; Mohamed Lisfi; Jingyun Chi; John Cullum; Nora Zingler
Journal:  BMC Genomics       Date:  2012-08-28       Impact factor: 3.969

3.  Protein engineering with biosynthesized libraries from Bordetella bronchiseptica bacteriophage.

Authors:  Tom Z Yuan; Cathie M Overstreet; Issa S Moody; Gregory A Weiss
Journal:  PLoS One       Date:  2013-02-07       Impact factor: 3.240

  3 in total

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