Literature DB >> 22282334

Draft genome sequence of the coccolithovirus Emiliania huxleyi virus 202.

Jozef I Nissimov1, Charlotte A Worthy, Paul Rooks, Johnathan A Napier, Susan A Kimmance, Matthew R Henn, Hiroyuki Ogata, Michael J Allen.   

Abstract

Emiliania huxleyi virus 202 (EhV-202) is a member of the Coccolithoviridae, a group of viruses that infect the marine coccolithophorid Emiliania huxleyi. EhV-202 has a 160- to 180-nm-diameter icosahedral structure and a genome of approximately 407 kbp, consisting of 485 coding sequences (CDSs). Here we describe the genomic features of EhV-202, together with a draft genome sequence and its annotation, highlighting the homology and heterogeneity of this genome in comparison with the EhV-86 reference genome.

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Year:  2012        PMID： 22282334      PMCID： PMC3302404          DOI： 10.1128/JVI.06863-11

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  9 in total

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2.  IMG ER: a system for microbial genome annotation expert review and curation.

Authors:  Victor M Markowitz; Konstantinos Mavromatis; Natalia N Ivanova; I-Min A Chen; Ken Chu; Nikos C Kyrpides
Journal:  Bioinformatics       Date:  2009-06-27       Impact factor: 6.937

3.  Complete genome sequence and lytic phase transcription profile of a Coccolithovirus.

Authors:  William H Wilson; Declan C Schroeder; Michael J Allen; Matthew T G Holden; Julian Parkhill; Bart G Barrell; Carol Churcher; Nancy Hamlin; Karen Mungall; Halina Norbertczak; Michael A Quail; Claire Price; Ester Rabbinowitsch; Danielle Walker; Marie Craigon; Douglas Roy; Peter Ghazal
Journal:  Science       Date:  2005-08-12       Impact factor: 47.728

4.  Virus succession observed during an Emiliania huxleyi bloom.

Authors:  Declan C Schroeder; Joanne Oke; Matthew Hall; Gillian Malin; William H Wilson
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

Review 5.  The Phycodnaviridae: the story of how tiny giants rule the world.

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Journal:  PLoS One       Date:  2010-02-05       Impact factor: 3.240

7.  Draft genome sequence of the Coccolithovirus Emiliania huxleyi virus 203.

Authors:  Jozef I Nissimov; Charlotte A Worthy; Paul Rooks; Johnathan A Napier; Susan A Kimmance; Matthew R Henn; Hiroyuki Ogata; Michael J Allen
Journal:  J Virol       Date:  2011-12       Impact factor: 5.103

8.  Draft genome sequence of the coccolithovirus EhV-84.

Authors:  Jozef I Nissimov; Charlotte A Worthy; Paul Rooks; Johnathan A Napier; Susan A Kimmance; Matthew R Henn; Hiroyuki Ogata; Michael J Allen
Journal:  Stand Genomic Sci       Date:  2011-09-23

9.  Genome comparison of two Coccolithoviruses.

Authors:  Michael J Allen; Declan C Schroeder; Andrew Donkin; Katharine J Crawfurd; William H Wilson
Journal:  Virol J       Date:  2006-03-22       Impact factor: 4.099
  9 in total
  6 in total

1.  Functional inferences of environmental coccolithovirus biodiversity.

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Review 2.  Structural organization, evolution, and distribution of viral pyrimidine dimer-DNA glycosylases.

Authors:  Alexandra N Karmanova; Nikita A Nikulin; Andrei A Zimin
Journal:  Biophys Rev       Date:  2022-06-18

3.  Coccolithoviruses: A Review of Cross-Kingdom Genomic Thievery and Metabolic Thuggery.

Authors:  Jozef I Nissimov; António Pagarete; Fangrui Ma; Sean Cody; David D Dunigan; Susan A Kimmance; Michael J Allen
Journal:  Viruses       Date:  2017-03-18       Impact factor: 5.048

4.  Emerging Interaction Patterns in the Emiliania huxleyi-EhV System.

Authors:  Eliana Ruiz; Monique Oosterhof; Ruth-Anne Sandaa; Aud Larsen; António Pagarete
Journal:  Viruses       Date:  2017-03-22       Impact factor: 5.048

5.  A single-cell view on alga-virus interactions reveals sequential transcriptional programs and infection states.

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Journal:  Sci Adv       Date:  2020-05-20       Impact factor: 14.136

6.  Proton-transporting heliorhodopsins from marine giant viruses.

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Journal:  Elife       Date:  2022-09-06       Impact factor: 8.713
  6 in total

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