Literature DB >> 22277062

Fundamental thermochemical properties of amino acids: gas-phase and aqueous acidities and gas-phase heats of formation.

Michele L Stover1, Virgil E Jackson, Myrna H Matus, Margaret A Adams, Carolyn J Cassady, David A Dixon.   

Abstract

The gas-phase acidities of the 20 L-amino acids have been predicted at the composite G3(MP2) level. A broad range of structures of the neutral and anion were studied to determine the lowest energy conformer. Excellent agreement is found with the available experimental gas-phase deprotonation enthalpies, and the calculated values are within experimental error. We predict that tyrosine is deprotonated at the CO(2)H site. Cysteine is predicted to be deprotonated at the SH but the proton on the CO(2)H is shared with the S(-) site. Self-consistent reaction field (SCRF) calculations with the COSMO parametrization were used to predict the pK(a)'s of the non-zwitterion form in aqueous solution. The differences in the non-zwitterion pK(a) values were used to estimate the free energy difference between the zwitterion and nonzwitterion forms in solution. The heats of formation of the neutral compounds were calculated from atomization energies and isodesmic reactions to provide the first reliable set of these values in the gas phase. Further calculations were performed on five rare amino acids to predict their heats of formation, acidities, and pK(a) values.

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Year:  2012        PMID: 22277062     DOI: 10.1021/jp207271p

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  5 in total

1.  Studying the chemistry of cationized triacylglycerols using electrospray ionization mass spectrometry and density functional theory computations.

Authors:  J Stuart Grossert; Lisandra Cubero Herrera; Louis Ramaley; Jeremy E Melanson
Journal:  J Am Soc Mass Spectrom       Date:  2014-05-28       Impact factor: 3.109

2.  Weak Acid-Base Interactions of Histidine and Cysteine Affect the Charge States, Tertiary Structure, and Zn(II)-Binding of Heptapeptides.

Authors:  Yu-Fu Lin; Enas N Yousef; Efren Torres; Linh Truong; James M Zahnow; Cole B Donald; Ying Qin; Laurence A Angel
Journal:  J Am Soc Mass Spectrom       Date:  2019-07-22       Impact factor: 3.109

3.  A comparison of the effects of amide and acid groups at the C-terminus on the collision-induced dissociation of deprotonated peptides.

Authors:  Samantha S Bokatzian-Johnson; Michele L Stover; David A Dixon; Carolyn J Cassady
Journal:  J Am Soc Mass Spectrom       Date:  2012-07-26       Impact factor: 3.109

4.  Positive and negative ions of the amino acid histidine formed in low-energy electron collisions.

Authors:  Rebecca Meißner; Linda Feketeová; Andreas Bayer; Johannes Postler; Paulo Limão-Vieira; Stephan Denifl
Journal:  J Mass Spectrom       Date:  2019-11-06       Impact factor: 1.982

5.  Enthalpic and Entropic Contributions to Hydrophobicity.

Authors:  Michael Schauperl; Maren Podewitz; Birgit J Waldner; Klaus R Liedl
Journal:  J Chem Theory Comput       Date:  2016-08-16       Impact factor: 6.006

  5 in total

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