Literature DB >> 22275101

Genome sequence of the arsenite-oxidizing strain Agrobacterium tumefaciens 5A.

Xiuli Hao1, Yanbing Lin, Laurel Johnstone, Guanghui Liu, Gejiao Wang, Gehong Wei, Timothy McDermott, Christopher Rensing.   

Abstract

Microbial transformations of arsenic influence its mobility and toxicity. We report the draft genome sequence of the arsenite-oxidizing strain Agrobacterium tumefaciens 5A isolated from an As-contaminated soil in the Madison River Valley, MT. A large number of metal (or metalloid) resistance genes, especially contributing to arsenite oxidation, were identified.

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Year:  2012        PMID： 22275101      PMCID： PMC3272953          DOI： 10.1128/JB.06585-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  Crystal structure of the quorum-sensing protein LuxS reveals a catalytic metal site.

Authors:  M T Hilgers; M L Ludwig
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

2.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

Review 3.  Rhizosphere chemical dialogues: plant-microbe interactions.

Authors:  Dayakar V Badri; Tiffany L Weir; Daniel van der Lelie; Jorge M Vivanco
Journal:  Curr Opin Biotechnol       Date:  2009-10-28       Impact factor: 9.740

4.  Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.

Authors:  B Goodner; G Hinkle; S Gattung; N Miller; M Blanchard; B Qurollo; B S Goldman; Y Cao; M Askenazi; C Halling; L Mullin; K Houmiel; J Gordon; M Vaudin; O Iartchouk; A Epp; F Liu; C Wollam; M Allinger; D Doughty; C Scott; C Lappas; B Markelz; C Flanagan; C Crowell; J Gurson; C Lomo; C Sear; G Strub; C Cielo; S Slater
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

5.  Complex regulation of arsenite oxidation in Agrobacterium tumefaciens.

Authors:  Des R Kashyap; Lina M Botero; William L Franck; Daniel J Hassett; Timothy R McDermott
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

6.  A periplasmic arsenite-binding protein involved in regulating arsenite oxidation.

Authors:  Guanghui Liu; Mengyao Liu; Eun-Hae Kim; Walid S Maaty; Brian Bothner; Benfang Lei; Christopher Rensing; Gejiao Wang; Timothy R McDermott
Journal:  Environ Microbiol       Date:  2011-12-19       Impact factor: 5.491

Review 7.  Agrobacterium tumefaciens as an agent of disease.

Authors:  Matthew A Escobar; Abhaya M Dandekar
Journal:  Trends Plant Sci       Date:  2003-08       Impact factor: 18.313

8.  Bacterial populations associated with the oxidation and reduction of arsenic in an unsaturated soil.

Authors:  Richard E Macur; Colin R Jackson; Lina M Botero; Timothy R McDermott; William P Inskeep
Journal:  Environ Sci Technol       Date:  2004-01-01       Impact factor: 9.028

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  9 in total
  7 in total

1.  Involvement of RpoN in regulating bacterial arsenite oxidation.

Authors:  Yoon-Suk Kang; Brian Bothner; Christopher Rensing; Timothy R McDermott
Journal:  Appl Environ Microbiol       Date:  2012-06-01       Impact factor: 4.792

2.  Draft genome sequence of Agrobacterium albertimagni strain AOL15.

Authors:  William L Trimble; Le T Phung; Folker Meyer; Jack A Gilbert; Simon Silver
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

3.  Organization and regulation of the arsenite oxidase operon of the moderately acidophilic and facultative chemoautotrophic Thiomonas arsenitoxydans.

Authors:  Djamila Slyemi; Danielle Moinier; Emmanuel Talla; Violaine Bonnefoy
Journal:  Extremophiles       Date:  2013-08-24       Impact factor: 2.395

4.  In silico analysis of bacterial arsenic islands reveals remarkable synteny and functional relatedness between arsenate and phosphate.

Authors:  Hang Li; Mingshun Li; Yinyan Huang; Christopher Rensing; Gejiao Wang
Journal:  Front Microbiol       Date:  2013-11-20       Impact factor: 5.640

5.  Correlation models between environmental factors and bacterial resistance to antimony and copper.

Authors:  Zunji Shi; Zhan Cao; Dong Qin; Wentao Zhu; Qian Wang; Mingshun Li; Gejiao Wang
Journal:  PLoS One       Date:  2013-10-29       Impact factor: 3.240

6.  Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium.

Authors:  Florent Lassalle; Rémi Planel; Simon Penel; David Chapulliot; Valérie Barbe; Audrey Dubost; Alexandra Calteau; David Vallenet; Damien Mornico; Thomas Bigot; Laurent Guéguen; Ludovic Vial; Daniel Muller; Vincent Daubin; Xavier Nesme
Journal:  Genome Biol Evol       Date:  2017-12-01       Impact factor: 3.416

7.  Genomic and Biotechnological Characterization of the Heavy-Metal Resistant, Arsenic-Oxidizing Bacterium Ensifer sp. M14.

Authors:  George C diCenzo; Klaudia Debiec; Jan Krzysztoforski; Witold Uhrynowski; Alessio Mengoni; Camilla Fagorzi; Adrian Gorecki; Lukasz Dziewit; Tomasz Bajda; Grzegorz Rzepa; Lukasz Drewniak
Journal:  Genes (Basel)       Date:  2018-07-27       Impact factor: 4.096
  7 in total

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