Literature DB >> 22267987

A Pattern Mining Approach for Classifying Multivariate Temporal Data.

Iyad Batal1, Hamed Valizadegan, Gregory F Cooper, Milos Hauskrecht.   

Abstract

We study the problem of learning classification models from complex multivariate temporal data encountered in electronic health record systems. The challenge is to define a good set of features that are able to represent well the temporal aspect of the data. Our method relies on temporal abstractions and temporal pattern mining to extract the classification features. Temporal pattern mining usually returns a large number of temporal patterns, most of which may be irrelevant to the classification task. To address this problem, we present the minimal predictive temporal patterns framework to generate a small set of predictive and non-spurious patterns. We apply our approach to the real-world clinical task of predicting patients who are at risk of developing heparin induced thrombocytopenia. The results demonstrate the benefit of our approach in learning accurate classifiers, which is a key step for developing intelligent clinical monitoring systems.

Entities:  

Year:  2011        PMID: 22267987      PMCID: PMC3261774          DOI: 10.1109/BIBM.2011.39

Source DB:  PubMed          Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)        ISSN: 2156-1125


  5 in total

Review 1.  Heparin-induced thrombocytopenia: pathogenesis and management.

Authors:  Theodore E Warkentin
Journal:  Br J Haematol       Date:  2003-05       Impact factor: 6.998

2.  Medical temporal-knowledge discovery via temporal abstraction.

Authors:  Robert Moskovitch; Yuval Shahar
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

3.  Conditional outlier detection for clinical alerting.

Authors:  Milos Hauskrecht; Michal Valko; Iyad Batal; Gilles Clermont; Shyam Visweswaran; Gregory F Cooper
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

4.  Argatroban dosing of patients with heparin-induced thrombocytopenia and an elevated aPTT due to antiphospholipid antibody syndrome.

Authors:  Robert Pendleton; Michelle M Wheeler; George M Rodgers
Journal:  Ann Pharmacother       Date:  2006-03-28       Impact factor: 3.154

5.  Feature importance analysis for patient management decisions.

Authors:  Michal Valko; Milos Hauskrecht
Journal:  Stud Health Technol Inform       Date:  2010
  5 in total
  15 in total

1.  Improving Validity of Cause of Death on Death Certificates.

Authors:  Ryan A Hoffman; Janani Venugopalan; Li Qu; Hang Wu; May D Wang
Journal:  ACM BCB       Date:  2018-08

2.  Mining Recent Temporal Patterns for Event Detection in Multivariate Time Series Data.

Authors:  Iyad Batal; Dmitriy Fradkin; James Harrison; Fabian Moerchen; Milos Hauskrecht
Journal:  KDD       Date:  2012

3.  Mental Health Comorbidity Analysis in Pediatric Patients with Autism Spectrum Disorder Using Rhode Island Medical Claims Data.

Authors:  Katherine A Brown; Indra Neil Sarkar; Elizabeth S Chen
Journal:  AMIA Annu Symp Proc       Date:  2021-01-25

4.  Comparing lagged linear correlation, lagged regression, Granger causality, and vector autoregression for uncovering associations in EHR data.

Authors:  Matthew E Levine; David J Albers; George Hripcsak
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

5.  An Efficient Pattern Mining Approach for Event Detection in Multivariate Temporal Data.

Authors:  Iyad Batal; Gregory Cooper; Dmitriy Fradkin; James Harrison; Fabian Moerchen; Milos Hauskrecht
Journal:  Knowl Inf Syst       Date:  2015-01-21       Impact factor: 2.822

6.  Predictive modeling of respiratory tumor motion for real-time prediction of baseline shifts.

Authors:  A Balasubramanian; R Shamsuddin; B Prabhakaran; A Sawant
Journal:  Phys Med Biol       Date:  2017-01-11       Impact factor: 3.609

7.  Intelligent Mortality Reporting with FHIR.

Authors:  Ryan A Hoffman; Hang Wu; Janani Venugopalan; Paula Braun; May D Wang
Journal:  IEEE EMBS Int Conf Biomed Health Inform       Date:  2017-03-13

8.  Learning classification models with soft-label information.

Authors:  Quang Nguyen; Hamed Valizadegan; Milos Hauskrecht
Journal:  J Am Med Inform Assoc       Date:  2013-11-20       Impact factor: 4.497

9.  Methodological variations in lagged regression for detecting physiologic drug effects in EHR data.

Authors:  Matthew E Levine; David J Albers; George Hripcsak
Journal:  J Biomed Inform       Date:  2018-08-30       Impact factor: 6.317

10.  Learning classification models from multiple experts.

Authors:  Hamed Valizadegan; Quang Nguyen; Milos Hauskrecht
Journal:  J Biomed Inform       Date:  2013-09-13       Impact factor: 6.317

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