Literature DB >> 22264099

Crystallographic analysis of active site contributions to regiospecificity in the diiron enzyme toluene 4-monooxygenase.

Lucas J Bailey1, Justin F Acheson, Jason G McCoy, Nathaniel L Elsen, George N Phillips, Brian G Fox.   

Abstract

Crystal structures of toluene 4-monooxygenase hydroxylase in complex with reaction products and effector protein reveal active site interactions leading to regiospecificity. Complexes with phenolic products yield an asymmetric μ-phenoxo-bridged diiron center and a shift of diiron ligand E231 into a hydrogen bonding position with conserved T201. In contrast, complexes with inhibitors p-NH(2)-benzoate and p-Br-benzoate showed a μ-1,1 coordination of carboxylate oxygen between the iron atoms and only a partial shift in the position of E231. Among active site residues, F176 trapped the aromatic ring of products against a surface of the active site cavity formed by G103, E104 and A107, while F196 positioned the aromatic ring against this surface via a π-stacking interaction. The proximity of G103 and F176 to the para substituent of the substrate aromatic ring and the structure of G103L T4moHD suggest how changes in regiospecificity arise from mutations at G103. Although effector protein binding produced significant shifts in the positions of residues along the outer portion of the active site (T201, N202, and Q228) and in some iron ligands (E231 and E197), surprisingly minor shifts (<1 Å) were produced in F176, F196, and other interior residues of the active site. Likewise, products bound to the diiron center in either the presence or absence of effector protein did not significantly shift the position of the interior residues, suggesting that positioning of the cognate substrates will not be strongly influenced by effector protein binding. Thus, changes in product distributions in the absence of the effector protein are proposed to arise from differences in rates of chemical steps of the reaction relative to motion of substrates within the active site channel of the uncomplexed, less efficient enzyme, while structural changes in diiron ligand geometry associated with cycling between diferrous and diferric states are discussed for their potential contribution to product release.

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Year:  2012        PMID: 22264099     DOI: 10.1021/bi2018333

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

1.  In-crystal reaction cycle of a toluene-bound diiron hydroxylase.

Authors:  Justin F Acheson; Lucas J Bailey; Thomas C Brunold; Brian G Fox
Journal:  Nature       Date:  2017-03-27       Impact factor: 49.962

2.  MhpA Is a Hydroxylase Catalyzing the Initial Reaction of 3-(3-Hydroxyphenyl)Propionate Catabolism in Escherichia coli K-12.

Authors:  Ying Xu; Ning-Yi Zhou
Journal:  Appl Environ Microbiol       Date:  2020-02-03       Impact factor: 4.792

3.  Mechanism for Six-Electron Aryl-N-Oxygenation by the Non-Heme Diiron Enzyme CmlI.

Authors:  Anna J Komor; Brent S Rivard; Ruixi Fan; Yisong Guo; Lawrence Que; John D Lipscomb
Journal:  J Am Chem Soc       Date:  2016-06-03       Impact factor: 15.419

4.  Single Turnover Reveals Oxygenated Intermediates in Toluene/o-Xylene Monooxygenase in the Presence of the Native Redox Partners.

Authors:  Alexandria Deliz Liang; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2015-08-12       Impact factor: 15.419

Review 5.  Engineering non-heme mono- and dioxygenases for biocatalysis.

Authors:  Adi Dror; Ayelet Fishman
Journal:  Comput Struct Biotechnol J       Date:  2012-10-23       Impact factor: 7.271

6.  Component interactions and electron transfer in toluene/o-xylene monooxygenase.

Authors:  Alexandria Deliz Liang; Stephen J Lippard
Journal:  Biochemistry       Date:  2014-11-17       Impact factor: 3.162

7.  A flexible glutamine regulates the catalytic activity of toluene o-xylene monooxygenase.

Authors:  Alexandria Deliz Liang; Alexandra T Wrobel; Stephen J Lippard
Journal:  Biochemistry       Date:  2014-05-29       Impact factor: 3.162

8.  Structural basis for biomolecular recognition in overlapping binding sites in a diiron enzyme system.

Authors:  Justin F Acheson; Lucas J Bailey; Nathaniel L Elsen; Brian G Fox
Journal:  Nat Commun       Date:  2014-09-24       Impact factor: 14.919

  8 in total

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