Literature DB >> 22262511

Roles of tRNA in cell wall biosynthesis.

Kiley Dare1, Michael Ibba.   

Abstract

Recent research into various aspects of bacterial metabolism such as cell wall and antibiotic synthesis, degradation pathways, cellular stress, and amino acid biosynthesis has elucidated roles of aminoacyl-transfer ribonucleic acid (aa-tRNA) outside of translation. Although the two enzyme families responsible for cell wall modifications, aminoacyl-phosphatidylglycerol synthases (aaPGSs) and Fem, were discovered some time ago, they have recently become of intense interest for their roles in the antimicrobial resistance of pathogenic microorganisms. The addition of positively charged amino acids to phosphatidylglycerol (PG) by aaPGSs neutralizes the lipid bilayer making the bacteria less susceptible to positively charged antimicrobial agents. Fem transferases utilize aa-tRNA to form peptide bridges that link strands of peptidoglycan. These bridges vary among the bacterial species in which they are present and play a role in resistance to antibiotics that target the cell wall. Additionally, the formation of truncated peptides results in shorter peptide bridges and loss of branched linkages which makes bacteria more susceptible to antimicrobials. A greater understanding of the structure and substrate specificity of this diverse enzymatic family is necessary to aid current efforts in designing potential bactericidal agents. These two enzyme families are linked only by the substrate with which they modify the cell wall, aa-tRNA; their structure, cell wall modification processes and the physiological changes they impart on the bacterium differ greatly.
Copyright © 2012 John Wiley & Sons, Ltd.

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Year:  2012        PMID: 22262511      PMCID: PMC3873719          DOI: 10.1002/wrna.1108

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  130 in total

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8.  VirR, a response regulator critical for Listeria monocytogenes virulence.

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9.  The bacterial defensin resistance protein MprF consists of separable domains for lipid lysinylation and antimicrobial peptide repulsion.

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10.  The two-domain LysX protein of Mycobacterium tuberculosis is required for production of lysinylated phosphatidylglycerol and resistance to cationic antimicrobial peptides.

Authors:  Erin Maloney; Dorota Stankowska; Jian Zhang; Marek Fol; Qi-Jian Cheng; Shichun Lun; William R Bishai; Malini Rajagopalan; Delphi Chatterjee; Murty V Madiraju
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  24 in total

Review 1.  Non-canonical roles of tRNAs and tRNA mimics in bacterial cell biology.

Authors:  Assaf Katz; Sara Elgamal; Andrei Rajkovic; Michael Ibba
Journal:  Mol Microbiol       Date:  2016-06-28       Impact factor: 3.501

Review 2.  Bacterial transfer RNAs.

Authors:  Jennifer Shepherd; Michael Ibba
Journal:  FEMS Microbiol Rev       Date:  2015-03-21       Impact factor: 16.408

Review 3.  Direction of aminoacylated transfer RNAs into antibiotic synthesis and peptidoglycan-mediated antibiotic resistance.

Authors:  Jennifer Shepherd; Michael Ibba
Journal:  FEBS Lett       Date:  2013-07-29       Impact factor: 4.124

Review 4.  Cameo appearances of aminoacyl-tRNA in natural product biosynthesis.

Authors:  Emily C Ulrich; Wilfred A van der Donk
Journal:  Curr Opin Chem Biol       Date:  2016-09-04       Impact factor: 8.822

5.  Black raspberry extract shifted gut microbe diversity and their metabolic landscape in a human colonic model.

Authors:  Shiqi Zhang; Mengyang Xu; Xiaowei Sun; Xuyu Liu; Fouad Choueiry; Rui Xu; Haifei Shi; Jiangjiang Zhu
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2021-11-17       Impact factor: 3.205

6.  Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates.

Authors:  Bong Heon Kim; Min Kyung Kim; Sun Joo Oh; Kha The Nguyen; Jun Hoe Kim; Alexander Varshavsky; Cheol-Sang Hwang; Hyun Kyu Song
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-25       Impact factor: 12.779

Review 7.  Small-Molecule Acetylation by GCN5-Related N-Acetyltransferases in Bacteria.

Authors:  Rachel M Burckhardt; Jorge C Escalante-Semerena
Journal:  Microbiol Mol Biol Rev       Date:  2020-04-15       Impact factor: 11.056

Review 8.  Controlling translation via modulation of tRNA levels.

Authors:  Jeremy E Wilusz
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-04-28       Impact factor: 9.957

Review 9.  β-Lactam Resistance Mechanisms: Gram-Positive Bacteria and Mycobacterium tuberculosis.

Authors:  Jed F Fisher; Shahriar Mobashery
Journal:  Cold Spring Harb Perspect Med       Date:  2016-05-02       Impact factor: 6.915

Review 10.  Bacterial GCN5-Related N-Acetyltransferases: From Resistance to Regulation.

Authors:  Lorenza Favrot; John S Blanchard; Olivia Vergnolle
Journal:  Biochemistry       Date:  2016-02-09       Impact factor: 3.162

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