Literature DB >> 22261046

Activated STAT1 transcription factors conduct distinct saltatory movements in the cell nucleus.

Jasmin Speil1, Eugen Baumgart, Jan-Peter Siebrasse, Roman Veith, Uwe Vinkemeier, Ulrich Kubitscheck.   

Abstract

The activation of STAT transcription factors is a critical determinant of their subcellular distribution and their ability to regulate gene expression. Yet, it is not known how activation affects the behavior of individual STAT molecules in the cytoplasm and nucleus. To investigate this issue, we injected fluorescently labeled STAT1 in living HeLa cells and traced them by single-molecule microscopy. We determined that STAT1 moved stochastically in the cytoplasm and nucleus with very short residence times (<0.03 s) before activation. Upon activation, STAT1 mobility in the cytoplasm decreased ∼2.5-fold, indicating reduced movement of STAT1/importinα/β complexes to the nucleus. In the nucleus, activated STAT1 displayed a distinct saltatory mobility, with residence times of up to 5 s and intermittent diffusive motion. In this manner, activated STAT1 factors can occupy their putative chromatin target sites within ∼2 s. These results provide a better understanding of the timescales on which cellular signaling and regulated gene transcription operate at the single-molecule level.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22261046      PMCID: PMC3297778          DOI: 10.1016/j.bpj.2011.10.006

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  38 in total

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Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

3.  Probing transcription factor dynamics at the single-molecule level in a living cell.

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Journal:  Science       Date:  2007-05-25       Impact factor: 47.728

Review 4.  Single molecule approaches to transcription factor kinetics in living cells.

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5.  Single ovalbumin molecules exploring nucleoplasm and nucleoli of living cell nuclei.

Authors:  Jasmin Speil; Ulrich Kubitscheck
Journal:  Biochim Biophys Acta       Date:  2009-11-04

6.  DNA binding of in vitro activated Stat1 alpha, Stat1 beta and truncated Stat1: interaction between NH2-terminal domains stabilizes binding of two dimers to tandem DNA sites.

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9.  Probing intranuclear environments at the single-molecule level.

Authors:  David Grünwald; Robert M Martin; Volker Buschmann; David P Bazett-Jones; Heinrich Leonhardt; Ulrich Kubitscheck; M Cristina Cardoso
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

10.  Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing.

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Journal:  Nat Methods       Date:  2007-06-11       Impact factor: 28.547

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  35 in total

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Journal:  Bioessays       Date:  2016-09-16       Impact factor: 4.345

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Authors:  Diana A Stavreva; David A Garcia; Gregory Fettweis; Prabhakar R Gudla; George F Zaki; Vikas Soni; Andrew McGowan; Geneva Williams; Anh Huynh; Murali Palangat; R Louis Schiltz; Thomas A Johnson; Diego M Presman; Matthew L Ferguson; Gianluca Pegoraro; Arpita Upadhyaya; Gordon L Hager
Journal:  Mol Cell       Date:  2019-08-14       Impact factor: 17.970

3.  Quantifying transcription factor-DNA binding in single cells in vivo with photoactivatable fluorescence correlation spectroscopy.

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4.  Quantifying transcription factor binding dynamics at the single-molecule level in live cells.

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Journal:  Methods       Date:  2017-03-15       Impact factor: 3.608

5.  Single-molecule tracking in live cells reveals distinct target-search strategies of transcription factors in the nucleus.

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Journal:  Elife       Date:  2014-06-12       Impact factor: 8.140

6.  Studying the Dynamics of Chromatin-Binding Proteins in Mammalian Cells Using Single-Molecule Localization Microscopy.

Authors:  Maike Steindel; Igor Orsine de Almeida; Stanley Strawbridge; Valentyna Chernova; David Holcman; Aleks Ponjavic; Srinjan Basu
Journal:  Methods Mol Biol       Date:  2022

Review 7.  A matter of time - How transient transcription factor interactions create dynamic gene regulatory networks.

Authors:  Joseph Swift; Gloria M Coruzzi
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Authors:  Andreas Begitt; Mathias Droescher; Thomas Meyer; Christoph D Schmid; Michelle Baker; Filipa Antunes; Klaus-Peter Knobeloch; Markus R Owen; Ronald Naumann; Thomas Decker; Uwe Vinkemeier
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9.  Integrated requirement of non-specific and sequence-specific DNA binding in Myc-driven transcription.

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Journal:  EMBO J       Date:  2021-04-01       Impact factor: 11.598

10.  Estimating binding properties of transcription factors from genome-wide binding profiles.

Authors:  Nicolae Radu Zabet; Boris Adryan
Journal:  Nucleic Acids Res       Date:  2014-11-28       Impact factor: 16.971

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