| Literature DB >> 22259576 |
S Samshuddin, Ray J Butcher, Sema Ozturk Yıldırım, Mehmet Akkurt, B Narayana, H S Yathirajan.
Abstract
In the title compound, C(11)H(13)N(3)O, the phenyl ring is disordered over two sites, with occupancy factors in a 0.520 (17):0.480 (17) ratio. The dihedral angle between the ring planes of the major and minor components of the disordered ring is 12.9 (2)°. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, forming R(2) (2)(8) ring motifs. C-H⋯O, C-H⋯N and C-H⋯π inter-actions also occur.Entities:
Year: 2011 PMID: 22259576 PMCID: PMC3254430 DOI: 10.1107/S160053681105255X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H13N3O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 5469 reflections |
| θ = 3.0–30.9° | |
| µ = 0.07 mm−1 | |
| β = 109.908 (6)° | Prism, colourless |
| 0.40 × 0.30 × 0.18 mm | |
| Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 3528 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 2748 reflections with |
| graphite | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 30.9°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 12712 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3528 reflections | (Δ/σ)max < 0.001 |
| 168 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| Occ. (<1) | |||||
| O1 | 0.36888 (6) | 0.23438 (4) | 1.62948 (12) | 0.0323 (3) | |
| N1 | 0.34428 (7) | 0.30220 (5) | 1.17621 (15) | 0.0337 (3) | |
| N2 | 0.31934 (7) | 0.27704 (4) | 1.32596 (14) | 0.0310 (3) | |
| N3 | 0.47771 (7) | 0.26174 (6) | 1.49376 (16) | 0.0458 (4) | |
| C1B | 0.3063 (5) | 0.40506 (19) | 0.5724 (7) | 0.0301 (9) | 0.520 (17) |
| C2B | 0.2428 (5) | 0.4316 (2) | 0.4074 (6) | 0.0354 (10) | 0.520 (17) |
| C3B | 0.2747 (6) | 0.45824 (19) | 0.2685 (6) | 0.0405 (13) | 0.520 (17) |
| C4B | 0.3701 (6) | 0.45829 (14) | 0.2947 (8) | 0.0409 (13) | 0.520 (17) |
| C5B | 0.4336 (6) | 0.4317 (2) | 0.4598 (11) | 0.0469 (14) | 0.520 (17) |
| C6B | 0.4017 (5) | 0.4051 (2) | 0.5986 (11) | 0.0434 (11) | 0.520 (17) |
| C7 | 0.25908 (11) | 0.37670 (5) | 0.71144 (19) | 0.0393 (4) | |
| C8 | 0.31231 (10) | 0.35103 (5) | 0.87866 (19) | 0.0375 (4) | |
| C9 | 0.27918 (9) | 0.32596 (5) | 1.03065 (18) | 0.0327 (3) | |
| C10 | 0.17796 (10) | 0.32953 (6) | 1.0129 (2) | 0.0395 (4) | |
| C11 | 0.38883 (8) | 0.25686 (5) | 1.49014 (17) | 0.0304 (3) | |
| C3A | 0.2443 (5) | 0.4630 (2) | 0.2639 (7) | 0.0458 (13) | 0.480 (17) |
| C4A | 0.3345 (6) | 0.45553 (15) | 0.2576 (7) | 0.0378 (13) | 0.480 (17) |
| C5A | 0.3972 (6) | 0.4208 (2) | 0.3956 (10) | 0.0408 (14) | 0.480 (17) |
| C6A | 0.3697 (5) | 0.39363 (19) | 0.5398 (9) | 0.0337 (11) | 0.480 (17) |
| C2A | 0.2169 (4) | 0.4358 (2) | 0.4081 (7) | 0.0402 (11) | 0.480 (17) |
| C1A | 0.2795 (4) | 0.40110 (19) | 0.5461 (6) | 0.0276 (10) | 0.480 (17) |
| H7A | 0.19470 | 0.37930 | 0.69980 | 0.0470* | |
| H3BA | 0.23130 | 0.47640 | 0.15570 | 0.0490* | 0.520 (17) |
| H5BA | 0.49890 | 0.43180 | 0.47770 | 0.0560* | 0.520 (17) |
| H6BA | 0.44510 | 0.38700 | 0.71150 | 0.0520* | 0.520 (17) |
| H10A | 0.17330 | 0.33360 | 1.14770 | 0.0590* | |
| H10B | 0.14520 | 0.29610 | 0.94940 | 0.0590* | |
| H10C | 0.14890 | 0.36120 | 0.92980 | 0.0590* | |
| H4BA | 0.39200 | 0.47650 | 0.19980 | 0.0490* | 0.520 (17) |
| H8A | 0.37790 | 0.34890 | 0.90100 | 0.0450* | |
| H2B | 0.25980 | 0.27410 | 1.31570 | 0.0370* | |
| H3B | 0.52440 | 0.24890 | 1.59690 | 0.0550* | |
| H3C | 0.48940 | 0.27780 | 1.39300 | 0.0550* | |
| H2BA | 0.17760 | 0.43160 | 0.38950 | 0.0420* | 0.520 (17) |
| H2AA | 0.15520 | 0.44090 | 0.41240 | 0.0480* | 0.480 (17) |
| H3AA | 0.20150 | 0.48670 | 0.16960 | 0.0550* | 0.480 (17) |
| H4AA | 0.35330 | 0.47410 | 0.15910 | 0.0450* | 0.480 (17) |
| H5AA | 0.45880 | 0.41570 | 0.39130 | 0.0490* | 0.480 (17) |
| H6AA | 0.41250 | 0.36990 | 0.63410 | 0.0400* | 0.480 (17) |
| O1 | 0.0234 (4) | 0.0505 (6) | 0.0224 (4) | 0.0004 (3) | 0.0069 (3) | 0.0096 (3) |
| N1 | 0.0334 (5) | 0.0409 (6) | 0.0276 (5) | −0.0035 (4) | 0.0113 (4) | 0.0100 (4) |
| N2 | 0.0239 (4) | 0.0438 (6) | 0.0243 (5) | −0.0019 (4) | 0.0069 (4) | 0.0107 (4) |
| N3 | 0.0224 (5) | 0.0857 (10) | 0.0292 (5) | −0.0024 (5) | 0.0086 (4) | 0.0155 (5) |
| C1B | 0.045 (2) | 0.0227 (15) | 0.0208 (13) | 0.0012 (14) | 0.0088 (15) | 0.0032 (10) |
| C2B | 0.045 (2) | 0.0379 (17) | 0.0259 (14) | 0.0056 (16) | 0.0156 (14) | 0.0043 (11) |
| C3B | 0.059 (3) | 0.0386 (18) | 0.0276 (14) | 0.0065 (18) | 0.0197 (17) | 0.0131 (11) |
| C4B | 0.065 (3) | 0.0320 (15) | 0.0343 (18) | −0.0086 (16) | 0.028 (2) | 0.0002 (13) |
| C5B | 0.055 (3) | 0.0457 (19) | 0.050 (2) | −0.0018 (19) | 0.031 (2) | 0.0083 (17) |
| C6B | 0.046 (2) | 0.0458 (19) | 0.041 (2) | 0.0010 (18) | 0.0182 (19) | 0.0113 (17) |
| C7 | 0.0638 (9) | 0.0303 (6) | 0.0298 (6) | 0.0083 (6) | 0.0238 (6) | 0.0061 (5) |
| C8 | 0.0488 (7) | 0.0349 (6) | 0.0335 (6) | 0.0037 (5) | 0.0202 (6) | 0.0097 (5) |
| C9 | 0.0389 (6) | 0.0323 (6) | 0.0279 (5) | 0.0005 (5) | 0.0126 (5) | 0.0065 (4) |
| C10 | 0.0397 (7) | 0.0478 (8) | 0.0320 (6) | 0.0081 (5) | 0.0135 (5) | 0.0127 (5) |
| C11 | 0.0240 (5) | 0.0424 (7) | 0.0238 (5) | −0.0017 (4) | 0.0067 (4) | 0.0040 (4) |
| C3A | 0.056 (3) | 0.044 (2) | 0.0397 (18) | 0.0139 (18) | 0.0194 (18) | 0.0134 (14) |
| C4A | 0.055 (3) | 0.0314 (17) | 0.0291 (15) | −0.0016 (18) | 0.017 (2) | 0.0062 (12) |
| C5A | 0.045 (3) | 0.0402 (19) | 0.044 (2) | 0.0033 (16) | 0.024 (2) | 0.0081 (16) |
| C6A | 0.038 (2) | 0.0309 (16) | 0.0338 (19) | 0.0064 (14) | 0.0144 (18) | 0.0112 (13) |
| C2A | 0.053 (2) | 0.0369 (19) | 0.0353 (17) | 0.0087 (17) | 0.0212 (16) | 0.0099 (13) |
| C1A | 0.038 (2) | 0.0219 (14) | 0.0268 (15) | −0.0032 (14) | 0.0161 (14) | −0.0043 (12) |
| O1—C11 | 1.2472 (15) | C5A—C6A | 1.389 (10) |
| N1—N2 | 1.3788 (15) | C5B—C6B | 1.389 (10) |
| N1—C9 | 1.2915 (17) | C7—C8 | 1.3344 (18) |
| N2—C11 | 1.3618 (15) | C8—C9 | 1.4610 (19) |
| N3—C11 | 1.3398 (17) | C9—C10 | 1.494 (2) |
| N2—H2B | 0.8800 | C2A—H2AA | 0.9500 |
| N3—H3B | 0.8800 | C2B—H2BA | 0.9500 |
| N3—H3C | 0.8800 | C3A—H3AA | 0.9500 |
| C1A—C7 | 1.432 (5) | C3B—H3BA | 0.9500 |
| C1A—C6A | 1.391 (10) | C4A—H4AA | 0.9500 |
| C1A—C2A | 1.390 (7) | C4B—H4BA | 0.9500 |
| C1B—C2B | 1.390 (7) | C5A—H5AA | 0.9500 |
| C1B—C6B | 1.390 (11) | C5B—H5BA | 0.9500 |
| C1B—C7 | 1.556 (6) | C6A—H6AA | 0.9500 |
| C2A—C3A | 1.389 (8) | C6B—H6BA | 0.9500 |
| C2B—C3B | 1.390 (9) | C7—H7A | 0.9500 |
| C3A—C4A | 1.391 (12) | C8—H8A | 0.9500 |
| C3B—C4B | 1.390 (13) | C10—H10B | 0.9800 |
| C4A—C5A | 1.391 (9) | C10—H10C | 0.9800 |
| C4B—C5B | 1.391 (9) | C10—H10A | 0.9800 |
| N2—N1—C9 | 118.31 (11) | C3A—C2A—H2AA | 120.00 |
| N1—N2—C11 | 118.53 (11) | C1A—C2A—H2AA | 120.00 |
| N1—N2—H2B | 121.00 | C3B—C2B—H2BA | 120.00 |
| C11—N2—H2B | 121.00 | C1B—C2B—H2BA | 120.00 |
| C11—N3—H3B | 120.00 | C4A—C3A—H3AA | 120.00 |
| H3B—N3—H3C | 120.00 | C2A—C3A—H3AA | 120.00 |
| C11—N3—H3C | 120.00 | C4B—C3B—H3BA | 120.00 |
| C6A—C1A—C7 | 117.1 (4) | C2B—C3B—H3BA | 120.00 |
| C2A—C1A—C7 | 122.6 (5) | C5A—C4A—H4AA | 120.00 |
| C2A—C1A—C6A | 119.9 (5) | C3A—C4A—H4AA | 120.00 |
| C2B—C1B—C7 | 113.5 (6) | C5B—C4B—H4BA | 120.00 |
| C2B—C1B—C6B | 120.0 (6) | C3B—C4B—H4BA | 120.00 |
| C6B—C1B—C7 | 126.4 (5) | C4A—C5A—H5AA | 120.00 |
| C1A—C2A—C3A | 120.1 (6) | C6A—C5A—H5AA | 120.00 |
| C1B—C2B—C3B | 120.0 (7) | C4B—C5B—H5BA | 120.00 |
| C2A—C3A—C4A | 120.0 (5) | C6B—C5B—H5BA | 120.00 |
| C2B—C3B—C4B | 120.0 (5) | C5A—C6A—H6AA | 120.00 |
| C3A—C4A—C5A | 120.0 (6) | C1A—C6A—H6AA | 120.00 |
| C3B—C4B—C5B | 120.0 (6) | C5B—C6B—H6BA | 120.00 |
| C4A—C5A—C6A | 120.0 (8) | C1B—C6B—H6BA | 120.00 |
| C4B—C5B—C6B | 120.0 (8) | C1A—C7—H7A | 114.00 |
| C1A—C6A—C5A | 120.0 (6) | C1B—C7—H7A | 126.00 |
| C1B—C6B—C5B | 120.0 (6) | C8—C7—H7A | 114.00 |
| C1B—C7—C8 | 119.7 (3) | C9—C8—H8A | 117.00 |
| C1A—C7—C8 | 132.9 (3) | C7—C8—H8A | 117.00 |
| C7—C8—C9 | 126.08 (15) | C9—C10—H10C | 110.00 |
| N1—C9—C8 | 114.27 (13) | C9—C10—H10B | 109.00 |
| C8—C9—C10 | 120.69 (11) | H10B—C10—H10C | 109.00 |
| N1—C9—C10 | 125.04 (12) | H10A—C10—H10B | 110.00 |
| N2—C11—N3 | 117.53 (11) | H10A—C10—H10C | 109.00 |
| O1—C11—N3 | 122.23 (11) | C9—C10—H10A | 110.00 |
| O1—C11—N2 | 120.24 (12) | ||
| C9—N1—N2—C11 | −173.34 (11) | C2B—C1B—C7—C8 | −178.1 (3) |
| N2—N1—C9—C8 | −179.53 (10) | C6B—C1B—C7—C8 | 2.8 (6) |
| N2—N1—C9—C10 | 1.37 (19) | C1B—C2B—C3B—C4B | 0.0 (7) |
| N1—N2—C11—O1 | 179.22 (11) | C2B—C3B—C4B—C5B | 0.0 (7) |
| N1—N2—C11—N3 | −1.40 (17) | C3B—C4B—C5B—C6B | 0.0 (8) |
| C6B—C1B—C2B—C3B | 0.0 (7) | C4B—C5B—C6B—C1B | 0.0 (8) |
| C7—C1B—C2B—C3B | −179.2 (4) | C1B—C7—C8—C9 | 175.5 (2) |
| C2B—C1B—C6B—C5B | 0.0 (8) | C7—C8—C9—N1 | 178.13 (13) |
| C7—C1B—C6B—C5B | 179.1 (4) | C7—C8—C9—C10 | −2.7 (2) |
| Cg1 and Cg2 are the centroids of the disordered benzene rings C1A –C6A and C1B–C6B, respectively. |
| H··· | ||||
| N2—H2B···O1i | 0.88 | 2.12 | 2.9785 (15) | 166 |
| N3—H3B···O1ii | 0.88 | 2.08 | 2.9434 (14) | 168 |
| N3—H3C···N1 | 0.88 | 2.28 | 2.6397 (16) | 104 |
| C10—H10A···O1i | 0.98 | 2.51 | 3.2384 (17) | 131 |
| C10—H10B···N1iii | 0.98 | 2.58 | 3.4566 (19) | 148 |
| C4B—H4BA···Cg1iv | 0.95 | 2.86 | 3.618 (5) | 138 |
| C4A—H4AA···Cg1iv | 0.95 | 2.76 | 3.590 (5) | 146 |
| C4A—H4AA···Cg2iv | 0.95 | 2.93 | 3.714 (5) | 141 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the disordered benzene rings C1A –C6A and C1B–C6B, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.88 | 2.12 | 2.9785 (15) | 166 |
| N3—H3 | 0.88 | 2.08 | 2.9434 (14) | 168 |
| C10—H10 | 0.98 | 2.51 | 3.2384 (17) | 131 |
| C10—H10 | 0.98 | 2.58 | 3.4566 (19) | 148 |
| C4 | 0.95 | 2.86 | 3.618 (5) | 138 |
| C4 | 0.95 | 2.76 | 3.590 (5) | 146 |
| C4 | 0.95 | 2.93 | 3.714 (5) | 141 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .