| Literature DB >> 22259542 |
Man-Hua Wu, Qi-Ming Qiu, Sen Gao, Qiong-Hua Jin, Cun-Lin Zhang.
Abstract
In the crystal structure of the title compound, C(5)H(8)N(4), adjacent mol-ecules are connected through N-H⋯NEntities:
Year: 2011 PMID: 22259542 PMCID: PMC3254400 DOI: 10.1107/S1600536811051920
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H8N4 | |
| Mo | |
| Orthorhombic, | Cell parameters from 1029 reflections |
| θ = 2.7–28.0° | |
| µ = 0.08 mm−1 | |
| Block, yellow | |
| 0.50 × 0.39 × 0.38 mm | |
| Bruker SMART CCD area-detector diffractometer | 614 independent reflections |
| Radiation source: fine-focus sealed tube | 421 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.0°, θmin = 3.2° |
| Absorption correction: multi-scan ( | |
| 2997 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 614 reflections | (Δ/σ)max < 0.001 |
| 58 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | 1.0561 (4) | 0.2500 | 0.5062 (2) | 0.0514 (9) | |
| N2 | 1.0506 (4) | 0.2500 | 0.6123 (2) | 0.0499 (8) | |
| N3 | 0.7314 (4) | 0.2500 | 0.60746 (19) | 0.0466 (8) | |
| N4 | 0.8858 (4) | 0.2500 | 0.7657 (2) | 0.0609 (10) | |
| H4A | 0.9838 | 0.2500 | 0.8011 | 0.073* | |
| H4B | 0.7850 | 0.2500 | 0.7982 | 0.073* | |
| C1 | 0.8903 (4) | 0.2500 | 0.6589 (2) | 0.0447 (9) | |
| C2 | 0.7407 (5) | 0.2500 | 0.5030 (2) | 0.0469 (9) | |
| C3 | 0.9072 (5) | 0.2500 | 0.4511 (2) | 0.0477 (9) | |
| C4 | 0.5682 (5) | 0.2500 | 0.4422 (3) | 0.0678 (12) | |
| H4C | 0.5720 | 0.3512 | 0.3890 | 0.102* | 0.50 |
| H4D | 0.4708 | 0.2755 | 0.4896 | 0.102* | 0.50 |
| H4E | 0.5516 | 0.1233 | 0.4093 | 0.102* | 0.50 |
| C5 | 0.9233 (5) | 0.2500 | 0.3332 (2) | 0.0624 (11) | |
| H5A | 0.8506 | 0.1461 | 0.3044 | 0.094* | 0.50 |
| H5B | 1.0456 | 0.2286 | 0.3137 | 0.094* | 0.50 |
| H5C | 0.8839 | 0.3753 | 0.3060 | 0.094* | 0.50 |
| N1 | 0.0485 (19) | 0.063 (2) | 0.0425 (16) | 0.000 | 0.0087 (13) | 0.000 |
| N2 | 0.0412 (17) | 0.069 (2) | 0.0395 (16) | 0.000 | 0.0016 (12) | 0.000 |
| N3 | 0.0431 (16) | 0.062 (2) | 0.0346 (15) | 0.000 | −0.0012 (11) | 0.000 |
| N4 | 0.0382 (16) | 0.105 (3) | 0.0391 (16) | 0.000 | −0.0064 (12) | 0.000 |
| C1 | 0.0417 (19) | 0.057 (2) | 0.0350 (17) | 0.000 | −0.0008 (13) | 0.000 |
| C2 | 0.054 (2) | 0.050 (2) | 0.0374 (19) | 0.000 | −0.0014 (14) | 0.000 |
| C3 | 0.055 (2) | 0.049 (2) | 0.0397 (19) | 0.000 | 0.0031 (16) | 0.000 |
| C4 | 0.060 (2) | 0.097 (3) | 0.047 (2) | 0.000 | −0.0118 (17) | 0.000 |
| C5 | 0.075 (3) | 0.074 (3) | 0.0376 (19) | 0.000 | 0.0075 (18) | 0.000 |
| N1—C3 | 1.315 (4) | C2—C4 | 1.503 (5) |
| N1—N2 | 1.344 (4) | C3—C5 | 1.498 (4) |
| N2—C1 | 1.338 (4) | C4—H4C | 0.9600 |
| N3—C2 | 1.325 (4) | C4—H4D | 0.9600 |
| N3—C1 | 1.356 (4) | C4—H4E | 0.9600 |
| N4—C1 | 1.353 (4) | C5—H5A | 0.9600 |
| N4—H4A | 0.8600 | C5—H5B | 0.9600 |
| N4—H4B | 0.8600 | C5—H5C | 0.9600 |
| C2—C3 | 1.409 (5) | ||
| C3—N1—N2 | 120.2 (3) | C2—C3—C5 | 122.4 (3) |
| C1—N2—N1 | 117.9 (3) | C2—C4—H4C | 109.5 |
| C2—N3—C1 | 115.7 (3) | C2—C4—H4D | 109.5 |
| C1—N4—H4A | 120.0 | H4C—C4—H4D | 109.5 |
| C1—N4—H4B | 120.0 | C2—C4—H4E | 109.5 |
| H4A—N4—H4B | 120.0 | H4C—C4—H4E | 109.5 |
| N2—C1—N4 | 117.6 (3) | H4D—C4—H4E | 109.5 |
| N2—C1—N3 | 125.2 (3) | C3—C5—H5A | 109.5 |
| N4—C1—N3 | 117.3 (3) | C3—C5—H5B | 109.5 |
| N3—C2—C3 | 120.8 (3) | H5A—C5—H5B | 109.5 |
| N3—C2—C4 | 117.7 (3) | C3—C5—H5C | 109.5 |
| C3—C2—C4 | 121.5 (3) | H5A—C5—H5C | 109.5 |
| N1—C3—C2 | 120.2 (3) | H5B—C5—H5C | 109.5 |
| N1—C3—C5 | 117.4 (3) | ||
| C3—N1—N2—C1 | 0.0 | N2—N1—C3—C2 | 0.0 |
| N1—N2—C1—N4 | 180.0 | N2—N1—C3—C5 | 180.0 |
| N1—N2—C1—N3 | 0.000 (1) | N3—C2—C3—N1 | 0.0 |
| C2—N3—C1—N2 | 0.000 (1) | C4—C2—C3—N1 | 180.0 |
| C2—N3—C1—N4 | 180.0 | N3—C2—C3—C5 | 180.0 |
| C1—N3—C2—C3 | 0.0 | C4—C2—C3—C5 | 0.0 |
| C1—N3—C2—C4 | 180.0 |
| H··· | ||||
| N4—H4A···N3i | 0.86 | 2.19 | 3.045 (4) | 179. |
| N4—H4B···N2ii | 0.86 | 2.09 | 2.947 (4) | 176. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.86 | 2.19 | 3.045 (4) | 179 |
| N4—H4 | 0.86 | 2.09 | 2.947 (4) | 176 |
Symmetry codes: (i) ; (ii) .