| Literature DB >> 22259474 |
Andreas Lemmerer, Joel Bernstein, Volker Kahlenberg.
Abstract
The crystal structure of the title co-crystal, 2C(6)H(7)N(3)O·C(6)H(10)O(4), is a second polymorph, designated form II, of the co-crystal formed between the two mol-ecules [Lemmerer et al. (2011 ▶). CrystEngComm, 13, 55-59]. The asymmetric unit comprises one mol-ecule of nicotinic acid hydrazide, and one half-mol-ecule of adipic acid (the entire mol-ecule is completed by the application of a centre of inversion). In the crystal, mol-ecules assemble into a three-dimensional network of hydrogen bonds, formed by three N-H⋯O hydrogen bonds and one O-H⋯N hydrogen bond. The O-H⋯N hydrogen bond formed between the carboxyl group and the pyridine ring is supported by a C-H⋯O hydrogen bond.Entities:
Year: 2011 PMID: 22259474 PMCID: PMC3254528 DOI: 10.1107/S1600536811054043
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 2C6H7N3O·C6H10O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3572 reflections |
| θ = 3.1–28.5° | |
| µ = 0.11 mm−1 | |
| β = 103.729 (3)° | Block, colourless |
| 0.32 × 0.28 × 0.04 mm | |
| Oxford Diffraction Xcalibur diffractometer with a Ruby (Gemini ultra Mo) detector | 1487 reflections with |
| ω scans | |
| Absorption correction: multi-scan ( | θmax = 25.5°, θmin = 3.1° |
| 6207 measured reflections | |
| 1845 independent reflections |
| Refinement on | H atoms treated by a mixture of independent and constrained refinement |
| Least-squares matrix: full | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.18 e Å−3 | |
| Δρmin = −0.14 e Å−3 | |
| 1845 reflections | Extinction correction: |
| 153 parameters | Extinction coefficient: 0.0095 (18) |
| 0 restraints |
| Experimental. Absorption corrections were made using the program Crysalis Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm in CrysAlisPro. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| C1 | 0.16016 (7) | 0.37907 (15) | 0.35826 (13) | 0.0237 (3) | |
| C2 | 0.22411 (7) | 0.44813 (15) | 0.47997 (13) | 0.0248 (3) | |
| H2A | 0.2294 | 0.5767 | 0.4922 | 0.03* | |
| C3 | 0.27134 (8) | 0.16066 (15) | 0.56223 (15) | 0.0296 (3) | |
| H3 | 0.3105 | 0.0841 | 0.6326 | 0.036* | |
| C4 | 0.20920 (8) | 0.08110 (15) | 0.44526 (15) | 0.0317 (3) | |
| H4 | 0.2056 | −0.0479 | 0.4355 | 0.038* | |
| C5 | 0.15231 (8) | 0.19064 (16) | 0.34265 (14) | 0.0291 (3) | |
| H5 | 0.1082 | 0.1384 | 0.2622 | 0.035* | |
| C6 | 0.09817 (8) | 0.49832 (15) | 0.24735 (13) | 0.0243 (3) | |
| N1 | 0.13026 (7) | 0.65323 (12) | 0.20370 (11) | 0.0259 (2) | |
| H1 | 0.1859 (9) | 0.6738 (17) | 0.2300 (15) | 0.030 (3)* | |
| N2 | 0.27881 (6) | 0.34156 (13) | 0.58100 (11) | 0.0276 (3) | |
| N3 | 0.07997 (7) | 0.77311 (15) | 0.09121 (13) | 0.0303 (3) | |
| H3A | 0.0389 (9) | 0.8250 (17) | 0.1382 (16) | 0.036 (4)* | |
| H3B | 0.0508 (9) | 0.7022 (19) | 0.0145 (18) | 0.042 (4)* | |
| O1 | 0.02225 (5) | 0.45309 (11) | 0.19861 (10) | 0.0327 (2) | |
| C7 | 0.38377 (7) | 0.67377 (15) | 0.82289 (13) | 0.0259 (3) | |
| C8 | 0.45756 (8) | 0.75709 (16) | 0.94010 (16) | 0.0352 (3) | |
| H8A | 0.5119 | 0.7085 | 0.9206 | 0.042* | |
| H8B | 0.4543 | 0.7172 | 1.0467 | 0.042* | |
| C9 | 0.46178 (7) | 0.96301 (15) | 0.93861 (14) | 0.0281 (3) | |
| H9A | 0.4079 | 1.0133 | 0.9588 | 0.034* | |
| H9B | 0.466 | 1.0045 | 0.833 | 0.034* | |
| O2 | 0.39428 (6) | 0.49783 (11) | 0.80455 (11) | 0.0341 (2) | |
| O3 | 0.32068 (5) | 0.75783 (10) | 0.75195 (11) | 0.0353 (2) | |
| H2 | 0.3478 (12) | 0.449 (2) | 0.727 (2) | 0.069 (5)* |
| C1 | 0.0214 (6) | 0.0264 (6) | 0.0251 (6) | −0.0031 (5) | 0.0090 (5) | −0.0026 (5) |
| C2 | 0.0240 (6) | 0.0226 (6) | 0.0279 (7) | −0.0018 (5) | 0.0062 (5) | −0.0018 (5) |
| C3 | 0.0293 (7) | 0.0270 (7) | 0.0342 (7) | 0.0028 (5) | 0.0105 (6) | 0.0043 (5) |
| C4 | 0.0374 (8) | 0.0216 (6) | 0.0387 (7) | −0.0023 (5) | 0.0144 (6) | −0.0018 (5) |
| C5 | 0.0280 (7) | 0.0281 (6) | 0.0317 (7) | −0.0065 (5) | 0.0083 (5) | −0.0057 (5) |
| C6 | 0.0221 (7) | 0.0279 (6) | 0.0231 (6) | −0.0031 (5) | 0.0055 (5) | −0.0062 (4) |
| N1 | 0.0207 (6) | 0.0276 (6) | 0.0280 (6) | −0.0013 (4) | 0.0030 (5) | 0.0001 (4) |
| N2 | 0.0245 (6) | 0.0274 (6) | 0.0301 (6) | −0.0012 (4) | 0.0048 (4) | 0.0009 (4) |
| N3 | 0.0284 (6) | 0.0319 (6) | 0.0290 (6) | 0.0001 (5) | 0.0038 (5) | 0.0023 (5) |
| O1 | 0.0232 (5) | 0.0372 (5) | 0.0346 (5) | −0.0062 (4) | 0.0010 (4) | 0.0019 (4) |
| C7 | 0.0228 (7) | 0.0276 (7) | 0.0266 (6) | 0.0012 (5) | 0.0042 (5) | 0.0027 (5) |
| C8 | 0.0291 (7) | 0.0348 (8) | 0.0350 (7) | 0.0021 (5) | −0.0058 (6) | −0.0030 (5) |
| C9 | 0.0206 (7) | 0.0321 (7) | 0.0292 (7) | 0.0011 (5) | 0.0014 (5) | −0.0023 (5) |
| O2 | 0.0296 (5) | 0.0276 (5) | 0.0382 (6) | 0.0027 (4) | −0.0059 (4) | −0.0015 (4) |
| O3 | 0.0244 (5) | 0.0306 (5) | 0.0444 (5) | 0.0030 (4) | −0.0047 (4) | 0.0000 (4) |
| C1—C2 | 1.3845 (16) | N1—H1 | 0.877 (14) |
| C1—C5 | 1.3908 (15) | N3—H3A | 0.934 (14) |
| C1—C6 | 1.4932 (16) | N3—H3B | 0.888 (15) |
| C2—N2 | 1.3371 (15) | C7—O3 | 1.2180 (13) |
| C2—H2A | 0.95 | C7—O2 | 1.3154 (13) |
| C3—N2 | 1.3382 (15) | C7—C8 | 1.4965 (17) |
| C3—C4 | 1.3747 (18) | C8—C9 | 1.5113 (16) |
| C3—H3 | 0.95 | C8—H8A | 0.99 |
| C4—C5 | 1.3744 (17) | C8—H8B | 0.99 |
| C4—H4 | 0.95 | C9—C9i | 1.522 (2) |
| C5—H5 | 0.95 | C9—H9A | 0.99 |
| C6—O1 | 1.2317 (14) | C9—H9B | 0.99 |
| C6—N1 | 1.3383 (15) | O2—H2 | 0.950 (19) |
| N1—N3 | 1.4178 (14) | ||
| C2—C1—C5 | 118.13 (10) | C2—N2—C3 | 118.21 (10) |
| C2—C1—C6 | 122.68 (10) | N1—N3—H3A | 106.8 (8) |
| C5—C1—C6 | 119.16 (10) | N1—N3—H3B | 105.7 (9) |
| N2—C2—C1 | 122.79 (10) | H3A—N3—H3B | 105.8 (12) |
| N2—C2—H2A | 118.6 | O3—C7—O2 | 123.24 (11) |
| C1—C2—H2A | 118.6 | O3—C7—C8 | 124.36 (10) |
| N2—C3—C4 | 122.64 (11) | O2—C7—C8 | 112.40 (10) |
| N2—C3—H3 | 118.7 | C7—C8—C9 | 115.55 (10) |
| C4—C3—H3 | 118.7 | C7—C8—H8A | 108.4 |
| C5—C4—C3 | 119.13 (11) | C9—C8—H8A | 108.4 |
| C5—C4—H4 | 120.4 | C7—C8—H8B | 108.4 |
| C3—C4—H4 | 120.4 | C9—C8—H8B | 108.4 |
| C4—C5—C1 | 119.08 (11) | H8A—C8—H8B | 107.5 |
| C4—C5—H5 | 120.5 | C8—C9—C9i | 112.33 (12) |
| C1—C5—H5 | 120.5 | C8—C9—H9A | 109.1 |
| O1—C6—N1 | 122.82 (11) | C9i—C9—H9A | 109.1 |
| O1—C6—C1 | 120.92 (10) | C8—C9—H9B | 109.1 |
| N1—C6—C1 | 116.25 (10) | C9i—C9—H9B | 109.1 |
| C6—N1—N3 | 122.12 (10) | H9A—C9—H9B | 107.9 |
| C6—N1—H1 | 120.3 (8) | C7—O2—H2 | 110.9 (10) |
| N3—N1—H1 | 116.6 (8) | ||
| C5—C1—C2—N2 | 0.84 (16) | C5—C1—C6—N1 | −143.68 (10) |
| C6—C1—C2—N2 | 178.88 (10) | O1—C6—N1—N3 | −3.28 (17) |
| N2—C3—C4—C5 | 0.17 (17) | C1—C6—N1—N3 | 175.83 (10) |
| C3—C4—C5—C1 | 1.15 (17) | C1—C2—N2—C3 | 0.45 (15) |
| C2—C1—C5—C4 | −1.61 (15) | C4—C3—N2—C2 | −0.97 (15) |
| C6—C1—C5—C4 | −179.73 (10) | O3—C7—C8—C9 | −14.84 (18) |
| C2—C1—C6—O1 | −142.57 (11) | O2—C7—C8—C9 | 165.28 (10) |
| C5—C1—C6—O1 | 35.46 (15) | C7—C8—C9—C9i | 179.74 (12) |
| C2—C1—C6—N1 | 38.30 (15) |
| H··· | ||||
| N1—H1···O3ii | 0.877 (14) | 2.174 (15) | 3.0409 (14) | 169.7 (11) |
| N3—H3A···O1iii | 0.934 (14) | 2.129 (14) | 3.0349 (14) | 163.0 (12) |
| N3—H3B···O1iv | 0.888 (15) | 2.258 (16) | 3.1426 (14) | 173.7 (13) |
| O2—H2···N2 | 0.950 (19) | 1.671 (19) | 2.6126 (13) | 170.3 (16) |
| C2—H2A···O3 | 0.95 | 2.73 | 3.3838 (14) | 126. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O3i | 0.877 (14) | 2.174 (15) | 3.0409 (14) | 169.7 (11) |
| N3—H3 | 0.934 (14) | 2.129 (14) | 3.0349 (14) | 163.0 (12) |
| N3—H3 | 0.888 (15) | 2.258 (16) | 3.1426 (14) | 173.7 (13) |
| O2—H2⋯N2 | 0.950 (19) | 1.671 (19) | 2.6126 (13) | 170.3 (16) |
| C2—H2 | 0.95 | 2.73 | 3.3838 (14) | 126 |
Symmetry codes: (i) ; (ii) ; (iii) .