Literature DB >> 22259428

4,6-Dichloro-2-{[(E)-(3-{[(E)-3,5-dichloro-2-hy-droxy-benzyl-idene]amino}-2,2-dimethyl-prop-yl)imino]-meth-yl}phenol.

Hadi Kargar, Reza Kia, Saeideh Abbasian, Muhammad Nawaz Tahir.   

Abstract

In the title compound, C(19)H(18)Cl(4)N(2)O(2), a potential tetra-dentate Schiff base ligand, the dihedral angle between the two benzene rings is 48.01 (10)°. The configuration about the two C=N bonds is E and two intra-molecular O-H⋯N hydrogen bonds make S(6) ring motifs. In the crystal, mol-ecules are linked along the b axis via inter-molecular C-H⋯Cl inter-actions. The crystal structure is further stabilized by an inter-molecular π-π inter-action [centroid-centroid distance = 3.5744 (12) Å].

Entities:  

Year:  2011        PMID: 22259428      PMCID: PMC3254485          DOI: 10.1107/S1600536811053438

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For standard bond-lengths, see: Allen et al. (1987 ▶). For hydrogen bond motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Kargar et al. (2011 ▶); Kia et al. (2010 ▶).

Experimental

Crystal data

C19H18Cl4N2O2 M = 448.15 Monoclinic, a = 16.5265 (5) Å b = 10.3242 (3) Å c = 12.6433 (4) Å β = 104.796 (1)° V = 2085.70 (11) Å3 Z = 4 Mo Kα radiation μ = 0.58 mm−1 T = 296 K 0.18 × 0.12 × 0.08 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.902, T max = 0.955 19903 measured reflections 5165 independent reflections 3427 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.119 S = 1.03 5165 reflections 246 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811053438/su2348sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811053438/su2348Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811053438/su2348Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H18Cl4N2O2F(000) = 920
Mr = 448.15Dx = 1.427 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2540 reflections
a = 16.5265 (5) Åθ = 2.5–27.4°
b = 10.3242 (3) ŵ = 0.58 mm1
c = 12.6433 (4) ÅT = 296 K
β = 104.796 (1)°Block, yellow
V = 2085.70 (11) Å30.18 × 0.12 × 0.08 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer5165 independent reflections
Radiation source: fine-focus sealed tube3427 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 28.3°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −22→22
Tmin = 0.902, Tmax = 0.955k = −13→13
19903 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0483P)2 + 0.5514P] where P = (Fo2 + 2Fc2)/3
5165 reflections(Δ/σ)max = 0.001
246 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.38 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.21903 (4)−0.02100 (8)−0.20278 (6)0.0929 (2)
Cl2−0.10588 (6)0.11487 (9)0.21661 (6)0.1149 (4)
Cl30.46259 (4)0.99049 (7)0.34212 (5)0.0831 (2)
Cl40.41065 (4)1.19135 (6)−0.06309 (6)0.0755 (2)
O10.03427 (11)0.22770 (15)0.14769 (12)0.0690 (4)
H10.07910.25440.12160.104*
O20.39245 (10)0.75500 (14)0.22723 (12)0.0621 (4)
H2A0.37250.68890.18180.093*
N10.11973 (11)0.27146 (15)0.00940 (14)0.0512 (4)
N20.33256 (10)0.61812 (16)0.05705 (15)0.0540 (4)
C1−0.01322 (12)0.16963 (17)−0.04155 (15)0.0436 (4)
C2−0.07424 (13)0.1108 (2)−0.12407 (17)0.0529 (5)
H2−0.06800.1085−0.19510.063*
C3−0.14354 (12)0.0562 (2)−0.10131 (19)0.0561 (5)
C4−0.15422 (13)0.05939 (19)0.0031 (2)0.0583 (5)
H4−0.20160.02310.01810.070*
C5−0.09431 (14)0.11660 (19)0.08457 (18)0.0561 (5)
C6−0.02244 (13)0.17359 (17)0.06566 (16)0.0488 (5)
C70.06112 (13)0.22448 (17)−0.06553 (16)0.0484 (5)
H70.06570.2251−0.13730.058*
C80.19538 (14)0.32198 (19)−0.01584 (19)0.0563 (5)
H8A0.18450.3363−0.09400.068*
H8B0.23990.25850.00490.068*
C90.22377 (12)0.44956 (17)0.04474 (16)0.0478 (4)
C100.15394 (14)0.5495 (2)0.0148 (2)0.0665 (6)
H10A0.17290.63000.05080.100*
H10B0.10620.51920.03770.100*
H10C0.13870.5625−0.06300.100*
C110.24805 (17)0.4257 (3)0.16823 (19)0.0722 (6)
H11A0.26590.50570.20570.108*
H11B0.29290.36390.18620.108*
H11C0.20060.39270.19030.108*
C120.30059 (13)0.49455 (19)0.00771 (19)0.0565 (5)
H12A0.34420.42960.02770.068*
H12B0.28570.5031−0.07130.068*
C130.33932 (12)0.71454 (19)−0.00290 (18)0.0517 (5)
H130.32380.7055−0.07860.062*
C140.37085 (11)0.83825 (18)0.04477 (17)0.0476 (4)
C150.39724 (12)0.85146 (19)0.15984 (17)0.0496 (5)
C160.42908 (12)0.9726 (2)0.20143 (18)0.0541 (5)
C170.43340 (13)1.0753 (2)0.1340 (2)0.0594 (6)
H170.45461.15460.16360.071*
C180.40590 (13)1.0599 (2)0.02195 (19)0.0552 (5)
C190.37588 (12)0.9427 (2)−0.02257 (18)0.0523 (5)
H190.35880.9332−0.09820.063*
U11U22U33U12U13U23
Cl10.0543 (4)0.1232 (6)0.0882 (5)−0.0138 (4)−0.0059 (3)−0.0123 (4)
Cl20.1553 (8)0.1295 (7)0.0893 (5)−0.0722 (6)0.0850 (6)−0.0384 (5)
Cl30.0872 (5)0.0918 (5)0.0674 (4)−0.0259 (4)0.0148 (3)−0.0268 (3)
Cl40.0754 (4)0.0543 (3)0.1042 (5)0.0008 (3)0.0363 (4)0.0125 (3)
O10.0863 (11)0.0739 (10)0.0535 (9)−0.0326 (9)0.0301 (8)−0.0173 (7)
O20.0711 (10)0.0547 (8)0.0578 (9)−0.0074 (7)0.0115 (8)−0.0026 (7)
N10.0587 (10)0.0428 (9)0.0580 (10)−0.0102 (7)0.0258 (8)−0.0038 (7)
N20.0503 (9)0.0469 (9)0.0671 (11)−0.0085 (7)0.0191 (8)−0.0114 (8)
C10.0483 (10)0.0370 (9)0.0478 (10)0.0032 (7)0.0166 (8)0.0044 (8)
C20.0533 (12)0.0557 (12)0.0478 (11)0.0066 (9)0.0094 (9)0.0042 (9)
C30.0422 (10)0.0541 (12)0.0670 (14)0.0042 (9)0.0052 (9)0.0007 (10)
C40.0523 (12)0.0457 (11)0.0840 (16)−0.0002 (9)0.0305 (11)−0.0033 (11)
C50.0687 (13)0.0475 (11)0.0625 (13)−0.0057 (10)0.0358 (11)−0.0058 (10)
C60.0617 (12)0.0361 (9)0.0540 (11)−0.0032 (8)0.0248 (10)−0.0040 (8)
C70.0611 (12)0.0419 (10)0.0468 (11)0.0022 (9)0.0223 (9)0.0032 (8)
C80.0621 (13)0.0464 (11)0.0688 (14)−0.0103 (9)0.0319 (11)−0.0100 (10)
C90.0514 (11)0.0403 (10)0.0552 (11)−0.0026 (8)0.0202 (9)−0.0067 (8)
C100.0596 (13)0.0503 (12)0.0909 (17)0.0019 (10)0.0214 (12)−0.0018 (12)
C110.0799 (16)0.0775 (16)0.0589 (14)−0.0062 (13)0.0171 (12)−0.0038 (12)
C120.0573 (12)0.0485 (11)0.0693 (14)−0.0104 (9)0.0262 (11)−0.0170 (10)
C130.0462 (11)0.0539 (12)0.0560 (12)−0.0055 (9)0.0148 (9)−0.0109 (10)
C140.0375 (9)0.0459 (10)0.0605 (12)−0.0032 (8)0.0147 (9)−0.0068 (9)
C150.0398 (10)0.0483 (11)0.0615 (13)−0.0013 (8)0.0145 (9)−0.0078 (9)
C160.0440 (10)0.0583 (12)0.0610 (13)−0.0061 (9)0.0150 (9)−0.0164 (10)
C170.0486 (11)0.0473 (11)0.0863 (17)−0.0085 (9)0.0244 (11)−0.0151 (11)
C180.0461 (11)0.0479 (11)0.0763 (15)0.0008 (9)0.0244 (10)0.0006 (10)
C190.0432 (10)0.0545 (11)0.0613 (13)−0.0014 (9)0.0173 (9)−0.0036 (10)
Cl1—C31.738 (2)C8—H8A0.9700
Cl2—C51.728 (2)C8—H8B0.9700
Cl3—C161.733 (2)C9—C101.522 (3)
Cl4—C181.745 (2)C9—C111.529 (3)
O1—C61.330 (2)C9—C121.533 (3)
O1—H10.9260C10—H10A0.9600
O2—C151.326 (2)C10—H10B0.9600
O2—H2A0.8989C10—H10C0.9600
N1—C71.266 (3)C11—H11A0.9600
N1—C81.463 (2)C11—H11B0.9600
N2—C131.273 (3)C11—H11C0.9600
N2—C121.459 (2)C12—H12A0.9700
C1—C21.392 (3)C12—H12B0.9700
C1—C61.403 (3)C13—C141.451 (3)
C1—C71.453 (3)C13—H130.9300
C2—C31.371 (3)C14—C191.390 (3)
C2—H20.9300C14—C151.415 (3)
C3—C41.377 (3)C15—C161.406 (3)
C4—C51.367 (3)C16—C171.374 (3)
C4—H40.9300C17—C181.382 (3)
C5—C61.400 (3)C17—H170.9300
C7—H70.9300C18—C191.373 (3)
C8—C91.536 (3)C19—H190.9300
C6—O1—H1108.4C9—C10—H10B109.5
C15—O2—H2A103.5H10A—C10—H10B109.5
C7—N1—C8120.43 (17)C9—C10—H10C109.5
C13—N2—C12120.43 (19)H10A—C10—H10C109.5
C2—C1—C6120.03 (18)H10B—C10—H10C109.5
C2—C1—C7120.20 (18)C9—C11—H11A109.5
C6—C1—C7119.76 (18)C9—C11—H11B109.5
C3—C2—C1120.40 (19)H11A—C11—H11B109.5
C3—C2—H2119.8C9—C11—H11C109.5
C1—C2—H2119.8H11A—C11—H11C109.5
C2—C3—C4120.7 (2)H11B—C11—H11C109.5
C2—C3—Cl1120.95 (18)N2—C12—C9111.85 (16)
C4—C3—Cl1118.37 (17)N2—C12—H12A109.2
C5—C4—C3119.14 (19)C9—C12—H12A109.2
C5—C4—H4120.4N2—C12—H12B109.2
C3—C4—H4120.4C9—C12—H12B109.2
C4—C5—C6122.4 (2)H12A—C12—H12B107.9
C4—C5—Cl2119.05 (16)N2—C13—C14121.18 (19)
C6—C5—Cl2118.52 (17)N2—C13—H13119.4
O1—C6—C5120.20 (18)C14—C13—H13119.4
O1—C6—C1122.47 (17)C19—C14—C15120.27 (18)
C5—C6—C1117.33 (19)C19—C14—C13120.01 (19)
N1—C7—C1121.28 (18)C15—C14—C13119.72 (18)
N1—C7—H7119.4O2—C15—C16120.39 (19)
C1—C7—H7119.4O2—C15—C14122.35 (17)
N1—C8—C9111.48 (16)C16—C15—C14117.26 (19)
N1—C8—H8A109.3C17—C16—C15121.9 (2)
C9—C8—H8A109.3C17—C16—Cl3120.06 (16)
N1—C8—H8B109.3C15—C16—Cl3118.02 (17)
C9—C8—H8B109.3C16—C17—C18119.44 (19)
H8A—C8—H8B108.0C16—C17—H17120.3
C10—C9—C11110.33 (18)C18—C17—H17120.3
C10—C9—C12110.66 (17)C19—C18—C17120.8 (2)
C11—C9—C12109.80 (18)C19—C18—Cl4120.06 (18)
C10—C9—C8110.00 (18)C17—C18—Cl4119.17 (16)
C11—C9—C8109.78 (17)C18—C19—C14120.3 (2)
C12—C9—C8106.19 (15)C18—C19—H19119.8
C9—C10—H10A109.5C14—C19—H19119.8
C6—C1—C2—C3−0.1 (3)C13—N2—C12—C9−123.0 (2)
C7—C1—C2—C3178.47 (18)C10—C9—C12—N258.9 (2)
C1—C2—C3—C40.4 (3)C11—C9—C12—N2−63.2 (2)
C1—C2—C3—Cl1−178.43 (15)C8—C9—C12—N2178.20 (18)
C2—C3—C4—C5−0.7 (3)C12—N2—C13—C14179.89 (17)
Cl1—C3—C4—C5178.21 (16)N2—C13—C14—C19−178.60 (18)
C3—C4—C5—C60.6 (3)N2—C13—C14—C152.1 (3)
C3—C4—C5—Cl2−177.50 (16)C19—C14—C15—O2179.00 (18)
C4—C5—C6—O1−179.76 (19)C13—C14—C15—O2−1.7 (3)
Cl2—C5—C6—O1−1.6 (3)C19—C14—C15—C16−0.8 (3)
C4—C5—C6—C1−0.3 (3)C13—C14—C15—C16178.51 (17)
Cl2—C5—C6—C1177.81 (15)O2—C15—C16—C17−178.70 (18)
C2—C1—C6—O1179.48 (18)C14—C15—C16—C171.1 (3)
C7—C1—C6—O10.9 (3)O2—C15—C16—Cl30.7 (3)
C2—C1—C6—C50.1 (3)C14—C15—C16—Cl3−179.46 (14)
C7—C1—C6—C5−178.52 (17)C15—C16—C17—C18−0.1 (3)
C8—N1—C7—C1177.78 (17)Cl3—C16—C17—C18−179.55 (16)
C2—C1—C7—N1−175.71 (18)C16—C17—C18—C19−1.2 (3)
C6—C1—C7—N12.9 (3)C16—C17—C18—Cl4179.39 (15)
C7—N1—C8—C9137.80 (19)C17—C18—C19—C141.5 (3)
N1—C8—C9—C10−57.9 (2)Cl4—C18—C19—C14−179.09 (15)
N1—C8—C9—C1163.7 (2)C15—C14—C19—C18−0.5 (3)
N1—C8—C9—C12−177.66 (18)C13—C14—C19—C18−179.79 (17)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.931.732.553 (2)147
O2—H2A···N20.901.712.553 (2)155
C12—H12B···Cl1i0.972.803.749 (2)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.931.732.553 (2)147
O2—H2A⋯N20.901.712.553 (2)155
C12—H12B⋯Cl1i0.972.803.749 (2)167

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  5,5'-Bis(diethyl-amino)-2,2'-[2,2-di-methyl-propane-1,3-diylbis-(nitrilo-methylidyne)]diphenol.

Authors:  Reza Kia; Hadi Kargar; Muhammad Nawaz Tahir; Fatemeh Kianoosh
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-11

3.  4,4'-Dimeth-oxy-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methanylyl-idene)]diphenol.

Authors:  Hadi Kargar; Reza Kia; Elham Pahlavani; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-12

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  1 in total

1.  2-((E)-{3-[(E)-2-Hy-droxy-3,5-diiodo-benzyl-idene-amino]-2,2-dimethyl-prop-yl}imino-meth-yl)-4,6-diiodo-phenol.

Authors:  Hadi Kargar; Reza Kia; Tayebeh Shakarami; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-04
  1 in total

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