| Literature DB >> 22259422 |
Qiang Cao, Bao-Rong Duan, Bin Zhu, Zhen Cao.
Abstract
In the title compound, C(4)H(4)N(2)O(2), both imidazole N atoms are protonated and carboxyl-ate group is deprotonated, resulting in a zwitterion. The mol-ecule is essentially planar, with an r.m.s. deviation of 0.012 (1) Å. In the crystal, N-H⋯O hydrogen bonds and π-π stacking inter-actions [centroid-centroid distance = 3.674 (2) Å] between the imidazole rings link the mol-ecules into a three-dimensional supra-molecular network.Entities:
Year: 2011 PMID: 22259422 PMCID: PMC3254480 DOI: 10.1107/S1600536811052998
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H4N2O2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 1380 reflections |
| θ = 2.6–27.0° | |
| µ = 0.14 mm−1 | |
| Block, colourless | |
| 0.25 × 0.21 × 0.18 mm |
| Bruker APEXII CCD area-detector diffractometer | 510 independent reflections |
| Radiation source: fine-focus sealed tube | 480 reflections with |
| graphite | |
| phi and ω scans | θmax = 26.0°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 2280 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 510 reflections | (Δ/σ)max < 0.001 |
| 73 parameters | Δρmax = 0.12 e Å−3 |
| 1 restraint | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C2 | 0.15183 (19) | 0.33109 (16) | 0.6250 (7) | 0.0265 (5) | |
| C1 | 0.20900 (19) | 0.44287 (17) | 0.5153 (6) | 0.0268 (5) | |
| N2 | 0.10851 (15) | 0.15065 (14) | 0.7501 (6) | 0.0302 (5) | |
| H2 | 0.1149 | 0.0774 | 0.7660 | 0.036* | |
| C4 | 0.0113 (2) | 0.21278 (18) | 0.8693 (7) | 0.0301 (5) | |
| H4 | −0.0610 | 0.1844 | 0.9853 | 0.036* | |
| O2 | 0.31910 (13) | 0.43682 (12) | 0.3734 (5) | 0.0361 (5) | |
| O1 | 0.14526 (14) | 0.53104 (13) | 0.5736 (6) | 0.0367 (5) | |
| N1 | 0.03417 (16) | 0.32279 (14) | 0.7956 (6) | 0.0284 (5) | |
| H1 | −0.0158 | 0.3791 | 0.8456 | 0.034* | |
| C3 | 0.1970 (2) | 0.22218 (17) | 0.5977 (7) | 0.0280 (5) | |
| H3 | 0.2743 | 0.2003 | 0.4940 | 0.034* |
| C2 | 0.0254 (9) | 0.0223 (10) | 0.0320 (13) | 0.0003 (8) | −0.0016 (10) | 0.0003 (10) |
| C1 | 0.0295 (11) | 0.0190 (9) | 0.0319 (13) | 0.0011 (8) | −0.0047 (9) | 0.0035 (9) |
| N2 | 0.0323 (9) | 0.0181 (8) | 0.0401 (11) | −0.0007 (7) | −0.0033 (9) | 0.0011 (9) |
| C4 | 0.0275 (10) | 0.0271 (10) | 0.0358 (14) | −0.0035 (8) | −0.0004 (9) | 0.0032 (11) |
| O2 | 0.0324 (8) | 0.0235 (7) | 0.0524 (12) | −0.0013 (6) | 0.0078 (8) | 0.0043 (9) |
| O1 | 0.0352 (8) | 0.0203 (7) | 0.0545 (12) | 0.0047 (6) | −0.0018 (8) | 0.0025 (9) |
| N1 | 0.0279 (9) | 0.0203 (8) | 0.0371 (11) | 0.0024 (7) | −0.0016 (9) | −0.0004 (8) |
| C3 | 0.0261 (9) | 0.0222 (10) | 0.0357 (14) | −0.0005 (8) | −0.0022 (10) | 0.0017 (10) |
| C2—C3 | 1.361 (3) | N2—C3 | 1.368 (3) |
| C2—N1 | 1.386 (3) | N2—H2 | 0.8600 |
| C2—C1 | 1.491 (3) | C4—N1 | 1.334 (3) |
| C1—O1 | 1.246 (3) | C4—H4 | 0.9300 |
| C1—O2 | 1.267 (3) | N1—H1 | 0.8600 |
| N2—C4 | 1.324 (3) | C3—H3 | 0.9300 |
| C3—C2—N1 | 106.10 (17) | N2—C4—N1 | 108.81 (19) |
| C3—C2—C1 | 131.2 (2) | N2—C4—H4 | 125.6 |
| N1—C2—C1 | 122.71 (17) | N1—C4—H4 | 125.6 |
| O1—C1—O2 | 127.19 (19) | C4—N1—C2 | 108.57 (17) |
| O1—C1—C2 | 117.49 (18) | C4—N1—H1 | 125.7 |
| O2—C1—C2 | 115.32 (18) | C2—N1—H1 | 125.7 |
| C4—N2—C3 | 108.78 (17) | C2—C3—N2 | 107.74 (19) |
| C4—N2—H2 | 125.6 | C2—C3—H3 | 126.1 |
| C3—N2—H2 | 125.6 | N2—C3—H3 | 126.1 |
| C3—C2—C1—O1 | −180.0 (3) | C3—C2—N1—C4 | 0.5 (3) |
| N1—C2—C1—O1 | −1.9 (3) | C1—C2—N1—C4 | −178.0 (2) |
| C3—C2—C1—O2 | −0.5 (4) | N1—C2—C3—N2 | −0.2 (3) |
| N1—C2—C1—O2 | 177.6 (2) | C1—C2—C3—N2 | 178.1 (2) |
| C3—N2—C4—N1 | 0.4 (3) | C4—N2—C3—C2 | −0.1 (3) |
| N2—C4—N1—C2 | −0.6 (3) |
| H··· | ||||
| N2—H2···O2i | 0.86 | 1.82 | 2.648 (2) | 160. |
| N1—H1···O1ii | 0.86 | 1.91 | 2.736 (2) | 161. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O2i | 0.86 | 1.82 | 2.648 (2) | 160 |
| N1—H1⋯O1ii | 0.86 | 1.91 | 2.736 (2) | 161 |
Symmetry codes: (i) ; (ii) .