Literature DB >> 22259328

Poly[[hexa-aqua-(μ(2)-oxalato-κO,O:O,O)bis(μ(3)-pyridine-2,4-dicarboxyl-ato-κN,O:O:O)dicerium(III)] monohydrate].

Fwu Ming Shen, Shie Fu Lush.   

Abstract

In the polymeric title compound, {[Ce(2)(C(7)H(3)NO(4))(2)(C(2)O(4))(H(2)O)(6)]·H(2)O}(n), the Ce(3+) cation is nine-coordinated in a distorted CeNO(8) tricapped trigonal-prismatic geometry, formed by three pyridine-2,4-dicarboxyl-ate anions, one oxalate anion and three water mol-ecules. The mid-point of the oxalate anion is located on an inversion center. The oxalate and pyridine-2,4-dicarboxyl-ate anions bridge the Ce(3+) cations, forming a two-dimensional polymeric complex parallel to (010). Inter-molecular classical O-H⋯O hydrogen bonding and weak C-H⋯O hydrogen bonding are present in the crystal structure and π-π stacking [centroid-centroid distance = 3.558 (2) Å] is observed between parallel pyridine rings of adjacent mol-ecules. The uncoordinated water mol-ecule shows an occupancy of 0.5.

Entities:  

Year:  2011        PMID: 22259328      PMCID: PMC3254299          DOI: 10.1107/S1600536811051956

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isotypic La3+ complex, see: Shen & Lush (2011 ▶). For related pyridine-2,4-dicarboxyl­ate complexes, see: Aghabozorg et al. (2011 ▶); Li et al. (2007 ▶); Wang et al. (2009 ▶).

Experimental

Crystal data

[Ce2(C7H3NO4)2(C2O4)(H2O)6]·H2O M = 824.58 Triclinic, a = 6.4160 (5) Å b = 6.6486 (6) Å c = 13.9920 (12) Å α = 89.917 (1)° β = 85.588 (1)° γ = 73.676 (1)° V = 570.98 (8) Å3 Z = 1 Mo Kα radiation μ = 4.04 mm−1 T = 294 K 0.30 × 0.10 × 0.10 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.639, T max = 0.937 6072 measured reflections 2664 independent reflections 2416 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.081 S = 1.10 2664 reflections 177 parameters H-atom parameters constrained Δρmax = 2.75 e Å−3 Δρmin = −2.70 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811051956/xu5400sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811051956/xu5400Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ce2(C7H3NO4)2(C2O4)(H2O)6]·H2OZ = 1
Mr = 824.58F(000) = 398
Triclinic, P1Dx = 2.398 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.4160 (5) ÅCell parameters from 4490 reflections
b = 6.6486 (6) Åθ = 2.5–25.0°
c = 13.9920 (12) ŵ = 4.04 mm1
α = 89.917 (1)°T = 294 K
β = 85.588 (1)°Columnar, colorless
γ = 73.676 (1)°0.30 × 0.10 × 0.10 mm
V = 570.98 (8) Å3
Bruker SMART 1000 CCD area-detector diffractometer2664 independent reflections
Radiation source: fine-focus sealed tube2416 reflections with I > 2σ(I)
graphiteRint = 0.030
Detector resolution: 9 pixels mm-1θmax = 27.8°, θmin = 1.5°
φ and ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Bruker, 2001)k = −8→8
Tmin = 0.639, Tmax = 0.937l = −18→18
6072 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028H-atom parameters constrained
wR(F2) = 0.081w = 1/[σ2(Fo2) + (0.0523P)2 + 0.4154P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.019
2664 reflectionsΔρmax = 2.75 e Å3
177 parametersΔρmin = −2.70 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), FC*=KFC[1+0.001XFC2Λ3/SIN(2Θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0071 (15)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ce0.36484 (3)0.33000 (3)0.80343 (1)0.0198 (1)
O10.7620 (6)0.3463 (6)0.2798 (2)0.0356 (11)
O21.0901 (6)0.2177 (7)0.3373 (3)0.0438 (13)
O31.0817 (5)0.2746 (6)0.7009 (2)0.0350 (10)
O40.7595 (5)0.3214 (7)0.7822 (2)0.0380 (13)
O50.5054 (7)0.2476 (5)0.9655 (2)0.0408 (13)
O60.5773 (6)0.3678 (5)1.1047 (2)0.0360 (10)
O70.0036 (8)0.5134 (8)0.8992 (4)0.0729 (14)
O80.5654 (6)−0.0533 (6)0.7844 (3)0.0419 (11)
O90.1789 (8)0.0870 (8)0.8994 (4)0.0729 (14)
N10.5723 (5)0.2600 (6)0.6274 (2)0.0208 (9)
C10.7770 (7)0.2748 (6)0.6150 (3)0.0218 (11)
C20.5683 (7)0.2406 (7)0.4556 (3)0.0248 (11)
C30.7772 (7)0.2622 (7)0.4439 (3)0.0227 (11)
C40.8836 (7)0.2747 (7)0.5250 (3)0.0251 (11)
C50.4745 (7)0.2392 (7)0.5484 (3)0.0256 (12)
C60.8875 (8)0.2745 (7)0.3451 (3)0.0275 (12)
C70.8828 (7)0.2921 (7)0.7052 (3)0.0246 (11)
C80.5247 (7)0.3884 (6)1.0201 (3)0.0237 (11)
O10−0.1094 (13)−0.0862 (13)0.9223 (7)0.050 (3)0.500
H2A0.493000.227400.402900.039 (15)*
H4A1.026300.282900.519100.0300*
H5A0.334900.222800.556000.0300*
H7A−0.078000.470600.863200.0800*
H7B−0.025000.636800.882800.0800*
H8A0.53670−0.162000.818200.0800*
H8B0.65420−0.095000.734900.0800*
H9A0.24360−0.067400.894200.0800*
H9B0.065000.090500.873000.0800*
H10A−0.219700.007900.907600.0800*0.500
H10B−0.12520−0.129600.985600.0800*0.500
U11U22U33U12U13U23
Ce0.0191 (2)0.0294 (2)0.0134 (1)−0.0113 (1)−0.0006 (1)0.0005 (1)
O10.0380 (19)0.044 (2)0.0238 (16)−0.0092 (16)−0.0055 (14)0.0092 (14)
O20.0270 (18)0.064 (3)0.0303 (19)0.0011 (17)0.0068 (15)0.0078 (17)
O30.0199 (15)0.061 (2)0.0274 (17)−0.0163 (15)−0.0040 (13)−0.0028 (15)
O40.0268 (17)0.075 (3)0.0185 (15)−0.0250 (17)−0.0004 (13)−0.0012 (16)
O50.074 (3)0.0266 (17)0.0225 (16)−0.0142 (17)−0.0080 (17)−0.0003 (13)
O60.058 (2)0.0306 (17)0.0222 (16)−0.0141 (16)−0.0143 (15)0.0071 (13)
O70.055 (2)0.061 (2)0.088 (3)−0.0018 (16)0.0304 (19)0.0251 (19)
O80.048 (2)0.0333 (19)0.041 (2)−0.0115 (16)0.0176 (17)−0.0007 (15)
O90.055 (2)0.061 (2)0.088 (3)−0.0018 (16)0.0304 (19)0.0251 (19)
N10.0174 (16)0.0268 (17)0.0193 (16)−0.0077 (13)−0.0030 (13)0.0001 (13)
C10.0197 (19)0.024 (2)0.022 (2)−0.0068 (16)−0.0017 (15)0.0017 (15)
C20.028 (2)0.030 (2)0.0179 (19)−0.0099 (17)−0.0049 (16)−0.0011 (16)
C30.024 (2)0.025 (2)0.0162 (18)−0.0024 (16)−0.0005 (15)0.0042 (15)
C40.0172 (19)0.035 (2)0.022 (2)−0.0057 (17)−0.0003 (16)0.0045 (17)
C50.022 (2)0.031 (2)0.026 (2)−0.0110 (17)−0.0029 (16)0.0014 (17)
C60.033 (2)0.029 (2)0.017 (2)−0.0045 (18)0.0037 (17)−0.0004 (16)
C70.0196 (19)0.033 (2)0.025 (2)−0.0129 (17)−0.0041 (16)0.0032 (17)
C80.028 (2)0.023 (2)0.0189 (19)−0.0052 (16)−0.0027 (16)0.0009 (15)
O100.037 (4)0.042 (4)0.072 (6)−0.010 (3)−0.013 (4)0.009 (4)
Ce—N12.684 (3)O8—H8B0.8600
Ce—O1i2.409 (4)O9—H9B0.8400
Ce—O3ii2.505 (3)O9—H9A0.9900
Ce—O42.511 (3)O10—H10A0.8400
Ce—O52.508 (3)O10—H10B0.9400
Ce—O6iii2.515 (3)N1—C51.338 (5)
Ce—O72.568 (5)N1—C11.343 (6)
Ce—O82.515 (4)C1—C41.386 (6)
Ce—O92.582 (5)C1—C71.498 (6)
O1—C61.268 (6)C2—C31.385 (7)
O2—C61.244 (7)C2—C51.390 (6)
O3—C71.245 (6)C3—C61.517 (6)
O4—C71.268 (5)C3—C41.383 (6)
O5—C81.248 (5)C8—C8iii1.543 (5)
O6—C81.253 (5)C2—H2A0.9300
O7—H7B0.8300C4—H4A0.9300
O7—H7A0.8600C5—H5A0.9300
O8—H8A0.9200
O4—Ce—O574.74 (12)Ce—O5—C8121.3 (3)
O4—Ce—O7142.54 (15)Ceiii—O6—C8120.9 (3)
O4—Ce—O875.62 (14)Ce—O7—H7B105.00
O4—Ce—O9130.01 (15)H7A—O7—H7B99.00
O4—Ce—N161.02 (10)Ce—O7—H7A96.00
O3ii—Ce—O4137.32 (10)Ce—O8—H8A127.00
O1i—Ce—O494.76 (13)H8A—O8—H8B113.00
O4—Ce—O6iii70.50 (13)Ce—O8—H8B119.00
O5—Ce—O784.31 (15)Ce—O9—H9A120.00
O5—Ce—O878.05 (12)H9A—O9—H9B96.00
O5—Ce—O967.22 (15)Ce—O9—H9B107.00
O5—Ce—N1130.72 (12)H10A—O10—H10B112.00
O3ii—Ce—O5141.57 (12)Ce—N1—C5123.6 (3)
O1i—Ce—O5132.71 (11)Ce—N1—C1118.7 (2)
O5—Ce—O6iii64.05 (10)C1—N1—C5117.1 (3)
O7—Ce—O8130.23 (15)N1—C1—C4122.5 (4)
O7—Ce—O964.30 (16)N1—C1—C7115.4 (4)
O7—Ce—N1144.66 (14)C4—C1—C7122.1 (4)
O3ii—Ce—O776.31 (14)C3—C2—C5118.1 (4)
O1i—Ce—O776.97 (15)C2—C3—C6121.4 (4)
O6iii—Ce—O772.47 (15)C4—C3—C6120.3 (4)
O8—Ce—O965.94 (15)C2—C3—C4118.3 (4)
O8—Ce—N171.24 (12)C1—C4—C3119.8 (4)
O3ii—Ce—O889.53 (13)N1—C5—C2124.1 (4)
O1i—Ce—O8144.86 (12)O1—C6—O2127.1 (4)
O6iii—Ce—O8134.19 (12)O2—C6—C3116.8 (4)
O9—Ce—N1127.54 (14)O1—C6—C3116.0 (4)
O3ii—Ce—O974.47 (14)O4—C7—C1116.2 (4)
O1i—Ce—O9134.92 (15)O3—C7—C1119.4 (4)
O6iii—Ce—O9116.36 (14)O3—C7—O4124.4 (4)
O3ii—Ce—N176.35 (10)O5—C8—O6126.7 (4)
O1i—Ce—N174.55 (11)O5—C8—C8iii116.7 (4)
O6iii—Ce—N1114.97 (11)O6—C8—C8iii116.6 (4)
O1i—Ce—O3ii74.72 (12)C5—C2—H2A121.00
O3ii—Ce—O6iii136.22 (12)C3—C2—H2A121.00
O1i—Ce—O6iii68.95 (11)C1—C4—H4A120.00
Cei—O1—C6138.2 (3)C3—C4—H4A120.00
Ceiv—O3—C7140.1 (3)N1—C5—H5A118.00
Ce—O4—C7127.9 (3)C2—C5—H5A118.00
O5—Ce—O4—C7158.0 (4)N1—Ce—O1i—C6i73.5 (5)
O7—Ce—O4—C7−143.7 (4)O4—Ce—O6iii—C8iii−87.9 (4)
O8—Ce—O4—C776.7 (4)O5—Ce—O6iii—C8iii−5.9 (3)
O9—Ce—O4—C7116.9 (4)O7—Ce—O6iii—C8iii86.3 (4)
N1—Ce—O4—C70.5 (4)O8—Ce—O6iii—C8iii−43.3 (4)
O3ii—Ce—O4—C73.6 (5)O9—Ce—O6iii—C8iii37.9 (4)
O1i—Ce—O4—C7−68.9 (4)N1—Ce—O6iii—C8iii−130.9 (3)
O6iii—Ce—O4—C7−134.6 (4)Cei—O1—C6—O2−76.7 (7)
O4—Ce—O5—C880.8 (4)Cei—O1—C6—C3101.7 (5)
O7—Ce—O5—C8−67.9 (4)Ceiv—O3—C7—O4−12.4 (8)
O8—Ce—O5—C8158.9 (4)Ceiv—O3—C7—C1168.6 (3)
O9—Ce—O5—C8−132.4 (4)Ce—O4—C7—O3−174.5 (3)
N1—Ce—O5—C8106.9 (4)Ce—O4—C7—C14.5 (6)
O3ii—Ce—O5—C8−127.4 (4)Ce—O5—C8—O6174.3 (4)
O1i—Ce—O5—C8−1.5 (5)Ce—O5—C8—C8iii−4.7 (6)
O6iii—Ce—O5—C85.4 (4)Ceiii—O6—C8—O5175.0 (4)
O4—Ce—N1—C1−6.1 (3)Ceiii—O6—C8—C8iii−6.0 (5)
O4—Ce—N1—C5−176.6 (4)Ce—N1—C1—C4−169.4 (3)
O5—Ce—N1—C1−35.2 (4)Ce—N1—C1—C710.5 (5)
O5—Ce—N1—C5154.3 (3)C5—N1—C1—C41.7 (6)
O7—Ce—N1—C1135.9 (3)C5—N1—C1—C7−178.4 (4)
O7—Ce—N1—C5−34.6 (5)Ce—N1—C5—C2168.0 (3)
O8—Ce—N1—C1−89.7 (3)C1—N1—C5—C2−2.7 (7)
O8—Ce—N1—C599.8 (4)N1—C1—C4—C31.0 (6)
O9—Ce—N1—C1−126.2 (3)C7—C1—C4—C3−178.8 (4)
O9—Ce—N1—C563.3 (4)N1—C1—C7—O3169.2 (4)
O3ii—Ce—N1—C1176.1 (3)N1—C1—C7—O4−9.8 (6)
O3ii—Ce—N1—C55.6 (3)C4—C1—C7—O3−11.0 (6)
O1i—Ce—N1—C198.5 (3)C4—C1—C7—O4170.0 (4)
O1i—Ce—N1—C5−72.0 (3)C5—C2—C3—C42.0 (6)
O6iii—Ce—N1—C141.2 (3)C5—C2—C3—C6−177.4 (4)
O6iii—Ce—N1—C5−129.3 (3)C3—C2—C5—N10.9 (7)
O4—Ce—O3ii—C7ii−172.6 (4)C2—C3—C4—C1−2.8 (7)
O5—Ce—O3ii—C7ii49.5 (6)C6—C3—C4—C1176.5 (4)
O7—Ce—O3ii—C7ii−12.4 (5)C2—C3—C6—O127.1 (6)
O8—Ce—O3ii—C7ii119.4 (5)C2—C3—C6—O2−154.4 (5)
O9—Ce—O3ii—C7ii54.3 (5)C4—C3—C6—O1−152.3 (4)
N1—Ce—O3ii—C7ii−169.8 (5)C4—C3—C6—O226.3 (6)
O4—Ce—O1i—C6i131.6 (5)O5—C8—C8iii—O5iii−180.0 (5)
O5—Ce—O1i—C6i−154.8 (4)O5—C8—C8iii—O6iii−0.9 (6)
O7—Ce—O1i—C6i−85.4 (5)O6—C8—C8iii—O5iii0.9 (6)
O8—Ce—O1i—C6i60.0 (6)O6—C8—C8iii—O6iii180.0 (4)
O9—Ce—O1i—C6i−54.6 (5)
D—H···AD—HH···AD···AD—H···A
O7—H7A···O4ii0.862.032.879 (6)171.00
O7—H7B···O10v0.831.842.569 (10)146.00
O8—H8A···O6vi0.922.002.910 (5)170.00
O8—H8B···O2vii0.861.842.655 (6)159.00
O9—H9A···O6vi0.992.012.987 (6)169.00
O9—H9B···O100.841.932.440 (10)118.00
O10—H10A···O5ii0.842.122.844 (9)143.00
O10—H10A···O8ii0.842.392.913 (10)121.00
O10—H10B···O9viii0.941.632.501 (11)153.00
C5—H5A···O3ii0.932.463.131 (5)129.
Table 1

Selected bond lengths (Å)

Ce—N12.684 (3)
Ce—O1i2.409 (4)
Ce—O3ii2.505 (3)
Ce—O42.511 (3)
Ce—O52.508 (3)
Ce—O6iii2.515 (3)
Ce—O72.568 (5)
Ce—O82.515 (4)
Ce—O92.582 (5)

Symmetry codes: (i) ; (ii) ; (iii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O7—H7A⋯O4ii0.862.032.879 (6)171
O7—H7B⋯O10iv0.831.842.569 (10)146
O8—H8A⋯O6v0.922.002.910 (5)170
O8—H8B⋯O2vi0.861.842.655 (6)159
O9—H9A⋯O6v0.992.012.987 (6)169
O9—H9B⋯O100.841.932.440 (10)118
O10—H10A⋯O5ii0.842.122.844 (9)143
O10—H10A⋯O8ii0.842.392.913 (10)121
O10—H10B⋯O9vii0.941.632.501 (11)153
C5—H5A⋯O3ii0.932.463.131 (5)129

Symmetry codes: (ii) ; (iv) ; (v) ; (vi) ; (vii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  catena-Poly[diammonium [diaqua-bis(pyridine-2,4-dicarboxyl-ato-κN,O)cuprate(II)] [[diaqua-copper(II)]-μ-pyridine-2,4-dicarboxyl-ato-κN,O:O-[tetra-aqua-cadmium(II)]-μ-pyridine-2,4-dicarboxyl-ato-κO:N,O] hexa-hydrate].

Authors:  Guan-Hua Wang; Zhi-Gang Li; Heng-Qing Jia; Ning-Hai Hu; Jing-Wei Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-14

3.  Bis(1-methyl-4-oxoimidazolidin-2-iminium) diaqua-bis-(pyridine-2,4-dicarboxyl-ato-κN,O)zincate(II) dihydrate.

Authors:  Hossein Aghabozorg; Fatemeh Jafarbak; Masoud Mirzaei; Behrouz Notash
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12

4.  Poly[[hexa-aqua-(μ(2)-oxalato-κO,O:O,O)bis-(μ(3)-pyridine-2,4-dicarboxyl-ato-κN,O:O:O)dilanthanum(III)] monohydrate].

Authors:  Fwu Ming Shen; Shie Fu Lush
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  1 in total

1.  catena-Poly[[(ethane-diol-κ²O,O')zinc]-μ-oxalato-κ⁴O¹,O²:O¹',O²'].

Authors:  Zheng-De Tan; Feng-Jiao Tan; Bo Tan; Cheng-Ming Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-02
  1 in total

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