Literature DB >> 22249966

Visualizing the operating range of a classification system.

George Hripcsak1.   

Abstract

The performance of a classification system depends on the context in which it will be used, including the prevalence of the classes and the relative costs of different types of errors. Metrics such as accuracy are limited to the context in which the experiment was originally carried out, and metrics such as sensitivity, specificity, and receiver operating characteristic area--while independent of prevalence--do not provide a clear picture of the performance characteristics of the system over different contexts. Graphing a prevalence-specific metric such as F-measure or the relative cost of errors over a wide range of prevalence allows a visualization of the performance of the system and a comparison of systems in different contexts.

Mesh:

Year:  2012        PMID: 22249966      PMCID: PMC3384121          DOI: 10.1136/amiajnl-2011-000633

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  12 in total

1.  Basic principles of ROC analysis.

Authors:  C E Metz
Journal:  Semin Nucl Med       Date:  1978-10       Impact factor: 4.446

2.  Measuring agreement between two judges on the presence or absence of a trait.

Authors:  J L Fleiss
Journal:  Biometrics       Date:  1975-09       Impact factor: 2.571

Review 3.  Measuring agreement in medical informatics reliability studies.

Authors:  George Hripcsak; Daniel F Heitjan
Journal:  J Biomed Inform       Date:  2002-04       Impact factor: 6.317

4.  Agreement, the f-measure, and reliability in information retrieval.

Authors:  George Hripcsak; Adam S Rothschild
Journal:  J Am Med Inform Assoc       Date:  2005-01-31       Impact factor: 4.497

5.  Automated detection of adverse events using natural language processing of discharge summaries.

Authors:  Genevieve B Melton; George Hripcsak
Journal:  J Am Med Inform Assoc       Date:  2005-03-31       Impact factor: 4.497

6.  Text mining for the Vaccine Adverse Event Reporting System: medical text classification using informative feature selection.

Authors:  Taxiarchis Botsis; Michael D Nguyen; Emily Jane Woo; Marianthi Markatou; Robert Ball
Journal:  J Am Med Inform Assoc       Date:  2011-06-27       Impact factor: 4.497

7.  The application of naive Bayes model averaging to predict Alzheimer's disease from genome-wide data.

Authors:  Wei Wei; Shyam Visweswaran; Gregory F Cooper
Journal:  J Am Med Inform Assoc       Date:  2011 Jul-Aug       Impact factor: 4.497

8.  The meaning and use of the area under a receiver operating characteristic (ROC) curve.

Authors:  J A Hanley; B J McNeil
Journal:  Radiology       Date:  1982-04       Impact factor: 11.105

9.  ROC analysis applied to the evaluation of medical imaging techniques.

Authors:  J A Swets
Journal:  Invest Radiol       Date:  1979 Mar-Apr       Impact factor: 6.016

10.  Search filters to identify geriatric medicine in Medline.

Authors:  Esther M M van de Glind; Barbara C van Munster; René Spijker; Rob J P M Scholten; Lotty Hooft
Journal:  J Am Med Inform Assoc       Date:  2011-09-23       Impact factor: 4.497

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  2 in total

1.  Enhancing epidemiological surveillance of the emergence of the SARS-CoV-2 Omicron variant using spike gene target failure data, England, 15 November to 31 December 2021.

Authors:  Paula B Blomquist; Jessica Bridgen; Neil Bray; Anne Marie O'Connell; Daniel West; Natalie Groves; Eileen Gallagher; Lara Utsi; Christopher I Jarvis; Jo L Hardstaff; Chloe Byers; Soeren Metelmann; David Simons; Asad Zaidi; Katherine A Twohig; Bethan Savagar; Alessandra Løchen; Cian Ryan; Katie Wrenn; María Saavedra-Campos; Zahidul Abedin; Isaac Florence; Paul Cleary; Richard Elson; Roberto Vivancos; Iain R Lake
Journal:  Euro Surveill       Date:  2022-03

2.  Prevalence and Predictability of Low-Yield Inpatient Laboratory Diagnostic Tests.

Authors:  Song Xu; Jason Hom; Santhosh Balasubramanian; Lee F Schroeder; Nader Najafi; Shivaal Roy; Jonathan H Chen
Journal:  JAMA Netw Open       Date:  2019-09-04
  2 in total

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