Literature DB >> 22225804

Molecular dynamics simulation of shear- and stretch-induced dissociation of P-selectin/PSGL-1 complex.

Yingyong Kang1, Shouqin Lü, Peng Ren, Bo Huo, Mian Long.   

Abstract

By mediating the tethering and rolling of leukocytes on vascular surfaces, the interactions between P-selectin and the P-selectin glycoprotein ligand 1 (PSGL-1) play crucial roles during inflammation cascade. Tensile stretch produced by rolling leukocytes and shear stress exerted by blood flow constitute the two types of mechanical forces that act on the P-selectin/PSGL-1 bond. These forces modulate not only dissociation kinetics of this bond, but also the leukocyte adhesion dynamics. However, the respective contribution of the two forces to bond dissociation and to the corresponding microstructural bases remains unclear. To mimic the mechanical microenvironment, we developed two molecular dynamics approaches; namely, an approach involving the shear flow field with a controlled velocity gradient, and the track dragging approach with a defined trajectory. With each approach or with both combined, we investigate the microstructural evolution and dissociation kinetics of the P-LE/SGP-3 construct, which is the smallest functional unit of the P-selectin/PSGL-1 complex. The results demonstrate that both shear flow and tensile stretch play important roles in the collapse of the construct and that, before bond dissociation, the former causes more destruction of domains within the construct than the latter. Dissociation of the P-LE/SGP-3 construct features intramolecular destruction of the epidermal-growth-factor (EGF) domain and the breaking of hydrogen-bond clusters at the P-selectin-lectin/EGF interface. Thus, to better understand how mechanics impacts the dissociation kinetics of the P-selectin/PSGL-1 complex, we propose herein two approaches to mimic its physiological mechanical environment.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22225804      PMCID: PMC3250688          DOI: 10.1016/j.bpj.2011.11.4002

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

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2.  A structure-based sliding-rebinding mechanism for catch bonds.

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Journal:  Biophys J       Date:  2006-12-01       Impact factor: 4.033

Review 3.  Mechanisms for flow-enhanced cell adhesion.

Authors:  Cheng Zhu; Tadayuki Yago; Jizhong Lou; Veronika I Zarnitsyna; Rodger P McEver
Journal:  Ann Biomed Eng       Date:  2008-02-26       Impact factor: 3.934

4.  Implementation of Lees-Edwards periodic boundary conditions for direct numerical simulations of particle dispersions under shear flow.

Authors:  Hideki Kobayashi; Ryoichi Yamamoto
Journal:  J Chem Phys       Date:  2011-02-14       Impact factor: 3.488

5.  Cloning of GMP-140, a granule membrane protein of platelets and endothelium: sequence similarity to proteins involved in cell adhesion and inflammation.

Authors:  G I Johnston; R G Cook; R P McEver
Journal:  Cell       Date:  1989-03-24       Impact factor: 41.582

6.  Molecular dynamics study of tethered polymers in shear flow.

Authors:  Y Gratton; G W Slater
Journal:  Eur Phys J E Soft Matter       Date:  2005-08-29       Impact factor: 1.890

7.  Static and dynamic lengths of neutrophil microvilli.

Authors:  J Y Shao; H P Ting-Beall; R M Hochmuth
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

8.  Direct observation of membrane tethers formed during neutrophil attachment to platelets or P-selectin under physiological flow.

Authors:  D W Schmidtke; S L Diamond
Journal:  J Cell Biol       Date:  2000-05-01       Impact factor: 10.539

9.  P-selectin glycoprotein ligand-1 mediates rolling of human neutrophils on P-selectin.

Authors:  K L Moore; K D Patel; R E Bruehl; F Li; D A Johnson; H S Lichenstein; R D Cummings; D F Bainton; R P McEver
Journal:  J Cell Biol       Date:  1995-02       Impact factor: 10.539

10.  Distinct molecular and cellular contributions to stabilizing selectin-mediated rolling under flow.

Authors:  Tadayuki Yago; Anne Leppänen; Haiying Qiu; Warren D Marcus; Matthias U Nollert; Cheng Zhu; Richard D Cummings; Rodger P McEver
Journal:  J Cell Biol       Date:  2002-08-12       Impact factor: 10.539

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  4 in total

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Review 2.  Mechanomics: an emerging field between biology and biomechanics.

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Journal:  Protein Cell       Date:  2014-04-23       Impact factor: 14.870

3.  Comparison of human and mouse E-selectin binding to Sialyl-Lewis(x).

Authors:  Anne D Rocheleau; Thong M Cao; Tait Takitani; Michael R King
Journal:  BMC Struct Biol       Date:  2016-07-02

4.  Accelerating Reaction Rates of Biomolecules by Using Shear Stress in Artificial Capillary Systems.

Authors:  Tuuli A Hakala; Emma V Yates; Pavan K Challa; Zenon Toprakcioglu; Karthik Nadendla; Dijana Matak-Vinkovic; Christopher M Dobson; Rodrigo Martínez; Francisco Corzana; Tuomas P J Knowles; Gonçalo J L Bernardes
Journal:  J Am Chem Soc       Date:  2021-10-04       Impact factor: 15.419

  4 in total

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