| Literature DB >> 22220129 |
Adnan A Kadi, Amer M Alanzi, Ali A El-Emam, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title mol-ecule, C(15)H(18)N(2)OS, a small twist is noted, with the dihedral angle between the central carbohydrazone residue (r.m.s. deviation = 0.029 Å) and the thio-phene ring being 12.47 (10)°. The syn arrangement of the amide H and carbonyl O atoms allows for the formation of centrosymmetric dimers via N-H⋯O hydrogen bonds. These are linked in the three-dimensional structure by C-H⋯π inter-actions. The thio-phene ring is disordered over two co-planar orientations, the major component having a site-occupancy factor of 0.833 (2).Entities:
Year: 2011 PMID: 22220129 PMCID: PMC3247511 DOI: 10.1107/S1600536811044758
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H18N2OS | |
| Monoclinic, | Cu |
| Hall symbol: -C 2yc | Cell parameters from 4116 reflections |
| θ = 3.3–76.3° | |
| µ = 2.01 mm−1 | |
| β = 102.473 (1)° | Prism, colourless |
| 0.30 × 0.25 × 0.20 mm | |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 2849 independent reflections |
| Radiation source: SuperNova (Cu) X-ray Source | 2671 reflections with |
| Mirror | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 76.5°, θmin = 4.4° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 5687 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2849 reflections | (Δ/σ)max = 0.001 |
| 189 parameters | Δρmax = 0.38 e Å−3 |
| 10 restraints | Δρmin = −0.39 e Å−3 |
| Occ. (<1) | |||||
| S1 | 0.32529 (2) | 0.46310 (4) | 0.24150 (3) | 0.01360 (14) | 0.833 (2) |
| C1 | 0.26341 (15) | 0.55387 (19) | 0.1659 (2) | 0.0172 (5) | 0.833 (2) |
| H1A | 0.2777 | 0.5884 | 0.1098 | 0.021* | 0.833 (2) |
| C2 | 0.1909 (2) | 0.5709 (3) | 0.1958 (2) | 0.0187 (4) | 0.833 (2) |
| H2 | 0.1493 | 0.6191 | 0.1646 | 0.022* | 0.833 (2) |
| C3 | 0.18762 (10) | 0.5073 (2) | 0.2781 (2) | 0.0223 (5) | 0.833 (2) |
| H3 | 0.1417 | 0.5081 | 0.3088 | 0.027* | 0.833 (2) |
| S1' | 0.16790 (19) | 0.5096 (3) | 0.2790 (2) | 0.01360 (14) | 0.167 (2) |
| C1' | 0.2016 (12) | 0.5693 (15) | 0.1820 (12) | 0.0172 (5) | 0.167 (2) |
| H1' | 0.1703 | 0.6204 | 0.1384 | 0.021* | 0.167 (2) |
| C2' | 0.2765 (11) | 0.5375 (13) | 0.1731 (14) | 0.0187 (4) | 0.167 (2) |
| H2' | 0.3044 | 0.5617 | 0.1234 | 0.022* | 0.167 (2) |
| C3' | 0.3071 (7) | 0.4624 (12) | 0.2493 (10) | 0.0223 (5) | 0.167 (2) |
| H3' | 0.3588 | 0.4285 | 0.2565 | 0.027* | 0.167 (2) |
| O1 | 0.19394 (5) | 0.34953 (7) | 0.42862 (7) | 0.0180 (2) | |
| N1 | 0.32838 (6) | 0.32219 (8) | 0.44331 (8) | 0.0143 (2) | |
| H1 | 0.3254 (10) | 0.2681 (13) | 0.4887 (12) | 0.023 (4)* | |
| N2 | 0.39858 (6) | 0.33902 (8) | 0.40601 (7) | 0.0147 (2) | |
| C4 | 0.25352 (7) | 0.44346 (9) | 0.31283 (8) | 0.0135 (2) | |
| C5 | 0.25708 (7) | 0.36818 (9) | 0.39748 (9) | 0.0137 (2) | |
| C6 | 0.46677 (7) | 0.30469 (9) | 0.45855 (9) | 0.0137 (2) | |
| C7 | 0.54146 (7) | 0.31718 (10) | 0.41432 (9) | 0.0172 (3) | |
| H7 | 0.5274 | 0.3575 | 0.3493 | 0.021* | |
| C8 | 0.57170 (8) | 0.20454 (11) | 0.39590 (10) | 0.0216 (3) | |
| H8A | 0.5290 | 0.1666 | 0.3464 | 0.026* | |
| H8B | 0.6214 | 0.2095 | 0.3676 | 0.026* | |
| C9 | 0.59118 (7) | 0.14246 (10) | 0.49565 (10) | 0.0194 (3) | |
| H9 | 0.6107 | 0.0694 | 0.4835 | 0.023* | |
| C10 | 0.51402 (7) | 0.13459 (10) | 0.53943 (10) | 0.0195 (3) | |
| H10A | 0.5265 | 0.0941 | 0.6035 | 0.023* | |
| H10B | 0.4706 | 0.0962 | 0.4914 | 0.023* | |
| C11 | 0.48369 (7) | 0.24706 (10) | 0.55881 (9) | 0.0147 (2) | |
| H11 | 0.4329 | 0.2428 | 0.5862 | 0.018* | |
| C12 | 0.55174 (7) | 0.30665 (11) | 0.63301 (9) | 0.0193 (3) | |
| H12A | 0.5328 | 0.3792 | 0.6449 | 0.023* | |
| H12B | 0.5644 | 0.2687 | 0.6985 | 0.023* | |
| C13 | 0.62905 (7) | 0.31363 (10) | 0.58972 (9) | 0.0177 (3) | |
| H13 | 0.6731 | 0.3514 | 0.6388 | 0.021* | |
| C14 | 0.60877 (7) | 0.37598 (10) | 0.49038 (10) | 0.0196 (3) | |
| H14A | 0.6585 | 0.3830 | 0.4623 | 0.024* | |
| H14B | 0.5897 | 0.4483 | 0.5028 | 0.024* | |
| C15 | 0.65806 (7) | 0.20126 (10) | 0.57098 (9) | 0.0184 (3) | |
| H15A | 0.6712 | 0.1615 | 0.6355 | 0.022* | |
| H15B | 0.7084 | 0.2056 | 0.5439 | 0.022* |
| S1 | 0.0146 (3) | 0.0164 (2) | 0.0113 (2) | −0.00024 (18) | 0.00607 (15) | 0.00223 (12) |
| C1 | 0.0211 (13) | 0.0172 (11) | 0.0118 (8) | 0.0019 (8) | 0.0004 (8) | 0.0070 (7) |
| C2 | 0.0190 (12) | 0.0181 (7) | 0.0184 (12) | 0.0026 (7) | 0.0026 (6) | 0.0013 (8) |
| C3 | 0.0147 (11) | 0.0256 (8) | 0.0287 (8) | −0.0040 (10) | 0.0096 (9) | −0.0030 (7) |
| S1' | 0.0146 (3) | 0.0164 (2) | 0.0113 (2) | −0.00024 (18) | 0.00607 (15) | 0.00223 (12) |
| C1' | 0.0211 (13) | 0.0172 (11) | 0.0118 (8) | 0.0019 (8) | 0.0004 (8) | 0.0070 (7) |
| C2' | 0.0190 (12) | 0.0181 (7) | 0.0184 (12) | 0.0026 (7) | 0.0026 (6) | 0.0013 (8) |
| C3' | 0.0147 (11) | 0.0256 (8) | 0.0287 (8) | −0.0040 (10) | 0.0096 (9) | −0.0030 (7) |
| O1 | 0.0134 (4) | 0.0194 (4) | 0.0217 (4) | 0.0002 (3) | 0.0053 (3) | 0.0062 (3) |
| N1 | 0.0125 (5) | 0.0153 (5) | 0.0153 (5) | 0.0001 (4) | 0.0036 (4) | 0.0035 (4) |
| N2 | 0.0139 (5) | 0.0153 (5) | 0.0159 (5) | 0.0005 (4) | 0.0052 (4) | 0.0016 (4) |
| C4 | 0.0149 (5) | 0.0128 (5) | 0.0125 (5) | −0.0014 (4) | 0.0024 (4) | −0.0010 (4) |
| C5 | 0.0141 (5) | 0.0118 (5) | 0.0147 (5) | −0.0010 (4) | 0.0021 (4) | −0.0015 (4) |
| C6 | 0.0149 (5) | 0.0128 (5) | 0.0138 (5) | 0.0000 (4) | 0.0041 (4) | 0.0006 (4) |
| C7 | 0.0160 (6) | 0.0213 (6) | 0.0160 (6) | 0.0026 (4) | 0.0068 (4) | 0.0059 (5) |
| C8 | 0.0214 (6) | 0.0266 (7) | 0.0176 (6) | 0.0041 (5) | 0.0062 (5) | −0.0034 (5) |
| C9 | 0.0187 (6) | 0.0145 (6) | 0.0249 (6) | 0.0031 (4) | 0.0045 (5) | 0.0001 (5) |
| C10 | 0.0167 (6) | 0.0152 (6) | 0.0251 (6) | −0.0025 (4) | 0.0009 (5) | 0.0059 (5) |
| C11 | 0.0115 (5) | 0.0189 (6) | 0.0141 (5) | −0.0009 (4) | 0.0035 (4) | 0.0040 (4) |
| C12 | 0.0155 (6) | 0.0274 (7) | 0.0148 (6) | −0.0014 (5) | 0.0029 (5) | −0.0027 (5) |
| C13 | 0.0130 (5) | 0.0202 (6) | 0.0196 (6) | −0.0035 (4) | 0.0028 (4) | −0.0011 (5) |
| C14 | 0.0153 (5) | 0.0161 (6) | 0.0289 (7) | −0.0009 (4) | 0.0081 (5) | 0.0051 (5) |
| C15 | 0.0132 (5) | 0.0204 (6) | 0.0215 (6) | 0.0012 (4) | 0.0037 (5) | 0.0060 (5) |
| S1—C4 | 1.7142 (12) | C7—C8 | 1.5415 (18) |
| S1—C1 | 1.7215 (15) | C7—C14 | 1.5412 (17) |
| C1—C2 | 1.377 (2) | C7—H7 | 1.0000 |
| C1—H1A | 0.9500 | C8—C9 | 1.5340 (18) |
| C2—C3 | 1.382 (3) | C8—H8A | 0.9900 |
| C2—H2 | 0.9500 | C8—H8B | 0.9900 |
| C3—C4 | 1.362 (2) | C9—C15 | 1.5319 (17) |
| C3—H3 | 0.9500 | C9—C10 | 1.5358 (17) |
| S1'—C4 | 1.634 (3) | C9—H9 | 1.0000 |
| S1'—C1' | 1.712 (9) | C10—C11 | 1.5432 (17) |
| C1'—C2' | 1.344 (9) | C10—H10A | 0.9900 |
| C1'—H1' | 0.9500 | C10—H10B | 0.9900 |
| C2'—C3' | 1.411 (10) | C11—C12 | 1.5406 (16) |
| C2'—H2' | 0.9500 | C11—H11 | 1.0000 |
| C3'—C4 | 1.391 (8) | C12—C13 | 1.5336 (16) |
| C3'—H3' | 0.9500 | C12—H12A | 0.9900 |
| O1—C5 | 1.2414 (14) | C12—H12B | 0.9900 |
| N1—C5 | 1.3499 (15) | C13—C14 | 1.5313 (17) |
| N1—N2 | 1.3912 (13) | C13—C15 | 1.5321 (17) |
| N1—H1 | 0.926 (17) | C13—H13 | 1.0000 |
| N2—C6 | 1.2820 (15) | C14—H14A | 0.9900 |
| C4—C5 | 1.4784 (16) | C14—H14B | 0.9900 |
| C6—C7 | 1.5062 (15) | C15—H15A | 0.9900 |
| C6—C11 | 1.5118 (15) | C15—H15B | 0.9900 |
| C4—S1—C1 | 91.53 (11) | C7—C8—H8A | 109.7 |
| C2—C1—S1 | 112.5 (3) | C9—C8—H8B | 109.7 |
| C2—C1—H1A | 123.7 | C7—C8—H8B | 109.7 |
| S1—C1—H1A | 123.7 | H8A—C8—H8B | 108.2 |
| C1—C2—C3 | 109.8 (3) | C15—C9—C8 | 109.14 (10) |
| C1—C2—H2 | 125.1 | C15—C9—C10 | 109.09 (10) |
| C3—C2—H2 | 125.1 | C8—C9—C10 | 109.70 (10) |
| C4—C3—C2 | 116.73 (19) | C15—C9—H9 | 109.6 |
| C4—C3—H3 | 121.6 | C8—C9—H9 | 109.6 |
| C2—C3—H3 | 121.6 | C10—C9—H9 | 109.6 |
| C4—S1'—C1' | 91.4 (7) | C9—C10—C11 | 109.97 (10) |
| C2'—C1'—S1' | 114.0 (15) | C9—C10—H10A | 109.7 |
| C2'—C1'—H1' | 123.0 | C11—C10—H10A | 109.7 |
| S1'—C1'—H1' | 123.0 | C9—C10—H10B | 109.7 |
| C1'—C2'—C3' | 109.4 (17) | C11—C10—H10B | 109.7 |
| C1'—C2'—H2' | 125.3 | H10A—C10—H10B | 108.2 |
| C3'—C2'—H2' | 125.3 | C6—C11—C12 | 108.82 (10) |
| C4—C3'—C2' | 112.8 (12) | C6—C11—C10 | 106.87 (10) |
| C4—C3'—H3' | 123.6 | C12—C11—C10 | 109.43 (10) |
| C2'—C3'—H3' | 123.6 | C6—C11—H11 | 110.5 |
| C5—N1—N2 | 119.91 (10) | C12—C11—H11 | 110.5 |
| C5—N1—H1 | 116.8 (10) | C10—C11—H11 | 110.5 |
| N2—N1—H1 | 121.6 (10) | C13—C12—C11 | 110.07 (10) |
| C6—N2—N1 | 117.79 (10) | C13—C12—H12A | 109.6 |
| C3—C4—C3' | 105.5 (6) | C11—C12—H12A | 109.6 |
| C3—C4—C5 | 122.63 (13) | C13—C12—H12B | 109.6 |
| C3'—C4—C5 | 131.8 (6) | C11—C12—H12B | 109.6 |
| C3'—C4—S1' | 112.5 (6) | H12A—C12—H12B | 108.2 |
| C5—C4—S1' | 115.42 (13) | C14—C13—C15 | 110.10 (10) |
| C3—C4—S1 | 109.44 (12) | C14—C13—C12 | 108.72 (10) |
| C5—C4—S1 | 127.90 (9) | C15—C13—C12 | 109.52 (10) |
| S1'—C4—S1 | 116.54 (13) | C14—C13—H13 | 109.5 |
| O1—C5—N1 | 119.64 (10) | C15—C13—H13 | 109.5 |
| O1—C5—C4 | 119.35 (10) | C12—C13—H13 | 109.5 |
| N1—C5—C4 | 120.98 (10) | C13—C14—C7 | 109.52 (10) |
| N2—C6—C7 | 117.30 (10) | C13—C14—H14A | 109.8 |
| N2—C6—C11 | 129.20 (11) | C7—C14—H14A | 109.8 |
| C7—C6—C11 | 113.42 (9) | C13—C14—H14B | 109.8 |
| C6—C7—C8 | 107.35 (10) | C7—C14—H14B | 109.8 |
| C6—C7—C14 | 109.42 (10) | H14A—C14—H14B | 108.2 |
| C8—C7—C14 | 109.31 (10) | C13—C15—C9 | 110.08 (10) |
| C6—C7—H7 | 110.2 | C13—C15—H15A | 109.6 |
| C8—C7—H7 | 110.2 | C9—C15—H15A | 109.6 |
| C14—C7—H7 | 110.2 | C13—C15—H15B | 109.6 |
| C9—C8—C7 | 109.81 (10) | C9—C15—H15B | 109.6 |
| C9—C8—H8A | 109.7 | H15A—C15—H15B | 108.2 |
| C4—S1—C1—C2 | 1.5 (2) | S1—C4—C5—N1 | 15.62 (17) |
| S1—C1—C2—C3 | −1.4 (3) | N1—N2—C6—C7 | 176.23 (10) |
| C1—C2—C3—C4 | 0.4 (4) | N1—N2—C6—C11 | −0.37 (18) |
| C4—S1'—C1'—C2' | 1.7 (16) | N2—C6—C7—C8 | −115.56 (12) |
| S1'—C1'—C2'—C3' | −1(2) | C11—C6—C7—C8 | 61.57 (13) |
| C1'—C2'—C3'—C4 | −1(2) | N2—C6—C7—C14 | 125.92 (11) |
| C5—N1—N2—C6 | 171.74 (11) | C11—C6—C7—C14 | −56.95 (13) |
| C2—C3—C4—C3' | −0.8 (7) | C6—C7—C8—C9 | −58.56 (13) |
| C2—C3—C4—C5 | −177.5 (2) | C14—C7—C8—C9 | 60.04 (13) |
| C2—C3—C4—S1' | −161 (2) | C7—C8—C9—C15 | −60.03 (13) |
| C2—C3—C4—S1 | 0.8 (3) | C7—C8—C9—C10 | 59.45 (13) |
| C2'—C3'—C4—C3 | −0.4 (14) | C15—C9—C10—C11 | 59.76 (12) |
| C2'—C3'—C4—C5 | 175.8 (10) | C8—C9—C10—C11 | −59.75 (13) |
| C2'—C3'—C4—S1' | 2.4 (16) | N2—C6—C11—C12 | −126.71 (13) |
| C2'—C3'—C4—S1 | −160 (10) | C7—C6—C11—C12 | 56.58 (13) |
| C1'—S1'—C4—C3 | 18.8 (18) | N2—C6—C11—C10 | 115.21 (13) |
| C1'—S1'—C4—C3' | −2.3 (11) | C7—C6—C11—C10 | −61.49 (12) |
| C1'—S1'—C4—C5 | −176.8 (7) | C9—C10—C11—C6 | 58.68 (12) |
| C1'—S1'—C4—S1 | −0.8 (7) | C9—C10—C11—C12 | −58.99 (13) |
| C1—S1—C4—C3 | −1.28 (18) | C6—C11—C12—C13 | −57.90 (13) |
| C1—S1—C4—C3' | 19 (9) | C10—C11—C12—C13 | 58.55 (13) |
| C1—S1—C4—C5 | 176.83 (14) | C11—C12—C13—C14 | 61.27 (13) |
| C1—S1—C4—S1' | 1.40 (18) | C11—C12—C13—C15 | −59.07 (13) |
| N2—N1—C5—O1 | 177.15 (10) | C15—C13—C14—C7 | 59.00 (12) |
| N2—N1—C5—C4 | −4.97 (16) | C12—C13—C14—C7 | −60.97 (13) |
| C3—C4—C5—O1 | 11.4 (2) | C6—C7—C14—C13 | 58.13 (13) |
| C3'—C4—C5—O1 | −164.3 (9) | C8—C7—C14—C13 | −59.16 (13) |
| S1'—C4—C5—O1 | 9.0 (2) | C14—C13—C15—C9 | −59.43 (12) |
| S1—C4—C5—O1 | −166.49 (9) | C12—C13—C15—C9 | 60.06 (13) |
| C3—C4—C5—N1 | −166.50 (17) | C8—C9—C15—C13 | 59.55 (13) |
| C3'—C4—C5—N1 | 17.8 (9) | C10—C9—C15—C13 | −60.30 (13) |
| S1'—C4—C5—N1 | −168.90 (17) |
| Cg1 is the centroid of the S1,C1–C4 ring. |
| H··· | ||||
| N1—H1···O1i | 0.93 (2) | 1.92 (2) | 2.844 (1) | 173 (2) |
| C13—H13···Cg1ii | 1.00 | 2.61 | 3.5791 (16) | 163 |
| C15—H15a···Cg1iii | 0.99 | 2.69 | 3.5683 (16) | 148 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the S1,C1–C4 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1i | 0.93 (2) | 1.92 (2) | 2.844 (1) | 173 (2) |
| C13—H13⋯ | 1.00 | 2.61 | 3.5791 (16) | 163 |
| C15—H15a⋯ | 0.99 | 2.69 | 3.5683 (16) | 148 |
Symmetry codes: (i) ; (ii) ; (iii) .