Literature DB >> 22220073

N,N'-Bis(pyridin-3-yl)terephthalamide-terephthalic acid (1/1).

Ji-Lin Lu1, Xue-Wen Liu, Lin Li, Yuan-Dao Chen, Guang-Yu Shen.   

Abstract

In the title compound, C(18)H(14)N(4)O(2)·C(8)H(6)O(4), both types of mol-ecule lie on inversion centers. In the N,N'-bis-(pyridin-3-yl)terephthalamide mol-ecule, the pyridine ring forms a dihedral angle of 11.33 (9)° with the central benzene ring. In the crystal, N-H⋯O and O-H⋯N hydrogen bonds connect the components into a three-dimensional network.

Entities:  

Year:  2011        PMID: 22220073      PMCID: PMC3247455          DOI: 10.1107/S1600536811041596

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Xiao et al. (2011 ▶), Wang et al. (2009 ▶).

Experimental

Crystal data

C18H14N4O2·C8H6O4 M = 484.46 Monoclinic, a = 11.0001 (3) Å b = 10.8080 (2) Å c = 9.6903 (2) Å β = 106.830 (2)° V = 1102.73 (4) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 296 K 0.25 × 0.24 × 0.22 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SABADS; Sheldrick, 1996) ▶ T min = 0.974, T max = 0.977 8117 measured reflections 1939 independent reflections 1640 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.095 S = 1.07 1939 reflections 171 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811041596/lh5338sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811041596/lh5338Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811041596/lh5338Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H14N4O2·C8H6O4F(000) = 504
Mr = 484.46Dx = 1.459 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2279 reflections
a = 11.0001 (3) Åθ = 2.7–25.2°
b = 10.8080 (2) ŵ = 0.11 mm1
c = 9.6903 (2) ÅT = 296 K
β = 106.830 (2)°Block, colourless
V = 1102.73 (4) Å30.25 × 0.24 × 0.22 mm
Z = 2
Bruker SMART CCD diffractometer1939 independent reflections
Radiation source: fine-focus sealed tube1640 reflections with I > 2σ(I)
graphiteRint = 0.035
φ and ω scansθmax = 25.0°, θmin = 1.9°
Absorption correction: multi-scan (SABADS; Sheldrick, 1996)h = −13→12
Tmin = 0.974, Tmax = 0.977k = −12→11
8117 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0378P)2 + 0.3019P] where P = (Fo2 + 2Fc2)/3
1939 reflections(Δ/σ)max < 0.001
171 parametersΔρmax = 0.14 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C100.91350 (16)1.01651 (17)0.18960 (19)0.0385 (4)
C110.95943 (16)1.00643 (16)0.35009 (18)0.0358 (4)
C80.58897 (16)0.45790 (15)0.62372 (17)0.0336 (4)
H80.64890.43020.70680.040*
C70.54563 (16)0.37897 (14)0.50665 (16)0.0308 (4)
C50.74809 (16)0.04149 (16)0.79727 (18)0.0367 (4)
H50.75800.10280.86710.044*
C30.66694 (17)−0.02113 (16)0.55212 (18)0.0381 (4)
H30.6219−0.00580.45650.046*
C60.59441 (16)0.25022 (15)0.50444 (17)0.0339 (4)
C90.45681 (17)0.42247 (15)0.38296 (17)0.0351 (4)
H90.42790.37040.30380.042*
C121.01793 (16)0.89971 (16)0.41856 (19)0.0388 (4)
H121.03040.83260.36420.047*
C40.68076 (15)0.06989 (15)0.65646 (17)0.0313 (4)
C130.94247 (17)1.10642 (16)0.43264 (19)0.0399 (4)
H130.90411.17820.38740.048*
C20.72163 (18)−0.13483 (16)0.5939 (2)0.0429 (5)
H20.7154−0.19710.52590.051*
C10.78552 (18)−0.15624 (17)0.7362 (2)0.0460 (5)
H10.8204−0.23410.76300.055*
N10.79926 (14)−0.06916 (14)0.83764 (15)0.0423 (4)
N20.62725 (14)0.18931 (13)0.63090 (14)0.0338 (3)
H2N0.6221 (18)0.2299 (18)0.709 (2)0.048 (5)*
O10.60228 (13)0.20383 (11)0.39151 (12)0.0476 (4)
O20.91449 (14)0.91030 (12)0.12264 (15)0.0524 (4)
H1N0.874 (3)0.918 (3)0.016 (3)0.095 (9)*
O30.87627 (13)1.11288 (12)0.12828 (13)0.0501 (4)
U11U22U33U12U13U23
C100.0381 (9)0.0349 (10)0.0398 (10)−0.0038 (8)0.0069 (8)0.0027 (8)
C110.0364 (9)0.0332 (10)0.0353 (9)−0.0037 (7)0.0063 (7)0.0034 (7)
C80.0435 (9)0.0310 (9)0.0255 (8)0.0035 (7)0.0086 (7)0.0045 (7)
C70.0437 (9)0.0256 (9)0.0255 (8)0.0017 (7)0.0136 (7)0.0033 (7)
C50.0458 (10)0.0313 (10)0.0321 (9)0.0041 (8)0.0100 (8)0.0008 (7)
C30.0485 (10)0.0328 (10)0.0317 (9)0.0024 (8)0.0094 (8)−0.0004 (7)
C60.0472 (10)0.0294 (9)0.0273 (9)0.0014 (7)0.0143 (7)0.0014 (7)
C90.0514 (10)0.0279 (9)0.0258 (8)0.0002 (7)0.0109 (8)−0.0011 (7)
C120.0434 (10)0.0313 (9)0.0388 (10)−0.0002 (8)0.0072 (8)−0.0022 (8)
C40.0384 (9)0.0259 (9)0.0311 (9)0.0028 (7)0.0123 (7)0.0026 (7)
C130.0430 (10)0.0312 (10)0.0408 (10)0.0023 (8)0.0047 (8)0.0036 (8)
C20.0539 (11)0.0282 (10)0.0452 (11)0.0045 (8)0.0122 (9)−0.0059 (8)
C10.0530 (11)0.0311 (10)0.0509 (12)0.0092 (8)0.0105 (9)0.0034 (9)
N10.0493 (9)0.0362 (9)0.0377 (8)0.0086 (7)0.0066 (7)0.0049 (7)
N20.0533 (9)0.0253 (8)0.0241 (7)0.0066 (6)0.0132 (6)0.0012 (6)
O10.0845 (10)0.0333 (7)0.0306 (7)0.0124 (6)0.0255 (6)0.0033 (5)
O20.0773 (10)0.0365 (8)0.0357 (8)0.0039 (7)0.0044 (7)0.0003 (6)
O30.0656 (9)0.0373 (8)0.0401 (7)0.0025 (6)0.0037 (6)0.0063 (6)
C10—O31.210 (2)C6—O11.2293 (19)
C10—O21.320 (2)C6—N21.345 (2)
C10—C111.494 (2)C9—C8i1.382 (2)
C11—C131.389 (2)C9—H90.9300
C11—C121.392 (2)C12—C13ii1.382 (2)
C8—C9i1.382 (2)C12—H120.9300
C8—C71.389 (2)C4—N21.410 (2)
C8—H80.9300C13—C12ii1.382 (2)
C7—C91.391 (2)C13—H130.9300
C7—C61.494 (2)C2—C11.374 (3)
C5—N11.331 (2)C2—H20.9300
C5—C41.385 (2)C1—N11.337 (2)
C5—H50.9300C1—H10.9300
C3—C21.377 (2)N2—H2N0.89 (2)
C3—C41.387 (2)O2—H1N1.00 (3)
C3—H30.9300
O3—C10—O2123.83 (16)C8i—C9—H9119.6
O3—C10—C11122.57 (16)C7—C9—H9119.6
O2—C10—C11113.58 (15)C13ii—C12—C11119.97 (16)
C13—C11—C12119.40 (16)C13ii—C12—H12120.0
C13—C11—C10118.80 (15)C11—C12—H12120.0
C12—C11—C10121.80 (16)C5—C4—C3118.38 (15)
C9i—C8—C7120.14 (15)C5—C4—N2116.91 (15)
C9i—C8—H8119.9C3—C4—N2124.68 (15)
C7—C8—H8119.9C12ii—C13—C11120.63 (16)
C8—C7—C9119.05 (15)C12ii—C13—H13119.7
C8—C7—C6122.97 (14)C11—C13—H13119.7
C9—C7—C6117.92 (14)C1—C2—C3119.90 (17)
N1—C5—C4123.26 (16)C1—C2—H2120.1
N1—C5—H5118.4C3—C2—H2120.1
C4—C5—H5118.4N1—C1—C2122.36 (17)
C2—C3—C4118.19 (16)N1—C1—H1118.8
C2—C3—H3120.9C2—C1—H1118.8
C4—C3—H3120.9C5—N1—C1117.91 (15)
O1—C6—N2122.81 (16)C6—N2—C4126.60 (14)
O1—C6—C7120.72 (14)C6—N2—H2N117.7 (12)
N2—C6—C7116.47 (14)C4—N2—H2N115.4 (12)
C8i—C9—C7120.81 (15)C10—O2—H1N111.7 (16)
O3—C10—C11—C139.3 (3)N1—C5—C4—C3−0.6 (3)
O2—C10—C11—C13−169.05 (16)N1—C5—C4—N2177.29 (16)
O3—C10—C11—C12−171.05 (17)C2—C3—C4—C5−0.4 (2)
O2—C10—C11—C1210.6 (2)C2—C3—C4—N2−178.11 (16)
C9i—C8—C7—C90.6 (3)C12—C11—C13—C12ii−0.6 (3)
C9i—C8—C7—C6177.70 (15)C10—C11—C13—C12ii179.14 (16)
C8—C7—C6—O1−146.83 (17)C4—C3—C2—C11.3 (3)
C9—C7—C6—O130.4 (2)C3—C2—C1—N1−1.3 (3)
C8—C7—C6—N233.8 (2)C4—C5—N1—C10.6 (3)
C9—C7—C6—N2−149.04 (16)C2—C1—N1—C50.3 (3)
C8—C7—C9—C8i−0.6 (3)O1—C6—N2—C43.8 (3)
C6—C7—C9—C8i−177.85 (15)C7—C6—N2—C4−176.86 (15)
C13—C11—C12—C13ii0.6 (3)C5—C4—N2—C6157.60 (17)
C10—C11—C12—C13ii−179.13 (16)C3—C4—N2—C6−24.7 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2N···O1iii0.89 (2)1.98 (2)2.8616 (18)171.3 (18)
O2—H1N···N1iv1.00 (3)1.69 (3)2.6938 (19)178 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2N⋯O1i0.89 (2)1.98 (2)2.8616 (18)171.3 (18)
O2—H1N⋯N1ii1.00 (3)1.69 (3)2.6938 (19)178 (2)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Terephthalic acid-4,4'-bipyridine (2/1).

Authors:  Suwen Wang; Tianyu Yang; Zhongfang Li; Xianjin Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-22

3.  2-Amino-terephthalic acid-4,4'-bipyridine (1/1).

Authors:  Wenzhi Xiao; Ruiting Xue; Yansheng Yin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07
  3 in total

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