Literature DB >> 22220057

4-[Tris(1H-pyrazol-1-yl)meth-yl]phenol.

Xiao-Yan Chen1, Xiaoping Yang, Bradley J Holliday.   

Abstract

The title compound, C(16)H(14)N(6)O, was prepared by the condensation of 4-(trifluoro-meth-yl)phenol and sodium pyrazol-1-ide in a yield of 58%. The dihedral angles formed by the planes of the pyrazole rings are 50.7 (2), 71.2 (3) and 95.8 (2)°. The mol-ecules are associated into dimers by pairs of inter-molecular O-H⋯N hydrogen bonds involving the hy-droxy groups and pyrazole N atoms. In addition, π-π stacking between the phenol rings of these inversion-related dimers is observed, with a ring centroid-to-centroid distance of 3.9247 (10) Å.

Entities:  

Year:  2011        PMID: 22220057      PMCID: PMC3247439          DOI: 10.1107/S1600536811043042

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation and coordination chemistry of tris(pyrazol­yl)borates and tris­(pyrazol­yl)methanes, see: Trofimenko (1966 ▶, 1970 ▶, 1999 ▶); Pettinari & Pettinari (2005 ▶); Reger et al. (2000 ▶). For the chemistry of tris­(pyrazol­yl)methane derivatives, see: Humphrey et al. (1999 ▶). For similar structures, see: Liddle & Gardinier (2007 ▶).

Experimental

Crystal data

C16H14N6O M = 306.33 Triclinic, a = 8.5065 (17) Å b = 8.6829 (17) Å c = 10.815 (2) Å α = 96.97 (3)° β = 91.51 (2)° γ = 109.40 (3)° V = 746.0 (3) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 153 K 0.30 × 0.28 × 0.20 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: Gaussian (XPREP in SHELXTL; Sheldrick, 2008 ▶) T min = 0.973, T max = 0.983 4225 measured reflections 2609 independent reflections 1975 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.099 S = 1.07 2609 reflections 209 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.27 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: XL in SHELXTL/PC (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and POV-RAY (Persistence of Vision Team, 2004 ▶); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008 ▶) and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811043042/pk2340sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811043042/pk2340Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811043042/pk2340Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H14N6OZ = 2
Mr = 306.33F(000) = 320
Triclinic, P1Dx = 1.364 Mg m3
Hall symbol: -P 1Melting point: 443 K
a = 8.5065 (17) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.6829 (17) ÅCell parameters from 2208 reflections
c = 10.815 (2) Åθ = 2.9–27.5°
α = 96.97 (3)°µ = 0.09 mm1
β = 91.51 (2)°T = 153 K
γ = 109.40 (3)°Block, colourless
V = 746.0 (3) Å30.30 × 0.28 × 0.20 mm
Nonius KappaCCD diffractometer2609 independent reflections
Radiation source: fine-focus sealed tube1975 reflections with I > 2σ(I)
graphiteRint = 0.025
ω scansθmax = 25.0°, θmin = 2.9°
Absorption correction: gaussian (XPREP in SHELXTL; Sheldrick, 2008)h = −10→10
Tmin = 0.973, Tmax = 0.983k = −10→10
4225 measured reflectionsl = −12→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.099H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.038P)2 + 0.1787P] where P = (Fo2 + 2Fc2)/3
2609 reflections(Δ/σ)max < 0.001
209 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.00800 (16)1.32161 (15)0.03852 (13)0.0266 (3)
H1A0.97901.2970−0.03620.054 (8)*
N10.74972 (17)0.78542 (18)0.40566 (13)0.0180 (4)
N20.69159 (19)0.65739 (19)0.47332 (15)0.0244 (4)
N30.98104 (17)0.72693 (18)0.31464 (14)0.0181 (4)
N41.08607 (18)0.73336 (19)0.22092 (15)0.0237 (4)
N50.70790 (17)0.60541 (17)0.21695 (14)0.0173 (4)
N60.54566 (18)0.59411 (18)0.19620 (14)0.0216 (4)
C10.9528 (2)1.1846 (2)0.09625 (17)0.0197 (4)
C20.8251 (2)1.0424 (2)0.04486 (17)0.0213 (4)
H2A0.76951.0394−0.03110.026*
C30.7802 (2)0.9051 (2)0.10623 (16)0.0191 (4)
H3A0.69440.81030.07110.023*
C40.8613 (2)0.9069 (2)0.21937 (16)0.0165 (4)
C50.9873 (2)1.0523 (2)0.27129 (17)0.0206 (4)
H5A1.04271.05600.34750.025*
C61.0305 (2)1.1896 (2)0.21160 (17)0.0213 (4)
H6A1.11211.28630.24870.026*
C70.8240 (2)0.7575 (2)0.28833 (16)0.0173 (4)
C80.6124 (2)0.7133 (2)0.56240 (18)0.0250 (5)
H8A0.55990.65280.62410.030*
C90.6169 (2)0.8729 (2)0.55301 (18)0.0263 (5)
H9A0.57100.93710.60550.032*
C100.7026 (2)0.9154 (2)0.45071 (17)0.0208 (4)
H10A0.72461.01410.41800.025*
C111.2086 (2)0.6894 (2)0.2675 (2)0.0268 (5)
H11A1.29990.68320.22440.032*
C121.1831 (2)0.6538 (2)0.3889 (2)0.0281 (5)
H12A1.25170.62100.44050.034*
C131.0367 (2)0.6771 (2)0.41634 (18)0.0225 (5)
H13A0.98460.66170.49060.027*
C140.4724 (2)0.4422 (2)0.13858 (17)0.0220 (4)
H14A0.35990.39850.11110.026*
C150.5835 (2)0.3552 (2)0.12394 (19)0.0284 (5)
H15A0.56020.24680.08700.034*
C160.7341 (2)0.4636 (2)0.17562 (18)0.0238 (5)
H16A0.83470.44340.18110.029*
U11U22U33U12U13U23
O10.0374 (8)0.0219 (8)0.0236 (9)0.0116 (6)0.0085 (6)0.0092 (6)
N10.0197 (8)0.0170 (8)0.0171 (8)0.0049 (7)0.0029 (7)0.0049 (7)
N20.0284 (9)0.0226 (9)0.0218 (9)0.0056 (7)0.0055 (7)0.0093 (7)
N30.0155 (8)0.0185 (9)0.0209 (9)0.0065 (6)0.0013 (7)0.0034 (7)
N40.0187 (8)0.0256 (9)0.0297 (10)0.0101 (7)0.0072 (7)0.0066 (8)
N50.0149 (8)0.0167 (9)0.0207 (9)0.0063 (6)0.0007 (6)0.0017 (7)
N60.0152 (8)0.0231 (9)0.0255 (9)0.0057 (7)0.0005 (7)0.0023 (7)
C10.0231 (10)0.0180 (11)0.0234 (11)0.0126 (8)0.0098 (8)0.0056 (8)
C20.0241 (10)0.0261 (11)0.0178 (10)0.0133 (9)0.0009 (8)0.0044 (9)
C30.0184 (10)0.0202 (11)0.0183 (10)0.0067 (8)0.0003 (8)0.0001 (8)
C40.0156 (9)0.0167 (10)0.0189 (10)0.0077 (8)0.0041 (8)0.0025 (8)
C50.0181 (10)0.0235 (11)0.0199 (11)0.0070 (8)−0.0014 (8)0.0020 (8)
C60.0210 (10)0.0167 (10)0.0235 (11)0.0032 (8)0.0030 (8)0.0011 (8)
C70.0145 (9)0.0186 (10)0.0188 (10)0.0061 (8)0.0008 (8)0.0017 (8)
C80.0210 (10)0.0329 (12)0.0185 (11)0.0049 (9)0.0037 (8)0.0048 (9)
C90.0228 (11)0.0321 (12)0.0248 (11)0.0120 (9)0.0039 (9)−0.0010 (9)
C100.0206 (10)0.0201 (10)0.0241 (11)0.0106 (8)−0.0002 (8)0.0013 (8)
C110.0181 (10)0.0227 (11)0.0415 (14)0.0090 (9)0.0027 (9)0.0056 (10)
C120.0228 (11)0.0230 (11)0.0400 (14)0.0101 (9)−0.0097 (9)0.0057 (10)
C130.0255 (11)0.0191 (11)0.0223 (11)0.0066 (8)−0.0046 (8)0.0046 (8)
C140.0190 (10)0.0220 (11)0.0199 (11)0.0005 (8)0.0004 (8)0.0023 (8)
C150.0305 (12)0.0193 (11)0.0309 (12)0.0053 (9)0.0004 (9)−0.0042 (9)
C160.0253 (11)0.0198 (11)0.0297 (12)0.0128 (9)0.0023 (9)0.0012 (9)
O1—C11.360 (2)C4—C51.399 (3)
O1—H1A0.8200C4—C71.521 (3)
N1—C101.360 (2)C5—C61.371 (3)
N1—N21.366 (2)C5—H5A0.9300
N1—C71.462 (2)C6—H6A0.9300
N2—C81.325 (2)C8—C91.390 (3)
N3—C131.358 (2)C8—H8A0.9300
N3—N41.363 (2)C9—C101.362 (3)
N3—C71.473 (2)C9—H9A0.9300
N4—C111.330 (2)C10—H10A0.9300
N5—C161.349 (2)C11—C121.391 (3)
N5—N61.361 (2)C11—H11A0.9300
N5—C71.470 (2)C12—C131.361 (3)
N6—C141.323 (2)C12—H12A0.9300
C1—C61.385 (3)C13—H13A0.9300
C1—C21.387 (3)C14—C151.393 (3)
C2—C31.382 (3)C14—H14A0.9300
C2—H2A0.9300C15—C161.369 (3)
C3—C41.385 (2)C15—H15A0.9300
C3—H3A0.9300C16—H16A0.9300
C1—O1—H1A109.5N1—C7—N3109.47 (14)
C10—N1—N2111.56 (15)N5—C7—N3107.01 (14)
C10—N1—C7128.86 (15)N1—C7—C4110.73 (14)
N2—N1—C7118.61 (14)N5—C7—C4113.65 (14)
C8—N2—N1104.13 (15)N3—C7—C4108.88 (14)
C13—N3—N4111.24 (14)N2—C8—C9112.15 (18)
C13—N3—C7130.58 (16)N2—C8—H8A123.9
N4—N3—C7117.89 (14)C9—C8—H8A123.9
C11—N4—N3104.65 (15)C10—C9—C8105.46 (18)
C16—N5—N6112.33 (15)C10—C9—H9A127.3
C16—N5—C7129.11 (15)C8—C9—H9A127.3
N6—N5—C7118.30 (14)N1—C10—C9106.65 (17)
C14—N6—N5103.95 (14)N1—C10—H10A126.7
O1—C1—C6117.37 (17)C9—C10—H10A126.7
O1—C1—C2123.26 (17)N4—C11—C12111.55 (17)
C6—C1—C2119.36 (17)N4—C11—H11A124.2
C3—C2—C1120.19 (17)C12—C11—H11A124.2
C3—C2—H2A119.9C13—C12—C11105.54 (17)
C1—C2—H2A119.9C13—C12—H12A127.2
C2—C3—C4120.83 (17)C11—C12—H12A127.2
C2—C3—H3A119.6N3—C13—C12107.00 (18)
C4—C3—H3A119.6N3—C13—H13A126.5
C3—C4—C5118.31 (17)C12—C13—H13A126.5
C3—C4—C7123.42 (16)N6—C14—C15112.14 (17)
C5—C4—C7118.25 (16)N6—C14—H14A123.9
C6—C5—C4121.01 (17)C15—C14—H14A123.9
C6—C5—H5A119.5C16—C15—C14105.15 (17)
C4—C5—H5A119.5C16—C15—H15A127.4
C5—C6—C1120.22 (17)C14—C15—H15A127.4
C5—C6—H6A119.9N5—C16—C15106.41 (17)
C1—C6—H6A119.9N5—C16—H16A126.8
N1—C7—N5106.98 (14)C15—C16—H16A126.8
D—H···AD—HH···AD···AD—H···A
O1—H1A···N4i0.822.022.836 (2)173.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯N4i0.822.022.836 (2)173

Symmetry code: (i) .

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