Literature DB >> 22219936

2-Methyl-1-phenyl-1H-indole-3-carbo-nitrile.

Kun Yang, Pei-Fan Li, Yan Liu, Zhi-Zhong Fang.   

Abstract

In the title compound, C(16)H(12)N(2), the dihedral angle between the indole ring system and the pendant phenyl ring is 64.92 (5)°. The crystal packing features aromatic π-π stacking [centroid-centroid separation = 3.9504 (9) Å] and C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 22219936      PMCID: PMC3247318          DOI: 10.1107/S1600536811039250

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Du et al. (2006 ▶). For its precursor, see: Jin et al. (2009 ▶). For related structures, see: Yang et al. (2011 ▶); Yan & Qi (2011a ▶,b ▶).

Experimental

Crystal data

C16H12N2 M = 232.28 Triclinic, a = 6.3610 (5) Å b = 9.497 (1) Å c = 11.0210 (12) Å α = 65.97 (2)° β = 80.52 (2)° γ = 88.13 (2)° V = 599.34 (14) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 113 K 0.26 × 0.24 × 0.06 mm

Data collection

Rigaku Saturn724 CCD diffractometer Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2009 ▶) T min = 0.980, T max = 0.995 11425 measured reflections 3494 independent reflections 2309 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.120 S = 0.98 3494 reflections 164 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.29 e Å−3 Data collection: CrystalClear-SM Expert (Rigaku 2009 ▶); cell refinement: CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: CrystalStructure (Rigaku, 2009 ▶); software used to prepare material for publication: CrystalStructure. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811039250/hb6411sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811039250/hb6411Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811039250/hb6411Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12N2Z = 2
Mr = 232.28F(000) = 244
Triclinic, P1Dx = 1.287 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71075 Å
a = 6.3610 (5) ÅCell parameters from 2709 reflections
b = 9.497 (1) Åθ = 2.1–33.5°
c = 11.0210 (12) ŵ = 0.08 mm1
α = 65.97 (2)°T = 113 K
β = 80.52 (2)°Prism, colorless
γ = 88.13 (2)°0.26 × 0.24 × 0.06 mm
V = 599.34 (14) Å3
Rigaku Saturn724 CCD diffractometer3494 independent reflections
Radiation source: rotating anode2309 reflections with I > 2σ(I)
multilayerRint = 0.040
Detector resolution: 14.222 pixels mm-1θmax = 30.0°, θmin = 2.1°
ω scansh = −8→8
Absorption correction: multi-scan (CrystalClear-SM Expert; Rigaku, 2009)k = −13→13
Tmin = 0.980, Tmax = 0.995l = −15→15
11425 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.120H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0674P)2] where P = (Fo2 + 2Fc2)/3
3494 reflections(Δ/σ)max = 0.002
164 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.44315 (14)0.77239 (10)0.77878 (9)0.0185 (2)
N20.81470 (18)0.84332 (13)0.34779 (11)0.0345 (3)
C10.60803 (17)0.82767 (13)0.67167 (11)0.0194 (2)
C20.56979 (18)0.77831 (13)0.57514 (11)0.0209 (2)
C30.37200 (18)0.68851 (13)0.62387 (11)0.0202 (2)
C40.29646 (17)0.68823 (12)0.75088 (11)0.0187 (2)
C50.10695 (18)0.61245 (13)0.82939 (11)0.0216 (2)
H50.05820.61420.91500.026*
C6−0.00823 (18)0.53441 (14)0.77872 (12)0.0249 (3)
H6−0.13910.48200.82990.030*
C70.06551 (19)0.53158 (14)0.65265 (12)0.0275 (3)
H7−0.01580.47630.62020.033*
C80.2539 (2)0.60756 (14)0.57463 (12)0.0257 (3)
H80.30240.60490.48930.031*
C90.78658 (18)0.92844 (14)0.66577 (12)0.0246 (3)
H9A0.92270.88510.64490.030*
H9B0.77770.93480.75300.030*
H9C0.77721.03190.59550.030*
C100.70487 (19)0.81451 (14)0.44957 (12)0.0240 (3)
C110.42676 (17)0.78451 (12)0.90546 (11)0.0192 (2)
C120.57306 (19)0.71355 (14)0.98980 (12)0.0248 (3)
H120.68570.65880.96290.030*
C130.5548 (2)0.72252 (14)1.11344 (12)0.0285 (3)
H130.65780.67731.17010.034*
C140.3862 (2)0.79746 (14)1.15407 (12)0.0293 (3)
H140.37230.80271.23930.035*
C150.2379 (2)0.86476 (15)1.07108 (12)0.0313 (3)
H150.12070.91441.10020.038*
C160.25896 (19)0.86032 (14)0.94531 (12)0.0261 (3)
H160.15890.90900.88730.031*
U11U22U33U12U13U23
N10.0180 (5)0.0208 (5)0.0170 (5)0.0005 (4)−0.0012 (3)−0.0085 (4)
N20.0369 (6)0.0412 (7)0.0228 (5)−0.0072 (5)0.0039 (4)−0.0131 (5)
C10.0185 (5)0.0204 (5)0.0174 (5)0.0010 (4)−0.0014 (4)−0.0064 (4)
C20.0217 (6)0.0224 (5)0.0162 (5)−0.0005 (4)−0.0008 (4)−0.0063 (4)
C30.0207 (6)0.0209 (5)0.0168 (5)0.0004 (4)−0.0029 (4)−0.0054 (4)
C40.0187 (5)0.0191 (5)0.0177 (5)0.0016 (4)−0.0038 (4)−0.0066 (4)
C50.0198 (6)0.0236 (6)0.0190 (5)0.0003 (4)−0.0006 (4)−0.0071 (4)
C60.0198 (6)0.0270 (6)0.0247 (6)−0.0036 (5)−0.0030 (5)−0.0072 (5)
C70.0279 (6)0.0304 (6)0.0253 (6)−0.0051 (5)−0.0080 (5)−0.0108 (5)
C80.0306 (7)0.0289 (6)0.0178 (6)−0.0019 (5)−0.0056 (5)−0.0089 (5)
C90.0235 (6)0.0259 (6)0.0228 (6)−0.0043 (5)0.0005 (4)−0.0096 (5)
C100.0253 (6)0.0261 (6)0.0191 (6)−0.0029 (5)−0.0018 (4)−0.0082 (5)
C110.0211 (5)0.0191 (5)0.0167 (5)−0.0013 (4)−0.0007 (4)−0.0072 (4)
C120.0223 (6)0.0291 (6)0.0244 (6)0.0048 (5)−0.0032 (5)−0.0127 (5)
C130.0323 (7)0.0331 (7)0.0220 (6)0.0037 (5)−0.0097 (5)−0.0116 (5)
C140.0408 (8)0.0278 (6)0.0209 (6)0.0001 (5)−0.0030 (5)−0.0121 (5)
C150.0363 (7)0.0327 (7)0.0267 (7)0.0101 (6)−0.0012 (5)−0.0162 (5)
C160.0274 (6)0.0287 (6)0.0240 (6)0.0086 (5)−0.0059 (5)−0.0123 (5)
N1—C11.3757 (14)C7—H70.9500
N1—C41.3955 (14)C8—H80.9500
N1—C111.4337 (13)C9—H9A0.9800
N2—C101.1514 (15)C9—H9B0.9800
C1—C21.3819 (16)C9—H9C0.9800
C1—C91.4853 (16)C11—C161.3797 (16)
C2—C101.4183 (16)C11—C121.3849 (16)
C2—C31.4398 (17)C12—C131.3854 (16)
C3—C81.4006 (16)C12—H120.9500
C3—C41.4020 (15)C13—C141.3815 (17)
C4—C51.3877 (16)C13—H130.9500
C5—C61.3804 (16)C14—C151.3797 (17)
C5—H50.9500C14—H140.9500
C6—C71.4021 (17)C15—C161.3881 (16)
C6—H60.9500C15—H150.9500
C7—C81.3813 (17)C16—H160.9500
C1—N1—C4109.22 (9)C3—C8—H8120.7
C1—N1—C11127.12 (9)C1—C9—H9A109.5
C4—N1—C11123.45 (9)C1—C9—H9B109.5
N1—C1—C2108.27 (10)H9A—C9—H9B109.5
N1—C1—C9123.13 (10)C1—C9—H9C109.5
C2—C1—C9128.56 (10)H9A—C9—H9C109.5
C1—C2—C10124.37 (11)H9B—C9—H9C109.5
C1—C2—C3108.35 (10)N2—C10—C2179.74 (14)
C10—C2—C3127.28 (11)C16—C11—C12120.47 (10)
C8—C3—C4119.01 (11)C16—C11—N1119.62 (10)
C8—C3—C2135.08 (11)C12—C11—N1119.82 (10)
C4—C3—C2105.90 (10)C11—C12—C13119.86 (11)
C5—C4—N1129.20 (10)C11—C12—H12120.1
C5—C4—C3122.53 (10)C13—C12—H12120.1
N1—C4—C3108.27 (10)C14—C13—C12119.80 (11)
C6—C5—C4117.64 (11)C14—C13—H13120.1
C6—C5—H5121.2C12—C13—H13120.1
C4—C5—H5121.2C15—C14—C13120.11 (11)
C5—C6—C7120.81 (11)C15—C14—H14119.9
C5—C6—H6119.6C13—C14—H14119.9
C7—C6—H6119.6C14—C15—C16120.38 (11)
C8—C7—C6121.36 (11)C14—C15—H15119.8
C8—C7—H7119.3C16—C15—H15119.8
C6—C7—H7119.3C11—C16—C15119.33 (11)
C7—C8—C3118.63 (11)C11—C16—H16120.3
C7—C8—H8120.7C15—C16—H16120.3
C4—N1—C1—C2−0.61 (12)C3—C4—C5—C60.38 (17)
C11—N1—C1—C2174.22 (9)C4—C5—C6—C70.39 (17)
C4—N1—C1—C9177.02 (10)C5—C6—C7—C8−0.60 (18)
C11—N1—C1—C9−8.15 (16)C6—C7—C8—C30.03 (18)
N1—C1—C2—C10179.25 (10)C4—C3—C8—C70.71 (17)
C9—C1—C2—C101.79 (19)C2—C3—C8—C7179.55 (12)
N1—C1—C2—C30.15 (12)C1—C2—C10—N2113 (37)
C9—C1—C2—C3−177.31 (11)C3—C2—C10—N2−68 (37)
C1—C2—C3—C8−178.58 (13)C1—N1—C11—C16119.92 (13)
C10—C2—C3—C82.4 (2)C4—N1—C11—C16−65.94 (14)
C1—C2—C3—C40.36 (12)C1—N1—C11—C12−63.31 (15)
C10—C2—C3—C4−178.71 (11)C4—N1—C11—C12110.84 (13)
C1—N1—C4—C5−179.85 (11)C16—C11—C12—C13−1.93 (18)
C11—N1—C4—C55.09 (17)N1—C11—C12—C13−178.67 (10)
C1—N1—C4—C30.85 (12)C11—C12—C13—C142.34 (19)
C11—N1—C4—C3−174.22 (9)C12—C13—C14—C15−0.77 (19)
C8—C3—C4—C5−0.94 (16)C13—C14—C15—C16−1.2 (2)
C2—C3—C4—C5179.91 (10)C12—C11—C16—C15−0.06 (18)
C8—C3—C4—N1178.42 (10)N1—C11—C16—C15176.69 (10)
C2—C3—C4—N1−0.73 (12)C14—C15—C16—C111.64 (19)
N1—C4—C5—C6−178.84 (10)
Cg2 and Cg3 are the centroids of the C3–C8 and C11–C16 rings, respectively.
D—H···AD—HH···AD···AD—H···A
C6—H6···Cg3i0.952.853.719 (1)152
C9—H9A···Cg2ii0.982.943.799 (2)147
C13—H13···Cg2iii0.952.773.537 (2)139
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 and Cg3 are the centroids of the C3–C8 and C11–C16 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯Cg3i0.952.853.719 (1)152
C9—H9ACg2ii0.982.943.799 (2)147
C13—H13⋯Cg2iii0.952.773.537 (2)139

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis of N-substituted indole derivatives via PIFA-mediated intramolecular cyclization.

Authors:  Yunfei Du; Renhe Liu; Gregory Linn; Kang Zhao
Journal:  Org Lett       Date:  2006-12-21       Impact factor: 6.005

3.  (Z)-Ethyl 2,4-diphenyl-3-(propyl-amino)-but-2-enoate.

Authors:  Huimin Jin; Peifan Li; Bin Liu; Xiaoqing Cheng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-08

4.  1-(2-Chloro-phenyl)-6-fluoro-2-methyl-1H-indole-3-carbonitrile.

Authors:  Kun Yang; Pei-Fan Li; Yan Liu; Zhi-Zhong Fang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07

5.  1-(4-Meth-oxy-phen-yl)-2-methyl-1H-indole-3-carbonitrile.

Authors:  Qiao Yan; Xiuxiang Qi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-11

6.  1-(4-Bromo-phen-yl)-2-methyl-1H-indole-3-carbonitrile.

Authors:  Qiao Yan; Xiuxiang Qi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.