Literature DB >> 22219930

6-Benzyl-6,7-dihydro-5H-pyrrolo-[3,4-b]pyridine-5,7-dione.

Hong-Shun Sun, Long Jiang, Hong Xu, Xin-Hua Lu, Yu-Long Li.   

Abstract

In the title compound, C(14)H(10)N(2)O(2), the dihedral angle between the heterocyclic ring system and the phenyl ring is 45.8 (5)°. Weak inter-molecular C-H⋯N hydrogen bonding is present in the crystal structure.

Entities:  

Year:  2011        PMID: 22219930      PMCID: PMC3247312          DOI: 10.1107/S1600536811041006

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is a key inter­mediate in the synthesis of the quinolone anti­biotic moxifloxacin [systematic name: 1-cyclo­propyl-7-[(1S,6S)-2,8-diaza­bicyclo­[4.3.0]non-8-yl]-6-fluoro-8-meth­oxy-4-oxo-quinoline-3-carb­oxy­lic acid], see: Petersen et al. (1993 ▶). For a related structure, see: Garduño-Beltrán et al. (2009 ▶).

Experimental

Crystal data

C14H10N2O2 M = 238.24 Monoclinic, a = 11.8548 (6) Å b = 12.3969 (8) Å c = 8.1676 (4) Å β = 107.45 (3)° V = 1145.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.981, T max = 0.991 2087 measured reflections 2087 independent reflections 1100 reflections with I > 2σ(I) R int = 0.045 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.174 S = 1.00 2087 reflections 163 parameters 12 restraints H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.13 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811041006/xu5342sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811041006/xu5342Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811041006/xu5342Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10N2O2F(000) = 496
Mr = 238.24Dx = 1.382 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 11.8548 (6) Åθ = 10–13°
b = 12.3969 (8) ŵ = 0.10 mm1
c = 8.1676 (4) ÅT = 293 K
β = 107.45 (3)°Block, colorless
V = 1145.1 (2) Å30.20 × 0.10 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1100 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.045
graphiteθmax = 25.4°, θmin = 1.8°
ω/2θ scansh = −14→13
Absorption correction: ψ scan (North et al., 1968)k = 0→14
Tmin = 0.981, Tmax = 0.991l = 0→9
2087 measured reflections3 standard reflections every 200 reflections
2087 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.174H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.082P)2] where P = (Fo2 + 2Fc2)/3
2087 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.17 e Å3
12 restraintsΔρmin = −0.13 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.2267 (2)0.6223 (2)0.0923 (3)0.0602 (7)
O10.20765 (18)0.43903 (17)0.1329 (3)0.0753 (7)
C10.4977 (3)0.7166 (3)0.2368 (5)0.0896 (11)
H1A0.46400.78100.18710.108*
N2−0.0141 (2)0.74370 (19)0.2194 (3)0.0711 (7)
O20.19962 (18)0.80705 (17)0.0885 (3)0.0782 (7)
C20.6005 (3)0.7199 (3)0.3733 (5)0.0957 (12)
H2B0.63270.78610.41700.115*
C30.6539 (3)0.6287 (3)0.4429 (4)0.0763 (9)
H3A0.72420.63070.53240.092*
C40.6038 (3)0.5337 (3)0.3807 (5)0.0980 (13)
H4A0.63980.46980.42890.118*
C50.5005 (3)0.5297 (3)0.2473 (5)0.0919 (12)
H5A0.46810.46300.20660.110*
C60.4446 (2)0.6219 (2)0.1734 (3)0.0577 (8)
C70.3308 (3)0.6186 (3)0.0307 (4)0.0758 (10)
H7A0.32820.6793−0.04540.091*
H7B0.32820.5530−0.03510.091*
C80.1751 (2)0.5306 (2)0.1379 (3)0.0570 (8)
C90.0735 (2)0.5705 (2)0.1955 (3)0.0505 (6)
C10−0.0010 (2)0.5161 (2)0.2533 (3)0.0493 (7)
H10A0.00400.44150.26530.059*
C11−0.0833 (3)0.5716 (2)0.2939 (4)0.0655 (8)
H11A−0.13720.53420.33530.079*
C12−0.0940 (3)0.6819 (2)0.2785 (3)0.0633 (8)
H12A−0.15500.71640.30750.076*
C130.0710 (2)0.6813 (2)0.1768 (3)0.0504 (6)
C140.1696 (3)0.7163 (2)0.1142 (3)0.0581 (8)
U11U22U33U12U13U23
N10.0490 (14)0.0711 (16)0.0568 (14)0.0019 (13)0.0100 (11)0.0026 (13)
O10.0755 (15)0.0661 (14)0.0803 (15)0.0207 (12)0.0173 (12)−0.0042 (11)
C10.063 (2)0.075 (2)0.118 (3)−0.0018 (18)0.007 (2)0.021 (2)
N20.0711 (18)0.0628 (14)0.0755 (17)0.0089 (11)0.0162 (13)−0.0014 (12)
O20.0702 (15)0.0627 (13)0.0928 (16)−0.0110 (11)0.0108 (12)0.0161 (11)
C20.067 (2)0.084 (3)0.120 (3)−0.014 (2)0.003 (2)−0.005 (2)
C30.0509 (18)0.101 (3)0.076 (2)−0.001 (2)0.0185 (16)0.001 (2)
C40.068 (2)0.079 (3)0.129 (3)0.009 (2)0.003 (2)0.014 (2)
C50.073 (3)0.072 (2)0.113 (3)−0.0044 (19)0.000 (2)−0.010 (2)
C60.0490 (16)0.071 (2)0.0572 (16)0.0014 (16)0.0227 (14)0.0005 (16)
C70.0562 (19)0.114 (3)0.0586 (18)−0.0033 (18)0.0195 (16)0.0010 (18)
C80.0532 (18)0.0573 (19)0.0503 (17)0.0024 (15)−0.0002 (13)−0.0016 (13)
C90.0483 (15)0.0511 (12)0.0446 (15)0.0002 (12)0.0027 (12)−0.0005 (12)
C100.0542 (17)0.0359 (12)0.0503 (15)0.0001 (10)0.0040 (12)0.0023 (11)
C110.0599 (18)0.0689 (14)0.0665 (19)0.0027 (14)0.0171 (15)0.0000 (16)
C120.0601 (19)0.0673 (15)0.0618 (18)0.0126 (14)0.0171 (14)−0.0092 (16)
C130.0525 (15)0.0481 (12)0.0442 (14)−0.0032 (12)0.0049 (12)0.0002 (12)
C140.0516 (18)0.060 (2)0.0516 (17)−0.0023 (15)−0.0014 (13)0.0026 (14)
N1—C141.385 (4)C4—H4A0.9300
N1—C81.394 (3)C5—C61.367 (4)
N1—C71.467 (4)C5—H5A0.9300
O1—C81.203 (3)C6—C71.496 (4)
C1—C61.359 (4)C7—H7A0.9700
C1—C21.384 (5)C7—H7B0.9700
C1—H1A0.9300C8—C91.503 (4)
N2—C131.395 (3)C9—C101.306 (3)
N2—C121.411 (4)C9—C131.382 (4)
O2—C141.217 (3)C10—C111.315 (4)
C2—C31.336 (4)C10—H10A0.9300
C2—H2B0.9300C11—C121.376 (4)
C3—C41.347 (4)C11—H11A0.9300
C3—H3A0.9300C12—H12A0.9300
C4—C51.374 (4)C13—C141.474 (4)
C14—N1—C8112.4 (2)N1—C7—H7B109.0
C14—N1—C7124.4 (3)C6—C7—H7B109.0
C8—N1—C7123.2 (3)H7A—C7—H7B107.8
C6—C1—C2121.9 (3)O1—C8—N1126.2 (3)
C6—C1—H1A119.1O1—C8—C9128.0 (3)
C2—C1—H1A119.1N1—C8—C9105.8 (2)
C13—N2—C12113.2 (2)C10—C9—C13124.0 (3)
C3—C2—C1120.5 (3)C10—C9—C8129.5 (3)
C3—C2—H2B119.7C13—C9—C8106.5 (3)
C1—C2—H2B119.7C9—C10—C11117.1 (3)
C2—C3—C4118.7 (3)C9—C10—H10A121.5
C2—C3—H3A120.7C11—C10—H10A121.5
C4—C3—H3A120.7C10—C11—C12123.4 (3)
C3—C4—C5121.2 (3)C10—C11—H11A118.3
C3—C4—H4A119.4C12—C11—H11A118.3
C5—C4—H4A119.4C11—C12—N2121.3 (3)
C6—C5—C4121.2 (3)C11—C12—H12A119.4
C6—C5—H5A119.4N2—C12—H12A119.4
C4—C5—H5A119.4C9—C13—N2121.1 (3)
C1—C6—C5116.5 (3)C9—C13—C14109.8 (3)
C1—C6—C7121.8 (3)N2—C13—C14129.1 (2)
C5—C6—C7121.7 (3)O2—C14—N1125.2 (3)
N1—C7—C6112.7 (2)O2—C14—C13129.4 (3)
N1—C7—H7A109.0N1—C14—C13105.4 (2)
C6—C7—H7A109.0
C6—C1—C2—C32.8 (6)C13—C9—C10—C110.7 (4)
C1—C2—C3—C4−1.9 (6)C8—C9—C10—C11−179.4 (2)
C2—C3—C4—C50.6 (6)C9—C10—C11—C12−0.1 (4)
C3—C4—C5—C6−0.3 (6)C10—C11—C12—N2−1.1 (4)
C2—C1—C6—C5−2.4 (5)C13—N2—C12—C111.4 (4)
C2—C1—C6—C7177.4 (3)C10—C9—C13—N2−0.2 (4)
C4—C5—C6—C11.1 (5)C8—C9—C13—N2179.9 (2)
C4—C5—C6—C7−178.7 (3)C10—C9—C13—C14178.1 (2)
C14—N1—C7—C691.4 (3)C8—C9—C13—C14−1.8 (3)
C8—N1—C7—C6−87.6 (3)C12—N2—C13—C9−0.8 (4)
C1—C6—C7—N1−88.5 (4)C12—N2—C13—C14−178.8 (2)
C5—C6—C7—N191.3 (4)C8—N1—C14—O2177.7 (3)
C14—N1—C8—O1−179.2 (3)C7—N1—C14—O2−1.4 (4)
C7—N1—C8—O1−0.1 (4)C8—N1—C14—C13−1.1 (3)
C14—N1—C8—C90.0 (3)C7—N1—C14—C13179.8 (2)
C7—N1—C8—C9179.2 (2)C9—C13—C14—O2−176.9 (3)
O1—C8—C9—C100.5 (5)N2—C13—C14—O21.2 (5)
N1—C8—C9—C10−178.7 (3)C9—C13—C14—N11.8 (3)
O1—C8—C9—C13−179.6 (3)N2—C13—C14—N1179.9 (2)
N1—C8—C9—C131.1 (3)
D—H···AD—HH···AD···AD—H···A
C10—H10A···N2i0.932.463.386 (3)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C10—H10A⋯N2i0.932.463.386 (3)177

Symmetry code: (i) .

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