Literature DB >> 22219826

fac-Tris(pyridine-2-carboxyl-ato-κN,O)cobalt(III).

Irina A Golenia, Alexander N Boyko, Natalia V Kotova, Matti Haukka, Valentina A Kalibabchuk.   

Abstract

In the title compound, [Co(C(6)H(4)NO(2))(3)], the Co(III) ion lies on a threefold rotation axis and is in a distorted octa-hedral environment defined by three N and three O donor atoms from three fac-disposed pyridine-2-carboxyl-ate ligands. The ligands are coordinated in a chelate fashion, forming three five-membered rings. In the crystal, translationally related complex molecules are organized into columns along [001] via C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22219826      PMCID: PMC3247521          DOI: 10.1107/S1600536811043303

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of hydroxamate ligands in the synthesis of polynuclear compounds, see: Dobosz et al. (1999 ▶); Fritsky et al. (1998 ▶); Sachse et al. (2008 ▶). For hydrolytic destruction of hydroxamate ligands upon complex formation, see: Świątek-Kozłowska et al. (2000 ▶). For related structures, see: Fritsky et al. (2001 ▶); Fu & Wang (2005 ▶); Kovbasyuk et al. (2004 ▶); Krämer & Fritsky (2000 ▶); Mokhir et al. (2002 ▶); Moroz et al. (2010 ▶); Pelizzi & Pelizzi (1981 ▶); Sliva et al. (1997 ▶); Wörl, Fritsky et al. (2005 ▶); Wörl, Pritzkow et al. (2005 ▶). For the synthesis of pyridine-2-hydroxamic acid, see: Hynes (1970 ▶).

Experimental

Crystal data

[Co(C6H4NO2)3] M = 425.24 Hexagonal, a = 12.8617 (12) Å c = 6.2122 (9) Å V = 890.0 (2) Å3 Z = 2 Mo Kα radiation μ = 1.01 mm−1 T = 120 K 0.23 × 0.08 × 0.03 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (DENZO/SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.800, T max = 0.970 5635 measured reflections 978 independent reflections 893 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.197 S = 1.16 978 reflections 86 parameters 1 restraint H-atom parameters constrained Δρmax = 1.05 e Å−3 Δρmin = −0.59 e Å−3 Absolute structure: Flack (1983 ▶), 400 Friedel pairs Flack parameter: −0.02 (7) Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR2004 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811043303/hy2479sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811043303/hy2479Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C6H4NO2)3]Dx = 1.587 Mg m3
Mr = 425.24Mo Kα radiation, λ = 0.71073 Å
Hexagonal, P6Cell parameters from 713 reflections
Hall symbol: P 6θ = 3.2–24.5°
a = 12.8617 (12) ŵ = 1.01 mm1
c = 6.2122 (9) ÅT = 120 K
V = 890.0 (2) Å3Block, pink
Z = 20.23 × 0.08 × 0.03 mm
F(000) = 432
Nonius KappaCCD diffractometer978 independent reflections
Radiation source: fine-focus sealed tube893 reflections with I > 2σ(I)
horizontally mounted graphite crystalRint = 0.043
Detector resolution: 9 pixels mm-1θmax = 25.0°, θmin = 3.2°
φ and ω scans with κ offseth = −15→15
Absorption correction: multi-scan (DENZO/SCALEPACK; Otwinowski & Minor, 1997)k = −15→15
Tmin = 0.800, Tmax = 0.970l = −7→7
5635 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.068H-atom parameters constrained
wR(F2) = 0.197w = 1/[σ2(Fo2) + (0.1316P)2 + 0.9442P] where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max < 0.001
978 reflectionsΔρmax = 1.05 e Å3
86 parametersΔρmin = −0.59 e Å3
1 restraintAbsolute structure: Flack (1983), 400 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.02 (7)
Experimental. The final structural refinement was performed by using the twin law -1 -1 0 0 1 0 0 0 -1 with the final BASF parameter refining to 0.80178.
xyzUiso*/Ueq
Co10.33330.66670.3408 (2)0.0379 (5)
O10.4550 (7)0.7860 (7)0.5147 (11)0.0514 (18)
O20.6490 (9)0.8907 (8)0.5627 (16)0.083 (3)
N10.4619 (6)0.6785 (6)0.1705 (12)0.0332 (15)
C10.4622 (10)0.6303 (9)−0.0009 (17)0.051 (2)
H10.38750.5756−0.06560.061*
C20.5687 (9)0.6533 (9)−0.1037 (17)0.050 (2)
H20.56590.6145−0.23550.061*
C30.6747 (10)0.7308 (9)−0.0138 (18)0.052 (2)
H30.74830.7480−0.07950.062*
C40.6729 (9)0.7796 (9)0.159 (2)0.052 (3)
H40.74690.83580.22410.062*
C50.5690 (8)0.7548 (9)0.2577 (18)0.048 (2)
C60.5660 (11)0.8159 (9)0.4512 (18)0.057 (3)
U11U22U33U12U13U23
Co10.0513 (7)0.0513 (7)0.0111 (8)0.0256 (3)0.0000.000
O10.067 (4)0.066 (4)0.018 (4)0.031 (4)−0.007 (3)−0.008 (3)
O20.105 (7)0.067 (5)0.054 (6)0.027 (4)−0.036 (5)0.004 (4)
N10.045 (4)0.047 (4)0.014 (3)0.028 (3)−0.001 (3)0.007 (3)
C10.065 (5)0.056 (5)0.034 (5)0.031 (4)0.006 (4)0.008 (4)
C20.061 (5)0.058 (5)0.041 (6)0.036 (5)0.010 (4)0.006 (4)
C30.060 (6)0.059 (6)0.046 (6)0.038 (5)0.014 (5)0.016 (5)
C40.042 (5)0.067 (6)0.055 (7)0.033 (4)0.012 (5)0.023 (6)
C50.048 (5)0.057 (5)0.042 (6)0.029 (4)−0.005 (4)0.021 (5)
C60.071 (7)0.052 (6)0.036 (6)0.021 (5)−0.027 (6)0.010 (5)
Co1—O1i1.889 (7)C1—C21.402 (14)
Co1—O11.889 (7)C1—H10.9500
Co1—O1ii1.889 (7)C2—C31.344 (16)
Co1—N1i1.904 (7)C2—H20.9500
Co1—N1ii1.904 (7)C3—C41.251 (15)
Co1—N11.904 (7)C3—H30.9500
O1—C61.339 (15)C4—C51.354 (14)
O2—C61.232 (14)C4—H40.9500
N1—C11.233 (14)C5—C61.447 (15)
N1—C51.343 (12)
O1i—Co1—O190.6 (3)N1—C1—C2122.4 (10)
O1i—Co1—O1ii90.6 (3)N1—C1—H1118.8
O1—Co1—O1ii90.6 (3)C2—C1—H1118.8
O1i—Co1—N1i85.4 (3)C3—C2—C1119.3 (10)
O1—Co1—N1i92.1 (2)C3—C2—H2120.4
O1ii—Co1—N1i175.1 (3)C1—C2—H2120.4
O1i—Co1—N1ii92.1 (2)C4—C3—C2117.6 (10)
O1—Co1—N1ii175.1 (3)C4—C3—H3121.2
O1ii—Co1—N1ii85.4 (3)C2—C3—H3121.2
N1i—Co1—N1ii92.1 (3)C3—C4—C5122.2 (11)
O1i—Co1—N1175.1 (3)C3—C4—H4118.9
O1—Co1—N185.4 (3)C5—C4—H4118.9
O1ii—Co1—N192.1 (2)N1—C5—C4121.4 (11)
N1i—Co1—N192.1 (3)N1—C5—C6115.8 (10)
N1ii—Co1—N192.1 (3)C4—C5—C6122.5 (11)
C6—O1—Co1113.3 (7)O2—C6—O1116.2 (13)
C1—N1—C5117.1 (9)O2—C6—C5130.0 (13)
C1—N1—Co1131.3 (7)O1—C6—C5113.8 (10)
C5—N1—Co1111.5 (7)
O1i—Co1—O1—C6179.0 (6)C1—C2—C3—C4−0.2 (14)
O1ii—Co1—O1—C688.4 (8)C2—C3—C4—C51.2 (15)
N1—Co1—O1—C6−3.7 (7)C1—N1—C5—C41.3 (13)
O1—Co1—N1—C1−175.4 (8)Co1—N1—C5—C4−177.9 (7)
O1ii—Co1—N1—C194.2 (9)C1—N1—C5—C6176.1 (7)
N1i—Co1—N1—C1−83.4 (7)Co1—N1—C5—C6−3.1 (8)
N1ii—Co1—N1—C18.8 (8)C3—C4—C5—N1−1.8 (14)
O1—Co1—N1—C53.7 (6)C3—C4—C5—C6−176.3 (8)
O1ii—Co1—N1—C5−86.7 (6)Co1—O1—C6—O2−177.8 (7)
N1i—Co1—N1—C595.7 (7)Co1—O1—C6—C52.9 (9)
N1ii—Co1—N1—C5−172.1 (6)N1—C5—C6—O2−179.0 (10)
C5—N1—C1—C2−0.3 (13)C4—C5—C6—O2−4.2 (13)
Co1—N1—C1—C2178.7 (6)N1—C5—C6—O10.2 (9)
N1—C1—C2—C3−0.2 (14)C4—C5—C6—O1174.9 (9)
D—H···AD—HH···AD···AD—H···A
C3—H3···O2iii0.952.603.212 (14)123
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O2i0.952.603.212 (14)123

Symmetry code: (i) .

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