Literature DB >> 22217704

Convenient and rapid removal of detergent from glycolipids in detergent-resistant membrane microdomains.

Yusuke Suzuki1, Kazuya Kabayama2.   

Abstract

Although detergents are often essential in protocols, they are usually incompatible with further biochemical analysis. There are several methods for detergent removal, but the procedures are complicated or suffer from sample loss. Here, we describe a convenient and rapid method for detergent removal from sialic acid-containing glycosphingolipids (gangliosides) and neutral glycolipids in detergent-resistant membrane (DRM) microdomain. It is based on selective detergent extraction, in which the sample is dried on a glass tube, followed by washing with organic solvent. We investigated 18 organic solvents and used high performance thin-layer chromatography (HPTLC) and matrix-assisted laser desorption/ionization quadrupole ion trap time-of-flight mass spectrometry (MALDI-QIT-TOF MS) to confirm that dichloroethane (DCE) was the most suitable solvent and completely removed the nonionic detergent Triton X-100. Furthermore, DCE extraction effectively removed interference caused by other nonionic, zwitterionic, or ionic detergents in MALDI-QIT-TOF MS analysis.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22217704      PMCID: PMC3276484          DOI: 10.1194/jlr.D020545

Source DB:  PubMed          Journal:  J Lipid Res        ISSN: 0022-2275            Impact factor:   5.922


  22 in total

1.  Effective removal of nonionic detergents in protein mass spectrometry, hydrogen/deuterium exchange, and proteomics.

Authors:  Martial Rey; Hynek Mrázek; Petr Pompach; Petr Novák; Ludovic Pelosi; Gérard Brandolin; Eric Forest; Vladimír Havlícek; Petr Man
Journal:  Anal Chem       Date:  2010-06-15       Impact factor: 6.986

2.  Membrane molecules mobile even after chemical fixation.

Authors:  Kenji A K Tanaka; Kenichi G N Suzuki; Yuki M Shirai; Shusaku T Shibutani; Manami S H Miyahara; Hisae Tsuboi; Miyako Yahara; Akihiko Yoshimura; Satyajit Mayor; Takahiro K Fujiwara; Akihiro Kusumi
Journal:  Nat Methods       Date:  2010-10-03       Impact factor: 28.547

3.  Acquisition of increased hormone sensitivity during in vitro adipocyte development.

Authors:  C S Rubin; E Lai; O M Rosen
Journal:  J Biol Chem       Date:  1977-05-25       Impact factor: 5.157

4.  Triton X-100-resistant membrane complexes from cultured kidney epithelial cells contain the Src family protein tyrosine kinase p62yes.

Authors:  G Arreaza; K A Melkonian; M LaFevre-Bernt; D A Brown
Journal:  J Biol Chem       Date:  1994-07-22       Impact factor: 5.157

5.  Mechanism of signal suppression by anionic surfactants in capillary electrophoresis-electrospray ionization mass spectrometry.

Authors:  K L Rundlett; D W Armstrong
Journal:  Anal Chem       Date:  1996-10-01       Impact factor: 6.986

6.  The effect of detergents on proteins analyzed by electrospray ionization.

Authors:  R R Loo; N Dales; P C Andrews
Journal:  Methods Mol Biol       Date:  1996

Review 7.  Cancer-associated glycosphingolipid antigens: their structure, organization, and function.

Authors:  S Hakomori
Journal:  Acta Anat (Basel)       Date:  1998

Review 8.  Significance of glycosphingolipid fatty acid chain length on membrane microdomain-mediated signal transduction.

Authors:  Kazuhisa Iwabuchi; Hitoshi Nakayama; Chihiro Iwahara; Kenji Takamori
Journal:  FEBS Lett       Date:  2009-10-21       Impact factor: 4.124

9.  Dissociation of the insulin receptor and caveolin-1 complex by ganglioside GM3 in the state of insulin resistance.

Authors:  Kazuya Kabayama; Takashige Sato; Kumiko Saito; Nicoletta Loberto; Alessandro Prinetti; Sandro Sonnino; Masataka Kinjo; Yasuyuki Igarashi; Jin-ichi Inokuchi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-15       Impact factor: 11.205

10.  Removal of detergents from protein digests for mass spectrometry analysis.

Authors:  Yee-Guide Yeung; Edward Nieves; Ruth Hogue Angeletti; E Richard Stanley
Journal:  Anal Biochem       Date:  2008-08-03       Impact factor: 3.365

View more
  2 in total

1.  Structural Characterization of Neutral Glycosphingolipids from 3T3-L1 Adipocytes.

Authors:  Hisao Kojima; Yusuke Suzuki; Masahiro Ito; Kazuya Kabayama
Journal:  Lipids       Date:  2015-05-28       Impact factor: 1.880

2.  A new assay for determining ganglioside sialyltransferase activities lactosylceramide-2,3-sialyltransferase (SAT I) and monosialylganglioside-2,3-sialyltransferase (SAT IV).

Authors:  Cynthia Q Sun; Ulrike Hubl; Petra Hoefakker; Madhusudan K Vasudevamurthy; Keryn D Johnson
Journal:  PLoS One       Date:  2014-04-09       Impact factor: 3.240

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.