Literature DB >> 22210906

Functional analysis of the Arabidopsis PLDZ2 promoter reveals an evolutionarily conserved low-Pi-responsive transcriptional enhancer element.

Araceli Oropeza-Aburto1, Alfredo Cruz-Ramírez, Gustavo J Acevedo-Hernández, Claudia-Anahí Pérez-Torres, Juan Caballero-Pérez, Luis Herrera-Estrella.   

Abstract

Plants have evolved a plethora of responses to cope with phosphate (Pi) deficiency, including the transcriptional activation of a large set of genes. Among Pi-responsive genes, the expression of the Arabidopsis phospholipase DZ2 (PLDZ2) is activated to participate in the degradation of phospholipids in roots in order to release Pi to support other cellular activities. A deletion analysis was performed to identify the regions determining the strength, tissue-specific expression, and Pi responsiveness of this regulatory region. This study also reports the identification and characterization of a transcriptional enhancer element that is present in the PLDZ2 promoter and able to confer Pi responsiveness to a minimal, inactive 35S promoter. This enhancer also shares the cytokinin and sucrose responsive properties observed for the intact PLDZ2 promoter. The EZ2 element contains two P1BS motifs, each of which is the DNA binding site of transcription factor PHR1. Mutation analysis showed that the P1BS motifs present in EZ2 are necessary but not sufficient for the enhancer function, revealing the importance of adjacent sequences. The structural organization of EZ2 is conserved in the orthologous genes of at least eight families of rosids, suggesting that architectural features such as the distance between the two P1BS motifs are also important for the regulatory properties of this enhancer element.

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Year:  2011        PMID: 22210906      PMCID: PMC3295404          DOI: 10.1093/jxb/err446

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  39 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  A novel phosphatidylcholine-hydrolyzing phospholipase C induced by phosphate starvation in Arabidopsis.

Authors:  Yuki Nakamura; Koichiro Awai; Tatsuru Masuda; Yasushi Yoshioka; Ken-ichiro Takamiya; Hiroyuki Ohta
Journal:  J Biol Chem       Date:  2004-12-23       Impact factor: 5.157

Review 3.  Galactolipids rule in seed plants.

Authors:  Peter Dörmann; Christoph Benning
Journal:  Trends Plant Sci       Date:  2002-03       Impact factor: 18.313

4.  Isolation and characterization of root-specific phosphate transporter promoters from Medicago trunatula.

Authors:  K Xiao; J Liu; G Dewbre; M Harrison; Z-Y Wang
Journal:  Plant Biol (Stuttg)       Date:  2006-07       Impact factor: 3.081

5.  DGD2, an arabidopsis gene encoding a UDP-galactose-dependent digalactosyldiacylglycerol synthase is expressed during growth under phosphate-limiting conditions.

Authors:  Amélie A Kelly; Peter Dörmann
Journal:  J Biol Chem       Date:  2001-11-05       Impact factor: 5.157

6.  Phosphate starvation responses are mediated by sugar signaling in Arabidopsis.

Authors:  Athikkattuvalasu S Karthikeyan; Deepa K Varadarajan; Ajay Jain; Michael A Held; Nicholas C Carpita; Kashchandra G Raghothama
Journal:  Planta       Date:  2007-03       Impact factor: 4.116

7.  A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae.

Authors:  V Rubio; F Linhares; R Solano; A C Martín; J Iglesias; A Leyva; J Paz-Ares
Journal:  Genes Dev       Date:  2001-08-15       Impact factor: 11.361

8.  Phospholipase DZ2 plays an important role in extraplastidic galactolipid biosynthesis and phosphate recycling in Arabidopsis roots.

Authors:  Alfredo Cruz-Ramírez; Araceli Oropeza-Aburto; Francisco Razo-Hernández; Enrique Ramírez-Chávez; Luis Herrera-Estrella
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-14       Impact factor: 11.205

9.  A central regulatory system largely controls transcriptional activation and repression responses to phosphate starvation in Arabidopsis.

Authors:  Regla Bustos; Gabriel Castrillo; Francisco Linhares; María Isabel Puga; Vicente Rubio; Julian Pérez-Pérez; Roberto Solano; Antonio Leyva; Javier Paz-Ares
Journal:  PLoS Genet       Date:  2010-09-09       Impact factor: 5.917

10.  Increased expression of the MYB-related transcription factor, PHR1, leads to enhanced phosphate uptake in Arabidopsis thaliana.

Authors:  Lena Nilsson; Renate Müller; Tom Hamborg Nielsen
Journal:  Plant Cell Environ       Date:  2007-10-09       Impact factor: 7.228

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  14 in total

1.  A specific variant of the PHR1 binding site is highly enriched in the Arabidopsis phosphate-responsive phospholipase DZ2 coexpression network.

Authors:  Gustavo Acevedo-Hernández; Araceli Oropeza-Aburto; Luis Herrera-Estrella
Journal:  Plant Signal Behav       Date:  2012-07-27

2.  Genetic manipulation of a high-affinity PHR1 target cis-element to improve phosphorous uptake in Oryza sativa L.

Authors:  Wenyuan Ruan; Meina Guo; Linlin Cai; Hongtao Hu; Changying Li; Yu Liu; Zhongchang Wu; Chuanzao Mao; Keke Yi; Ping Wu; Xiaorong Mo
Journal:  Plant Mol Biol       Date:  2015-02-06       Impact factor: 4.076

3.  Fine-tuning the transcriptional regulatory model of adaptation response to phosphate stress in maize (Zea mays L.).

Authors:  Pranjal Yadava; Vikram Dayaman; Astha Agarwal; Krishan Kumar; Ishwar Singh; Rachana Verma; Tanushri Kaul
Journal:  Physiol Mol Biol Plants       Date:  2022-05-04

4.  Arabidopsis PHL2 and PHR1 Act Redundantly as the Key Components of the Central Regulatory System Controlling Transcriptional Responses to Phosphate Starvation.

Authors:  Lichao Sun; Li Song; Ye Zhang; Zai Zheng; Dong Liu
Journal:  Plant Physiol       Date:  2015-11-19       Impact factor: 8.340

5.  Arabidopsis ferritin 1 (AtFer1) gene regulation by the phosphate starvation response 1 (AtPHR1) transcription factor reveals a direct molecular link between iron and phosphate homeostasis.

Authors:  Marc Bournier; Nicolas Tissot; Stéphane Mari; Jossia Boucherez; Eric Lacombe; Jean-François Briat; Frédéric Gaymard
Journal:  J Biol Chem       Date:  2013-06-20       Impact factor: 5.157

6.  Genome-wide identification and comparative analysis of phosphate starvation-responsive transcription factors in maize and three other gramineous plants.

Authors:  Yunjian Xu; Fang Liu; Guomin Han; Beijiu Cheng
Journal:  Plant Cell Rep       Date:  2018-02-02       Impact factor: 4.570

7.  The Role of the P1BS Element Containing Promoter-Driven Genes in Pi Transport and Homeostasis in Plants.

Authors:  Lukasz Sobkowiak; Dawid Bielewicz; Ewelina M Malecka; Iver Jakobsen; Merete Albrechtsen; Zofia Szweykowska-Kulinska; Andrzej Pacak
Journal:  Front Plant Sci       Date:  2012-03-30       Impact factor: 5.753

Review 8.  Phosphatidic acid, a versatile water-stress signal in roots.

Authors:  Fionn McLoughlin; Christa Testerink
Journal:  Front Plant Sci       Date:  2013-12-23       Impact factor: 5.753

Review 9.  Engineering food crops to grow in harsh environments.

Authors:  Damar López-Arredondo; Sandra Isabel González-Morales; Elohim Bello-Bello; Gerardo Alejo-Jacuinde; Luis Herrera
Journal:  F1000Res       Date:  2015-09-02

10.  Overexpression of VP, a vacuolar H+-pyrophosphatase gene in wheat (Triticum aestivum L.), improves tobacco plant growth under Pi and N deprivation, high salinity, and drought.

Authors:  Xiaojuan Li; Chengjin Guo; Juntao Gu; Weiwei Duan; Miao Zhao; Chunying Ma; Xiaoming Du; Wenjing Lu; Kai Xiao
Journal:  J Exp Bot       Date:  2014-02       Impact factor: 6.992

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