Literature DB >> 22207569

Dissociation chemistry of hydrogen-deficient radical peptide anions.

Benjamin Moore1, Qingyu Sun, Julie C Hsu, Albert H Lee, Gene C Yoo, Tony Ly, Ryan R Julian.   

Abstract

The fragmentation chemistry of anionic deprotonated hydrogen-deficient radical peptides is investigated. Homolytic photodissociation of carbon-iodine bonds with 266 nm light is used to generate the radical species, which are subsequently subjected to collisional activation to induce further dissociation. The charges do not play a central role in the fragmentation chemistry; hence deprotonated peptides that fragment via radical directed dissociation do so via mechanisms which have been reported previously for protonated peptides. However, charge polarity does influence the overall fragmentation of the peptide. For example, the absence of mobile protons favors radical directed dissociation for singly deprotonated peptides. Similarly, a favorable dissociation mechanism initiated at the N-terminus is more notable for anionic peptides where the N-terminus is not protonated (which inhibits the mechanism). In addition, collisional activation of the anionic peptides containing carbon-iodine bonds leads to homolytic cleavage and generation of the radical species, which is not observed for protonated peptides presumably due to competition from lower energy dissociation channels. Finally, for multiply deprotonated radical peptides, electron detachment becomes a competitive channel both during the initial photoactivation and following subsequent collisional activation of the radical. Possible mechanisms that might account for this novel collision-induced electron detachment are discussed.

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Year:  2011        PMID: 22207569     DOI: 10.1007/s13361-011-0318-2

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  34 in total

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Journal:  Biochemistry       Date:  1999-07-13       Impact factor: 3.162

2.  Phosphopeptide analysis by positive and negative ion matrix-assisted laser desorption/ionization mass spectrometry.

Authors:  K Janek; H Wenschuh; M Bienert; E Krause
Journal:  Rapid Commun Mass Spectrom       Date:  2001       Impact factor: 2.419

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Authors:  John H Bowie; Craig S Brinkworth; Suresh Dua
Journal:  Mass Spectrom Rev       Date:  2002 Mar-Apr       Impact factor: 10.946

4.  Is dissociation of peptide radical cations an ergodic process?

Authors:  Julia Laskin; Jean H Futrell; Ivan K Chu
Journal:  J Am Chem Soc       Date:  2007-07-18       Impact factor: 15.419

5.  Site-specific radical directed dissociation of peptides at phosphorylated residues.

Authors:  Jolene K Diedrich; Ryan R Julian
Journal:  J Am Chem Soc       Date:  2008-08-19       Impact factor: 15.419

6.  Backbone and side-chain specific dissociations of z ions from non-tryptic peptides.

Authors:  Thomas W Chung; Frantisek Turecek
Journal:  J Am Soc Mass Spectrom       Date:  2010-02-18       Impact factor: 3.109

7.  Radical conversion and migration in electron capture dissociation.

Authors:  Benjamin N Moore; Tony Ly; Ryan R Julian
Journal:  J Am Chem Soc       Date:  2011-04-15       Impact factor: 15.419

8.  Mobile protons versus mobile radicals: gas-phase unimolecular chemistry of radical cations of cysteine-containing peptides.

Authors:  Adrian K Y Lam; Victor Ryzhov; Richard A J O'Hair
Journal:  J Am Soc Mass Spectrom       Date:  2010-02-01       Impact factor: 3.109

9.  Free radical-induced site-specific peptide cleavage in the gas phase: low-energy collision-induced dissociation in ESI- and MALDI mass spectrometry.

Authors:  Huiyong Yin; Almary Chacon; Ned A Porter; Douglas S Masterson
Journal:  J Am Soc Mass Spectrom       Date:  2007-02-16       Impact factor: 3.109

10.  Effect of the N-terminal basic residue on facile Cα-C bond cleavages of aromatic-containing peptide radical cations.

Authors:  Minijie Xu; Tao Song; Quan Quan; Qiang Hao; Dei-Cai Fang; Chi-Kit Siu; Ivan K Chu
Journal:  Phys Chem Chem Phys       Date:  2011-02-17       Impact factor: 3.676

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  6 in total

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3.  Tyrosine deprotonation yields abundant and selective backbone cleavage in peptide anions upon negative electron transfer dissociation and ultraviolet photodissociation.

Authors:  Jared B Shaw; Aaron R Ledvina; Xing Zhang; Ryan R Julian; Jennifer S Brodbelt
Journal:  J Am Chem Soc       Date:  2012-09-14       Impact factor: 15.419

4.  Development of Novel Free Radical Initiated Peptide Sequencing Reagent: Application to Identification and Characterization of Peptides by Mass Spectrometry.

Authors:  Kaylee Gaspar; Kimberly Fabijanczuk; Tara Otegui; Jose Acosta; Jinshan Gao
Journal:  J Am Soc Mass Spectrom       Date:  2018-12-13       Impact factor: 3.109

5.  Gas-phase peptide sulfinyl radical ions: formation and unimolecular dissociation.

Authors:  Lei Tan; Yu Xia
Journal:  J Am Soc Mass Spectrom       Date:  2012-08-22       Impact factor: 3.109

6.  The specific cleavage of lactone linkage to open-loop in cyclic lipopeptide during negative ESI tandem mass spectrometry: the hydrogen bond interaction effect of 4-ethyl guaiacol.

Authors:  Mengzhe Guo; Youlu Pan; Rong Zhang; Yang Cao; Jianzhong Chen; Yuanjiang Pan
Journal:  PLoS One       Date:  2014-08-21       Impact factor: 3.240

  6 in total

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