Literature DB >> 22206265

Workshop summary: Novel biomarkers for HIV incidence assay development.

Usha K Sharma1, Marco Schito, Alex Welte, Christine Rousseau, Joseph Fitzgibbon, Brandon Keele, Stuart Shapiro, Andrew McMichael, David N Burns.   

Abstract

Reliable methods for measuring human immunodeficiency virus (HIV) incidence are a high priority for HIV prevention. They are particularly important to assess the population-level effectiveness of new prevention strategies, to evaluate the community-wide impact of ongoing prevention programs, and to assess whether a proposed prevention trial can be performed in a timely and cost-efficient manner in a particular population and setting. New incidence assays and algorithms that are accurate, rapid, cost-efficient, and can be performed on easily-obtained specimens are urgently needed. On May 4, 2011, the Division of AIDS (DAIDS), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), sponsored a 1-day workshop to examine strategies for developing new assays to distinguish recent from chronic HIV infections. Participants included leading investigators, clinicians, public health experts, industry, regulatory specialists, and other stakeholders. Immune-based parameters, markers of viral sequence diversity, and other biomarkers such as telomere length were evaluated. Emerging nanotechnology and chip-based diagnostics, including algorithms for performing diverse assays on a single platform, were also reviewed. This report summarizes the presentations, panel discussions, and the consensus reached for pursuing the development of a new generation of HIV incidence assays.

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Year:  2012        PMID: 22206265      PMCID: PMC3358102          DOI: 10.1089/aid.2011.0332

Source DB:  PubMed          Journal:  AIDS Res Hum Retroviruses        ISSN: 0889-2229            Impact factor:   2.205


  33 in total

Review 1.  Applications of electrowetting-based digital microfluidics in clinical diagnostics.

Authors:  Michael G Pollack; Vamsee K Pamula; Vijay Srinivasan; Allen E Eckhardt
Journal:  Expert Rev Mol Diagn       Date:  2011-05       Impact factor: 5.225

Review 2.  An evolutionary review of human telomere biology: the thrifty telomere hypothesis and notes on potential adaptive paternal effects.

Authors:  Dan T A Eisenberg
Journal:  Am J Hum Biol       Date:  2010-12-17       Impact factor: 1.937

3.  Using tests for recent infection to estimate incidence: problems and prospects for HIV.

Authors:  A Welte; T A McWalter; O Laeyendecker; T B Hallett
Journal:  Euro Surveill       Date:  2010-06-17

4.  Designing a genome-based HIV incidence assay with high sensitivity and specificity.

Authors:  Sung Yong Park; Tanzy M T Love; Jeremy Nelson; Sally W Thurston; Alan S Perelson; Ha Youn Lee
Journal:  AIDS       Date:  2011-10-23       Impact factor: 4.177

5.  Wide variation in the multiplicity of HIV-1 infection among injection drug users.

Authors:  Katharine J Bar; Hui Li; Annie Chamberland; Cecile Tremblay; Jean Pierre Routy; Truman Grayson; Chuanxi Sun; Shuyi Wang; Gerald H Learn; Charity J Morgan; Joseph E Schumacher; Barton F Haynes; Brandon F Keele; Beatrice H Hahn; George M Shaw
Journal:  J Virol       Date:  2010-04-07       Impact factor: 5.103

6.  Nanoparticle-based immunoassays for sensitive and early detection of HIV-1 capsid (p24) antigen.

Authors:  Shixing Tang; Indira Hewlett
Journal:  J Infect Dis       Date:  2010-04-15       Impact factor: 5.226

7.  Multiplexed real-time polymerase chain reaction on a digital microfluidic platform.

Authors:  Zhishan Hua; Jeremy L Rouse; Allen E Eckhardt; Vijay Srinivasan; Vamsee K Pamula; Wiley A Schell; Jonathan L Benton; Thomas G Mitchell; Michael G Pollack
Journal:  Anal Chem       Date:  2010-03-15       Impact factor: 6.986

Review 8.  HIV incidence estimation using the BED capture enzyme immunoassay: systematic review and sensitivity analysis.

Authors:  Till Bärnighausen; Thomas A McWalter; Zachary Rosner; Marie-Louise Newell; Alex Welte
Journal:  Epidemiology       Date:  2010-09       Impact factor: 4.822

9.  Analysis of HIV diversity using a high-resolution melting assay.

Authors:  William I Towler; Maria M James; Stuart C Ray; Lei Wang; Deborah Donnell; Anthony Mwatha; Laura Guay; Clemensia Nakabiito; Philippa Musoke; J Brooks Jackson; Susan H Eshleman
Journal:  AIDS Res Hum Retroviruses       Date:  2010-08       Impact factor: 2.205

10.  Compensatory mutation partially restores fitness and delays reversion of escape mutation within the immunodominant HLA-B*5703-restricted Gag epitope in chronic human immunodeficiency virus type 1 infection.

Authors:  Hayley Crawford; Julia G Prado; Alasdair Leslie; Stéphane Hué; Isobella Honeyborne; Sharon Reddy; Mary van der Stok; Zenele Mncube; Christian Brander; Christine Rousseau; James I Mullins; Richard Kaslow; Paul Goepfert; Susan Allen; Eric Hunter; Joseph Mulenga; Photini Kiepiela; Bruce D Walker; Philip J R Goulder
Journal:  J Virol       Date:  2007-05-16       Impact factor: 5.103

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  14 in total

1.  Short Communication: Defining optimality of a test for recent infection for HIV incidence surveillance.

Authors:  Reshma Kassanjee; Thomas A McWalter; Alex Welte
Journal:  AIDS Res Hum Retroviruses       Date:  2013-10-26       Impact factor: 2.205

Review 2.  HIV vaccine development: strategies for preclinical and clinical investigation.

Authors:  Stuart Z Shapiro
Journal:  AIDS Res Hum Retroviruses       Date:  2013-03-08       Impact factor: 2.205

3.  Trends of HIV-1 incidence with credible intervals in Sweden 2002-09 reconstructed using a dynamic model of within-patient IgG growth.

Authors:  Ethan Obie Romero-Severson; Cody Lee Petrie; Edward Ionides; Jan Albert; Thomas Leitner
Journal:  Int J Epidemiol       Date:  2015-07-10       Impact factor: 7.196

4.  Computational analysis of antibody dynamics identifies recent HIV-1 infection.

Authors:  Kelly E Seaton; Nathan A Vandergrift; Aaron W Deal; Wes Rountree; John Bainbridge; Eduard Grebe; David A Anderson; Sheetal Sawant; Xiaoying Shen; Nicole L Yates; Thomas N Denny; Hua-Xin Liao; Barton F Haynes; Merlin L Robb; Neil Parkin; Breno R Santos; Nigel Garrett; Matthew A Price; Denise Naniche; Ann C Duerr; Sheila Keating; Dylan Hampton; Shelley Facente; Kara Marson; Alex Welte; Christopher D Pilcher; Myron S Cohen; Georgia D Tomaras
Journal:  JCI Insight       Date:  2017-12-21

5.  Cross-Sectional HIV Incidence Surveillance: A Benchmarking of Approaches for Estimating the 'Mean Duration of Recent Infection'.

Authors:  Reshma Kassanjee; Daniela De Angelis; Marian Farah; Debra Hanson; Jan Phillipus Lourens Labuschagne; Oliver Laeyendecker; Stéphane Le Vu; Brian Tom; Rui Wang; Alex Welte
Journal:  Stat Commun Infect Dis       Date:  2017-03-14

6.  Recalibration of the limiting antigen avidity EIA to determine mean duration of recent infection in divergent HIV-1 subtypes.

Authors:  Yen T Duong; Reshma Kassanjee; Alex Welte; Meade Morgan; Anindya De; Trudy Dobbs; Erin Rottinghaus; John Nkengasong; Marcel E Curlin; Chonticha Kittinunvorakoon; Boonyos Raengsakulrach; Michael Martin; Kachit Choopanya; Suphak Vanichseni; Yan Jiang; Maofeng Qiu; Haiying Yu; Yan Hao; Neha Shah; Linh-Vi Le; Andrea A Kim; Tuan Anh Nguyen; William Ampofo; Bharat S Parekh
Journal:  PLoS One       Date:  2015-02-24       Impact factor: 3.240

Review 7.  Identifying Recent HIV Infections: From Serological Assays to Genomics.

Authors:  Sikhulile Moyo; Eduan Wilkinson; Vladimir Novitsky; Alain Vandormael; Simani Gaseitsiwe; Max Essex; Susan Engelbrecht; Tulio de Oliveira
Journal:  Viruses       Date:  2015-10-23       Impact factor: 5.048

8.  Towards estimation of HIV-1 date of infection: a time-continuous IgG-model shows that seroconversion does not occur at the midpoint between negative and positive tests.

Authors:  Helena Skar; Jan Albert; Thomas Leitner
Journal:  PLoS One       Date:  2013-04-16       Impact factor: 3.240

9.  Performance of Bio-Rad and Limiting Antigen Avidity Assays in Detecting Recent HIV Infections Using the Quebec Primary HIV-1 Infection Cohort.

Authors:  Bouchra Serhir; Denis Hamel; Florence Doualla-Bell; Jean Pierre Routy; Sylvie-Nancy Beaulac; Mario Legault; Micheline Fauvel; Cécile Tremblay
Journal:  PLoS One       Date:  2016-05-25       Impact factor: 3.240

10.  Development of a New Limiting-Antigen Avidity Dot Immuno-Gold Filtration Assay for HIV-1 Incidence.

Authors:  Zhiyun Gao; Hao Yan; Xia Feng; Lijin Wu; Maofeng Qiu; Wenge Xing; Guiyun Zhang; Zhi Zhang; Yan Jiang
Journal:  PLoS One       Date:  2016-08-11       Impact factor: 3.240

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