Literature DB >> 22199842

2-[4-(2-Hy-droxy-eth-oxy)phenyl]-4,4,5,5-tetra-methyl-2-imidazoline-1-oxyl 3-oxide.

Lin-Lin Jing1, Hui-Ping Ma, Xiao-Fei Fan, Lei He, Zheng-Ping Jia.   

Abstract

In the title compound, C(15)H(21)N(2)O(4), the imidazoline ring displays a twisted conformation. The dihedral angle between the mean plane of the imidazoline ring and the benzene ring is 33.50 (12)°. In the crystal, mol-ecules are connected by O-H⋯O hydrogen bonds, forming a zigzag chain along the c axis. The chains are linked by C-H⋯O and C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 22199842      PMCID: PMC3238993          DOI: 10.1107/S160053681104815X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation of the title compound, see: Ullman et al. (1974 ▶). For biological properties of nitronyl nitroxides, see: Soule et al. (2007 ▶); Blasig et al. (2002 ▶); Qin et al. (2009 ▶); Tanaka et al. (2007 ▶). For coordination properties of nitronyl nitroxides, see: Masuda et al. (2009 ▶). For related structures, see: Wang et al. (2009 ▶); Jing et al. (2009 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For pseudorotation parameters, see: Rao et al. (1981 ▶).

Experimental

Crystal data

C15H21N2O4 M = 293.34 Orthorhombic, a = 8.869 (3) Å b = 16.050 (5) Å c = 20.925 (6) Å V = 2978.7 (16) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.26 × 0.23 × 0.22 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.976, T max = 0.979 20164 measured reflections 2774 independent reflections 1928 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.163 S = 0.95 2774 reflections 195 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681104815X/is5006sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104815X/is5006Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H21N2O4F(000) = 1256
Mr = 293.34Dx = 1.308 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 3005 reflections
a = 8.869 (3) Åθ = 2.5–21.6°
b = 16.050 (5) ŵ = 0.10 mm1
c = 20.925 (6) ÅT = 296 K
V = 2978.7 (16) Å3Block, blue
Z = 80.26 × 0.23 × 0.22 mm
Bruker APEXII CCD diffractometer2774 independent reflections
Radiation source: fine-focus sealed tube1928 reflections with I > 2σ(I)
graphiteRint = 0.054
φ and ω scansθmax = 25.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −10→10
Tmin = 0.976, Tmax = 0.979k = −17→19
20164 measured reflectionsl = −25→25
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.163H-atom parameters constrained
S = 0.95w = 1/[σ2(Fo2) + (0.1P)2 + 0.8575P] where P = (Fo2 + 2Fc2)/3
2774 reflections(Δ/σ)max < 0.001
195 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.8584 (2)1.12763 (14)0.33524 (10)0.0381 (5)
C20.8507 (3)1.05283 (14)0.38244 (10)0.0401 (5)
C30.8131 (2)1.00297 (13)0.27718 (9)0.0338 (5)
C40.7901 (2)0.94682 (13)0.22347 (9)0.0333 (5)
C50.6890 (3)0.88085 (13)0.22601 (10)0.0405 (5)
H50.63430.87190.26330.049*
C60.6678 (3)0.82848 (13)0.17472 (10)0.0405 (5)
H60.59860.78510.17730.049*
C70.7503 (3)0.84085 (13)0.11912 (9)0.0351 (5)
C80.8535 (3)0.90560 (15)0.11621 (10)0.0417 (6)
H80.90980.91360.07920.050*
C90.8733 (3)0.95792 (14)0.16734 (10)0.0399 (6)
H90.94271.00120.16470.048*
C100.6427 (3)0.72306 (15)0.06578 (10)0.0463 (6)
H10A0.54080.73950.07700.056*
H10B0.67780.68290.09710.056*
C110.6449 (3)0.68517 (19)0.00040 (12)0.0586 (7)
H11A0.57800.6374−0.00070.070*
H11B0.60870.7255−0.03050.070*
C120.7205 (3)1.18423 (16)0.33598 (13)0.0550 (7)
H12A0.72751.22360.30160.083*
H12B0.71611.21350.37590.083*
H12C0.63111.15120.33090.083*
C131.0013 (3)1.17980 (17)0.33876 (13)0.0569 (7)
H13A1.08711.14520.33000.085*
H13B1.01061.20340.38070.085*
H13C0.99621.22380.30770.085*
C140.7400 (4)1.06293 (18)0.43721 (12)0.0653 (8)
H14A0.64131.07410.42040.098*
H14B0.77111.10850.46380.098*
H14C0.73751.01260.46200.098*
C151.0041 (3)1.02474 (19)0.40759 (13)0.0638 (8)
H15A0.99290.97330.43050.096*
H15B1.04401.06650.43570.096*
H15C1.07201.01670.37240.096*
N10.8557 (2)1.08321 (11)0.27221 (8)0.0368 (4)
N20.7976 (2)0.98429 (11)0.33930 (8)0.0374 (5)
O10.8756 (2)1.12342 (10)0.21999 (7)0.0558 (5)
O20.7595 (2)0.91285 (10)0.36180 (7)0.0581 (5)
O30.73915 (18)0.79412 (10)0.06528 (7)0.0464 (4)
O40.7906 (3)0.66024 (15)−0.01595 (10)0.0783 (7)
H40.78900.6369−0.05080.117*
U11U22U33U12U13U23
C10.0401 (12)0.0392 (13)0.0350 (11)−0.0033 (10)0.0006 (9)−0.0095 (9)
C20.0493 (13)0.0421 (13)0.0288 (10)−0.0015 (10)−0.0004 (9)−0.0067 (9)
C30.0397 (11)0.0330 (12)0.0289 (10)0.0003 (10)0.0010 (8)0.0005 (8)
C40.0399 (12)0.0319 (11)0.0280 (10)0.0023 (9)−0.0011 (8)0.0003 (8)
C50.0521 (13)0.0402 (13)0.0293 (10)−0.0037 (11)0.0089 (9)−0.0004 (9)
C60.0537 (14)0.0347 (12)0.0331 (11)−0.0076 (10)0.0056 (10)−0.0016 (9)
C70.0421 (12)0.0342 (11)0.0289 (10)0.0037 (9)−0.0009 (9)−0.0045 (8)
C80.0444 (12)0.0491 (14)0.0315 (11)−0.0040 (11)0.0113 (9)−0.0042 (9)
C90.0422 (13)0.0423 (13)0.0352 (11)−0.0078 (10)0.0065 (9)−0.0050 (9)
C100.0536 (14)0.0489 (14)0.0363 (11)−0.0112 (11)−0.0006 (10)−0.0037 (10)
C110.0661 (18)0.0676 (18)0.0420 (14)−0.0164 (14)−0.0063 (12)−0.0132 (12)
C120.0545 (16)0.0485 (15)0.0621 (16)0.0082 (12)−0.0003 (12)−0.0064 (12)
C130.0537 (16)0.0619 (17)0.0550 (15)−0.0171 (13)−0.0008 (12)−0.0081 (13)
C140.092 (2)0.0601 (17)0.0438 (14)−0.0058 (15)0.0248 (14)−0.0106 (12)
C150.0679 (18)0.0708 (19)0.0527 (15)0.0060 (15)−0.0233 (14)0.0018 (13)
N10.0449 (11)0.0363 (10)0.0293 (9)−0.0035 (8)0.0014 (7)−0.0010 (7)
N20.0505 (11)0.0355 (10)0.0261 (8)−0.0023 (8)0.0013 (7)0.0005 (7)
O10.0892 (14)0.0420 (10)0.0363 (9)−0.0110 (9)0.0059 (8)0.0083 (7)
O20.0993 (14)0.0428 (10)0.0322 (8)−0.0155 (10)0.0016 (8)0.0072 (7)
O30.0640 (11)0.0435 (9)0.0317 (8)−0.0112 (8)0.0074 (7)−0.0106 (6)
O40.0952 (17)0.0864 (16)0.0532 (12)0.0100 (13)0.0002 (10)−0.0280 (10)
C1—N11.499 (3)C10—C111.497 (3)
C1—C131.520 (3)C10—H10A0.9700
C1—C121.524 (3)C10—H10B0.9700
C1—C21.556 (3)C11—O41.395 (3)
C2—N21.499 (3)C11—H11A0.9700
C2—C141.518 (3)C11—H11B0.9700
C2—C151.527 (4)C12—H12A0.9600
C3—N21.341 (3)C12—H12B0.9600
C3—N11.346 (3)C12—H12C0.9600
C3—C41.455 (3)C13—H13A0.9600
C4—C51.389 (3)C13—H13B0.9600
C4—C91.398 (3)C13—H13C0.9600
C5—C61.376 (3)C14—H14A0.9600
C5—H50.9300C14—H14B0.9600
C6—C71.389 (3)C14—H14C0.9600
C6—H60.9300C15—H15A0.9600
C7—O31.357 (2)C15—H15B0.9600
C7—C81.386 (3)C15—H15C0.9600
C8—C91.371 (3)N1—O11.281 (2)
C8—H80.9300N2—O21.285 (2)
C9—H90.9300O4—H40.8200
C10—O31.426 (3)
N1—C1—C13108.57 (17)O4—C11—C10110.7 (2)
N1—C1—C12106.21 (18)O4—C11—H11A109.5
C13—C1—C12109.9 (2)C10—C11—H11A109.5
N1—C1—C2101.00 (16)O4—C11—H11B109.5
C13—C1—C2115.53 (19)C10—C11—H11B109.5
C12—C1—C2114.71 (19)H11A—C11—H11B108.1
N2—C2—C14109.3 (2)C1—C12—H12A109.5
N2—C2—C15105.71 (19)C1—C12—H12B109.5
C14—C2—C15110.4 (2)H12A—C12—H12B109.5
N2—C2—C1101.41 (16)C1—C12—H12C109.5
C14—C2—C1115.2 (2)H12A—C12—H12C109.5
C15—C2—C1114.0 (2)H12B—C12—H12C109.5
N2—C3—N1108.50 (17)C1—C13—H13A109.5
N2—C3—C4126.58 (19)C1—C13—H13B109.5
N1—C3—C4124.91 (18)H13A—C13—H13B109.5
C5—C4—C9118.04 (18)C1—C13—H13C109.5
C5—C4—C3122.21 (18)H13A—C13—H13C109.5
C9—C4—C3119.75 (19)H13B—C13—H13C109.5
C6—C5—C4121.61 (19)C2—C14—H14A109.5
C6—C5—H5119.2C2—C14—H14B109.5
C4—C5—H5119.2H14A—C14—H14B109.5
C5—C6—C7119.6 (2)C2—C14—H14C109.5
C5—C6—H6120.2H14A—C14—H14C109.5
C7—C6—H6120.2H14B—C14—H14C109.5
O3—C7—C8115.21 (18)C2—C15—H15A109.5
O3—C7—C6125.3 (2)C2—C15—H15B109.5
C8—C7—C6119.47 (18)H15A—C15—H15B109.5
C9—C8—C7120.63 (19)C2—C15—H15C109.5
C9—C8—H8119.7H15A—C15—H15C109.5
C7—C8—H8119.7H15B—C15—H15C109.5
C8—C9—C4120.6 (2)O1—N1—C3125.90 (17)
C8—C9—H9119.7O1—N1—C1120.55 (17)
C4—C9—H9119.7C3—N1—C1113.06 (16)
O3—C10—C11108.08 (19)O2—N2—C3125.57 (17)
O3—C10—H10A110.1O2—N2—C2121.12 (16)
C11—C10—H10A110.1C3—N2—C2112.80 (17)
O3—C10—H10B110.1C7—O3—C10118.67 (16)
C11—C10—H10B110.1C11—O4—H4109.5
H10A—C10—H10B108.4
N1—C1—C2—N2−16.7 (2)N2—C3—N1—O1−177.2 (2)
C13—C1—C2—N2−133.60 (19)C4—C3—N1—O13.5 (3)
C12—C1—C2—N297.0 (2)N2—C3—N1—C1−5.2 (2)
N1—C1—C2—C14−134.5 (2)C4—C3—N1—C1175.45 (19)
C13—C1—C2—C14108.6 (2)C13—C1—N1—O1−51.1 (3)
C12—C1—C2—C14−20.8 (3)C12—C1—N1—O167.0 (2)
N1—C1—C2—C1596.4 (2)C2—C1—N1—O1−172.97 (19)
C13—C1—C2—C15−20.5 (3)C13—C1—N1—C3136.5 (2)
C12—C1—C2—C15−149.9 (2)C12—C1—N1—C3−105.4 (2)
N2—C3—C4—C529.5 (3)C2—C1—N1—C314.6 (2)
N1—C3—C4—C5−151.3 (2)N1—C3—N2—O2−179.3 (2)
N2—C3—C4—C9−149.5 (2)C4—C3—N2—O20.0 (4)
N1—C3—C4—C929.7 (3)N1—C3—N2—C2−7.4 (2)
C9—C4—C5—C6−1.3 (3)C4—C3—N2—C2171.86 (19)
C3—C4—C5—C6179.6 (2)C14—C2—N2—O2−49.8 (3)
C4—C5—C6—C70.7 (4)C15—C2—N2—O269.0 (3)
C5—C6—C7—O3−179.5 (2)C1—C2—N2—O2−171.79 (19)
C5—C6—C7—C80.3 (3)C14—C2—N2—C3138.0 (2)
O3—C7—C8—C9179.1 (2)C15—C2—N2—C3−103.3 (2)
C6—C7—C8—C9−0.8 (3)C1—C2—N2—C315.9 (2)
C7—C8—C9—C40.2 (3)C8—C7—O3—C10176.0 (2)
C5—C4—C9—C80.8 (3)C6—C7—O3—C10−4.1 (3)
C3—C4—C9—C8179.9 (2)C11—C10—O3—C7177.4 (2)
O3—C10—C11—O460.5 (3)
Cg2 is the centroid of the benzene C4–C9 ring.
D—H···AD—HH···AD···AD—H···A
O4—H4···O2i0.822.012.828 (3)173
C12—H12C···O1ii0.962.543.418 (3)152
C15—H15C···Cg2iii0.962.803.570 (3)138
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the benzene C4–C9 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O2i0.822.012.828 (3)173
C12—H12C⋯O1ii0.962.543.418 (3)152
C15—H15CCg2iii0.962.803.570 (3)138

Symmetry codes: (i) ; (ii) ; (iii) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Nitronyl nitroxides, a novel group of protective agents against oxidative stress in endothelial cells forming the blood-brain barrier.

Authors:  I E Blasig; K Mertsch; R F Haseloff
Journal:  Neuropharmacology       Date:  2002-11       Impact factor: 5.250

3.  4,4,5,5-Tetra-methyl-2-(3,4,5-trimethoxy-phen-yl)imidazolidine-1-oxyl 3-oxide.

Authors:  Hai-Bo Wang; Lin-Lin Jing; Peng Gao; Xiao-Li Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08

4.  Triphenyl-phosphine oxide-2-(4-hydroxy-benzen-yl)-4,4,5,5-tetra-methyl-imidazolidine-1-oxyl 3-oxide (1/1).

Authors:  Lin-Lin Jing; Hai-Bo Wang; Xiao-Li Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-12

Review 5.  The chemistry and biology of nitroxide compounds.

Authors:  Benjamin P Soule; Fuminori Hyodo; Ken-Ichiro Matsumoto; Nicole L Simone; John A Cook; Murali C Krishna; James B Mitchell
Journal:  Free Radic Biol Med       Date:  2007-03-12       Impact factor: 7.376

6.  A new ferrimagnet based on a radical-substituted radical cation salt.

Authors:  Yuki Masuda; Masato Kuratsu; Shuichi Suzuki; Masatoshi Kozaki; Daisuke Shiomi; Kazunobu Sato; Takeji Takui; Yuko Hosokoshi; Xiao-Zheng Lan; Yuji Miyazaki; Akira Inaba; Keiji Okada
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  1 in total

1.  2-[3-Hy-droxy-4-(2-hy-droxy-eth-oxy)phen-yl]-4,4,5,5-tetra-methyl-2-imidazoline-1-oxyl 3-oxide.

Authors:  Hui-Ping Ma; Lin-Lin Jing; Lei He; Peng-Cheng Fan; Zheng-Ping Jia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-23
  1 in total

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