Literature DB >> 22199838

1-Methyl-3-trifluoro-methyl-5-[(3-chloro-phen-yl)sulfanyl]-1H-pyrazole-4-carbaldehyde O-(4-chloro-benzo-yl)oxime.

Hong Dai1, Hai-Jun Zhang, Lei Shi, Kun-Peng Luo, Yu-Jun Shi.   

Abstract

In the title compound, C(19)H(12)Cl(2)F(3)N(3)O(2)S, the 3-chloro-phenyl and 4-chloro-phenyl rings form dihedral angles 89.5 (2) and 11.4 (2)°, respectively, with the pyrazole ring. In the crystal, mol-ecules related by translation along the a axis are linked into chains via C-H⋯N hydrogen bonds.

Entities:  

Year:  2011        PMID: 22199838      PMCID: PMC3238989          DOI: 10.1107/S1600536811047970

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of a related pyrazole oxime studied recently by our group, see: Dai et al. (2011 ▶).

Experimental

Crystal data

C19H12Cl2F3N3O2S M = 474.28 Monoclinic, a = 8.1405 (16) Å b = 18.680 (4) Å c = 13.737 (3) Å β = 96.10 (3)° V = 2077.0 (7) Å3 Z = 4 Mo Kα radiation μ = 0.46 mm−1 T = 113 K 0.18 × 0.16 × 0.12 mm

Data collection

Rigaku Saturn CCD area detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2008 ▶) T min = 0.922, T max = 0.947 11802 measured reflections 3654 independent reflections 2794 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.137 S = 1.10 3654 reflections 273 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.38 e Å−3 Data collection: CrystalClear (Rigaku, 2008 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) r80421a, I. DOI: 10.1107/S1600536811047970/cv5193sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047970/cv5193Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811047970/cv5193Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H12Cl2F3N3O2SF(000) = 960
Mr = 474.28Dx = 1.517 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4368 reflections
a = 8.1405 (16) Åθ = 2.2–27.9°
b = 18.680 (4) ŵ = 0.46 mm1
c = 13.737 (3) ÅT = 113 K
β = 96.10 (3)°Monoclinic, colourless
V = 2077.0 (7) Å30.18 × 0.16 × 0.12 mm
Z = 4
Rigaku Saturn CCD area detector diffractometer3654 independent reflections
Radiation source: rotating anode2794 reflections with I > 2σ(I)
confocalRint = 0.039
Detector resolution: 7.31 pixels mm-1θmax = 25.0°, θmin = 2.2°
ω and φ scansh = −9→9
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008)k = −22→22
Tmin = 0.922, Tmax = 0.947l = −14→16
11802 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H-atom parameters constrained
wR(F2) = 0.137w = 1/[σ2(Fo2) + (0.0717P)2 + 0.2323P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
3654 reflectionsΔρmax = 0.39 e Å3
273 parametersΔρmin = −0.38 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.020 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.09484 (13)0.84104 (6)0.56388 (10)0.1131 (4)
Cl21.29709 (11)0.74602 (6)1.34884 (7)0.0961 (4)
S10.64859 (10)1.00969 (4)0.71200 (6)0.0663 (3)
F10.1729 (2)0.85215 (8)0.92153 (14)0.0775 (5)
F2−0.0064 (2)0.93357 (11)0.88380 (14)0.0867 (6)
F30.1826 (2)0.94978 (10)1.00144 (12)0.0778 (5)
O10.6832 (2)0.87708 (10)1.04766 (12)0.0532 (5)
O20.5304 (3)0.84250 (12)1.16752 (17)0.0833 (7)
N10.3126 (3)1.00802 (11)0.71276 (16)0.0566 (6)
N20.1875 (3)0.98695 (11)0.76284 (16)0.0543 (6)
N30.5309 (3)0.89838 (12)0.99338 (15)0.0538 (6)
C10.5668 (4)0.88041 (15)0.6144 (2)0.0607 (7)
H10.45690.88860.62380.073*
C20.6110 (4)0.81988 (17)0.5655 (2)0.0688 (8)
H20.52970.78730.54230.083*
C30.7709 (4)0.80690 (17)0.5504 (2)0.0715 (8)
H30.79930.76570.51800.086*
C40.8894 (4)0.85576 (16)0.5841 (2)0.0654 (8)
C50.8510 (3)0.91618 (15)0.63472 (18)0.0584 (7)
H50.93360.94790.65870.070*
C60.6885 (3)0.92892 (14)0.64942 (16)0.0508 (6)
C70.4631 (3)0.98935 (13)0.75808 (18)0.0492 (6)
C80.4342 (3)0.95423 (12)0.84390 (16)0.0434 (6)
C90.2602 (3)0.95408 (12)0.84192 (16)0.0433 (6)
C100.1528 (3)0.92283 (13)0.91187 (19)0.0518 (6)
C110.5643 (3)0.92724 (12)0.91488 (18)0.0468 (6)
H110.67390.93130.90230.056*
C120.6607 (3)0.84774 (13)1.13649 (19)0.0513 (6)
C130.8222 (3)0.82499 (13)1.18756 (18)0.0473 (6)
C140.8200 (4)0.77728 (14)1.2655 (2)0.0584 (7)
H140.71970.76111.28380.070*
C150.9663 (4)0.75393 (14)1.3154 (2)0.0629 (8)
H150.96510.72201.36730.076*
C161.1137 (3)0.77827 (15)1.2879 (2)0.0582 (7)
C171.1198 (3)0.82612 (14)1.2119 (2)0.0555 (7)
H171.22060.84251.19460.067*
C180.9727 (3)0.84924 (13)1.16177 (19)0.0517 (6)
H180.97490.88141.11020.062*
C190.2742 (5)1.0461 (2)0.6195 (2)0.0884 (11)
H19A0.27621.01300.56620.133*
H19B0.35491.08300.61390.133*
H19C0.16651.06730.61760.133*
U11U22U33U12U13U23
Cl10.0650 (6)0.1302 (9)0.1451 (10)0.0138 (5)0.0163 (6)−0.0332 (7)
Cl20.0651 (6)0.1262 (8)0.0921 (6)0.0249 (5)−0.0154 (5)0.0214 (5)
S10.0663 (5)0.0631 (5)0.0734 (5)−0.0207 (3)0.0257 (4)−0.0077 (3)
F10.0803 (13)0.0574 (10)0.0992 (13)−0.0039 (8)0.0302 (10)0.0083 (8)
F20.0379 (9)0.1262 (16)0.0967 (13)0.0030 (9)0.0103 (9)0.0184 (11)
F30.0809 (13)0.0988 (13)0.0579 (10)−0.0146 (10)0.0263 (9)−0.0142 (9)
O10.0370 (10)0.0717 (11)0.0500 (9)0.0044 (8)0.0002 (8)0.0088 (8)
O20.0458 (13)0.1175 (18)0.0892 (15)0.0122 (11)0.0195 (12)0.0396 (13)
N10.0603 (15)0.0591 (13)0.0498 (12)0.0021 (11)0.0025 (11)0.0099 (10)
N20.0485 (13)0.0582 (12)0.0553 (13)0.0069 (10)0.0016 (11)0.0036 (10)
N30.0374 (12)0.0684 (14)0.0536 (12)0.0051 (10)−0.0040 (10)0.0042 (10)
C10.0530 (17)0.0707 (17)0.0595 (16)−0.0153 (13)0.0109 (13)−0.0025 (13)
C20.072 (2)0.0704 (18)0.0629 (17)−0.0216 (16)0.0033 (16)−0.0037 (14)
C30.080 (2)0.0724 (19)0.0627 (18)−0.0051 (17)0.0113 (16)−0.0053 (15)
C40.0582 (19)0.079 (2)0.0587 (16)0.0060 (15)0.0049 (14)0.0002 (14)
C50.0490 (17)0.0761 (18)0.0486 (14)−0.0088 (13)−0.0013 (12)0.0014 (13)
C60.0522 (16)0.0591 (15)0.0413 (13)−0.0098 (12)0.0052 (12)0.0070 (11)
C70.0483 (16)0.0499 (13)0.0498 (14)−0.0037 (11)0.0070 (12)0.0012 (11)
C80.0411 (14)0.0457 (12)0.0432 (12)−0.0016 (10)0.0038 (10)−0.0044 (10)
C90.0401 (14)0.0469 (12)0.0424 (12)0.0035 (10)0.0017 (10)−0.0022 (10)
C100.0383 (15)0.0564 (15)0.0611 (16)0.0019 (11)0.0067 (12)−0.0012 (12)
C110.0360 (13)0.0532 (14)0.0509 (14)−0.0006 (10)0.0026 (11)−0.0028 (11)
C120.0453 (16)0.0537 (14)0.0549 (15)−0.0002 (11)0.0050 (13)0.0065 (11)
C130.0425 (15)0.0488 (13)0.0505 (13)0.0023 (11)0.0048 (11)0.0007 (11)
C140.0511 (16)0.0626 (16)0.0623 (16)0.0010 (13)0.0105 (13)0.0150 (13)
C150.062 (2)0.0667 (17)0.0598 (17)0.0091 (14)0.0049 (14)0.0170 (13)
C160.0517 (17)0.0651 (16)0.0554 (15)0.0111 (13)−0.0057 (13)0.0009 (13)
C170.0418 (15)0.0617 (16)0.0627 (16)−0.0018 (12)0.0036 (13)−0.0007 (13)
C180.0469 (16)0.0531 (14)0.0547 (14)−0.0015 (11)0.0032 (12)0.0072 (11)
C190.103 (3)0.096 (2)0.0642 (19)0.011 (2)0.0001 (18)0.0349 (18)
Cl1—C41.746 (3)C4—C51.379 (4)
Cl2—C161.740 (3)C5—C61.380 (4)
S1—C71.740 (3)C5—H50.9300
S1—C61.783 (3)C7—C81.391 (3)
F1—C101.335 (3)C8—C91.414 (3)
F2—C101.327 (3)C8—C111.451 (3)
F3—C101.328 (3)C9—C101.486 (4)
O1—C121.368 (3)C11—H110.9300
O1—N31.434 (2)C12—C131.485 (3)
O2—C121.189 (3)C13—C181.387 (4)
N1—N21.347 (3)C13—C141.394 (4)
N1—C71.359 (3)C14—C151.381 (4)
N1—C191.469 (3)C14—H140.9300
N2—C91.331 (3)C15—C161.373 (4)
N3—C111.261 (3)C15—H150.9300
C1—C21.382 (4)C16—C171.380 (4)
C1—C61.390 (4)C17—C181.385 (4)
C1—H10.9300C17—H170.9300
C2—C31.361 (4)C18—H180.9300
C2—H20.9300C19—H19A0.9600
C3—C41.372 (4)C19—H19B0.9600
C3—H30.9300C19—H19C0.9600
C7—S1—C6101.54 (12)F2—C10—F1106.5 (2)
C12—O1—N3112.63 (19)F3—C10—F1105.9 (2)
N2—N1—C7112.6 (2)F2—C10—C9112.1 (2)
N2—N1—C19119.0 (3)F3—C10—C9112.8 (2)
C7—N1—C19128.4 (3)F1—C10—C9112.2 (2)
C9—N2—N1104.9 (2)N3—C11—C8121.0 (2)
C11—N3—O1108.1 (2)N3—C11—H11119.5
C2—C1—C6119.3 (3)C8—C11—H11119.5
C2—C1—H1120.4O2—C12—O1124.2 (2)
C6—C1—H1120.4O2—C12—C13125.9 (2)
C3—C2—C1121.5 (3)O1—C12—C13109.9 (2)
C3—C2—H2119.3C18—C13—C14119.2 (2)
C1—C2—H2119.3C18—C13—C12123.2 (2)
C2—C3—C4118.7 (3)C14—C13—C12117.6 (2)
C2—C3—H3120.7C15—C14—C13120.2 (3)
C4—C3—H3120.7C15—C14—H14119.9
C3—C4—C5121.7 (3)C13—C14—H14119.9
C3—C4—Cl1119.5 (3)C16—C15—C14119.4 (3)
C5—C4—Cl1118.8 (2)C16—C15—H15120.3
C4—C5—C6119.1 (3)C14—C15—H15120.3
C4—C5—H5120.4C15—C16—C17121.7 (2)
C6—C5—H5120.4C15—C16—Cl2118.9 (2)
C5—C6—C1119.7 (3)C17—C16—Cl2119.4 (2)
C5—C6—S1116.3 (2)C16—C17—C18118.6 (3)
C1—C6—S1124.0 (2)C16—C17—H17120.7
N1—C7—C8106.5 (2)C18—C17—H17120.7
N1—C7—S1123.51 (19)C17—C18—C13120.8 (2)
C8—C7—S1130.0 (2)C17—C18—H18119.6
C7—C8—C9104.1 (2)C13—C18—H18119.6
C7—C8—C11123.8 (2)N1—C19—H19A109.5
C9—C8—C11132.1 (2)N1—C19—H19B109.5
N2—C9—C8111.9 (2)H19A—C19—H19B109.5
N2—C9—C10117.9 (2)N1—C19—H19C109.5
C8—C9—C10130.2 (2)H19A—C19—H19C109.5
F2—C10—F3106.8 (2)H19B—C19—H19C109.5
C7—N1—N2—C90.0 (3)C11—C8—C9—N2178.2 (2)
C19—N1—N2—C9179.5 (2)C7—C8—C9—C10178.2 (2)
C12—O1—N3—C11177.4 (2)C11—C8—C9—C10−2.8 (4)
C6—C1—C2—C3−0.3 (4)N2—C9—C10—F2−0.6 (3)
C1—C2—C3—C4−0.7 (5)C8—C9—C10—F2−179.5 (2)
C2—C3—C4—C51.8 (5)N2—C9—C10—F3−121.2 (2)
C2—C3—C4—Cl1−179.0 (2)C8—C9—C10—F359.9 (3)
C3—C4—C5—C6−2.0 (4)N2—C9—C10—F1119.2 (2)
Cl1—C4—C5—C6178.8 (2)C8—C9—C10—F1−59.7 (3)
C4—C5—C6—C10.9 (4)O1—N3—C11—C8179.75 (19)
C4—C5—C6—S1−178.0 (2)C7—C8—C11—N3177.1 (2)
C2—C1—C6—C50.2 (4)C9—C8—C11—N3−1.7 (4)
C2—C1—C6—S1179.0 (2)N3—O1—C12—O2−2.5 (4)
C7—S1—C6—C5−157.1 (2)N3—O1—C12—C13178.37 (19)
C7—S1—C6—C124.0 (2)O2—C12—C13—C18−161.7 (3)
N2—N1—C7—C8−0.5 (3)O1—C12—C13—C1817.4 (3)
C19—N1—C7—C8−179.9 (3)O2—C12—C13—C1417.8 (4)
N2—N1—C7—S1−179.46 (17)O1—C12—C13—C14−163.0 (2)
C19—N1—C7—S11.1 (4)C18—C13—C14—C15−0.8 (4)
C6—S1—C7—N1−96.1 (2)C12—C13—C14—C15179.7 (3)
C6—S1—C7—C885.2 (2)C13—C14—C15—C160.2 (4)
N1—C7—C8—C90.7 (2)C14—C15—C16—C170.5 (4)
S1—C7—C8—C9179.61 (19)C14—C15—C16—Cl2−177.8 (2)
N1—C7—C8—C11−178.3 (2)C15—C16—C17—C18−0.7 (4)
S1—C7—C8—C110.6 (4)Cl2—C16—C17—C18177.6 (2)
N1—N2—C9—C80.5 (3)C16—C17—C18—C130.2 (4)
N1—N2—C9—C10−178.6 (2)C14—C13—C18—C170.6 (4)
C7—C8—C9—N2−0.8 (3)C12—C13—C18—C17−179.9 (2)
D—H···AD—HH···AD···AD—H···A
C5—H5···N2i0.932.493.365 (4)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯N2i0.932.493.365 (4)156

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-1-Methyl-5-(3-methyl-4-chloro-phen-oxy)-3-trifluoro-meth-yl-1H-pyrazole-4-carbaldehyde O-acetyl-oxime.

Authors:  Hong Dai; Yan-Fei Shen; Jiao Chen; Hong-Lian Chen; Yong-Jun Shen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-26
  2 in total

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